GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002516-TA|BGIBMGA002516-PA|undefined
         (201 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           27   0.29 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   3.6  

>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 55 RHVNHITYFDNFYTNIPLLHYLTN-EGIYC 83
          R +  +   D FYT+  LL+YL   EG++C
Sbjct: 42 RELTGVHLLDRFYTHSALLNYLFGMEGVWC 71


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 115 HENVASYEGQELSATSWKDNKQVLLLSTYVGAEPADTITRYEK 157
           ++ +A+Y  QE +    KD K+ L L   +    AD I  Y++
Sbjct: 85  YDMLAAYYVQEANREKSKDKKRDLFLKATLLYTTADKIIMYDQ 127


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.137    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,909
Number of Sequences: 2123
Number of extensions: 8475
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 2
length of query: 201
length of database: 516,269
effective HSP length: 61
effective length of query: 140
effective length of database: 386,766
effective search space: 54147240
effective search space used: 54147240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)