Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002516-TA|BGIBMGA002516-PA|undefined
(201 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063690-1|AAH63690.1| 593|Homo sapiens piggyBac transposable e... 80 6e-15
BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein. 80 6e-15
BC028954-1|AAH28954.2| 593|Homo sapiens piggyBac transposable e... 80 6e-15
AL138760-1|CAH70290.1| 593|Homo sapiens piggyBac transposable e... 79 1e-14
BX647065-1|CAE46192.1| 341|Homo sapiens hypothetical protein pr... 72 2e-12
BC063785-1|AAH63785.1| 592|Homo sapiens piggyBac transposable e... 72 2e-12
AL672183-3|CAI18712.1| 592|Homo sapiens piggyBac transposable e... 72 2e-12
AL672183-2|CAI18711.1| 341|Homo sapiens piggyBac transposable e... 72 2e-12
D88259-1|BAB46919.1| 809|Homo sapiens cerebral protein-4 protein. 63 6e-10
BC128585-1|AAI28586.1| 809|Homo sapiens piggyBac transposable e... 63 6e-10
AL021997-3|CAD21704.2| 809|Homo sapiens piggyBac transposable e... 63 6e-10
AK223446-1|BAD97166.1| 809|Homo sapiens piggyBac transposable e... 63 6e-10
BC130441-1|AAI30442.1| 585|Homo sapiens piggyBac transposable e... 49 1e-05
AK094816-1|BAC04428.1| 332|Homo sapiens protein ( Homo sapiens ... 49 1e-05
AK057200-1|BAB71379.1| 581|Homo sapiens DR1) mRNA. protein. 49 1e-05
AY971073-1|AAY18494.1| 158|Homo sapiens immunoglobulin alpha he... 32 1.2
AJ276986-1|CAC81830.1| 126|Homo sapiens immunoglobulin heavy ch... 32 1.2
AY685326-1|AAT96477.1| 118|Homo sapiens immunoglobulin variable... 31 3.6
BC031039-1|AAH31039.1| 749|Homo sapiens EF-hand domain (C-termi... 30 4.8
AL359744-3|CAI40213.1| 777|Homo sapiens EF-hand domain (C-termi... 30 4.8
AL359744-2|CAI40212.1| 729|Homo sapiens EF-hand domain (C-termi... 30 4.8
AL359744-1|CAI40211.1| 162|Homo sapiens EF-hand domain (C-termi... 30 4.8
AL133344-3|CAI42234.1| 777|Homo sapiens EF-hand domain (C-termi... 30 4.8
AL133344-2|CAI42233.1| 729|Homo sapiens EF-hand domain (C-termi... 30 4.8
AL133344-1|CAI42232.1| 162|Homo sapiens EF-hand domain (C-termi... 30 4.8
AK026254-1|BAB15413.1| 162|Homo sapiens protein ( Homo sapiens ... 30 4.8
DQ524158-1|ABI35670.1| 118|Homo sapiens immunoglobulin heavy ch... 30 6.3
AY607337-1|AAT01959.1| 113|Homo sapiens immunoglobulin heavy ch... 30 6.3
S49816-1|AAB24246.1| 253|Homo sapiens thyrotropin receptor-I pr... 29 8.4
S45272-1|AAB23390.2| 253|Homo sapiens thyrotropin receptor prot... 29 8.4
M73747-1|AAA70232.1| 763|Homo sapiens thyroid stimulating hormo... 29 8.4
M32215-1|AAA61236.1| 764|Homo sapiens thyroid stimulatory hormo... 29 8.4
M31774-1|AAA36783.1| 764|Homo sapiens protein ( Human thyrotrop... 29 8.4
DQ523962-1|ABI35474.1| 115|Homo sapiens immunoglobulin heavy ch... 29 8.4
BC141970-1|AAI41971.1| 253|Homo sapiens thyroid stimulating hor... 29 8.4
BC127628-1|AAI27629.1| 274|Homo sapiens TSHR protein protein. 29 8.4
BC120973-1|AAI20974.1| 253|Homo sapiens thyroid stimulating hor... 29 8.4
BC120972-1|AAI20973.1| 231|Homo sapiens TSHR protein protein. 29 8.4
BC108653-1|AAI08654.1| 253|Homo sapiens thyroid stimulating hor... 29 8.4
BC063613-1|AAH63613.1| 253|Homo sapiens thyroid stimulating hor... 29 8.4
BC024205-1|AAH24205.1| 253|Homo sapiens thyroid stimulating hor... 29 8.4
BC009237-1|AAH09237.1| 253|Homo sapiens thyroid stimulating hor... 29 8.4
AY429111-1|AAR07906.1| 764|Homo sapiens thyroid stimulating hor... 29 8.4
AB209207-1|BAD92444.1| 770|Homo sapiens thyroid stimulating hor... 29 8.4
>BC063690-1|AAH63690.1| 593|Homo sapiens piggyBac transposable
element derived 3 protein.
Length = 593
Score = 79.8 bits (188), Expect = 6e-15
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF+T+I LL L++ G GTV+++ + K +P + ++ RGT+ + +
Sbjct: 351 FNNFFTSIALLDKLSSMGHQATGTVRKDHIDK---VPLESDVALKKKERGTFDYRI---D 404
Query: 123 GQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHMGGVD 182
G+ W DN V + S+ G P ++RY +KLK +QV P +I YN MGGVD
Sbjct: 405 GKGNIVCRWNDNSVVTVASSGAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYNQFMGGVD 464
Query: 183 LMDSFIGRCRIRI 195
D I + R I
Sbjct: 465 RADENIDKYRASI 477
>BC034479-1|AAH34479.1| 1061|Homo sapiens PGBD3 protein protein.
Length = 1061
Score = 79.8 bits (188), Expect = 6e-15
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF+T+I LL L++ G GTV+++ + K +P + ++ RGT+ + +
Sbjct: 819 FNNFFTSIALLDKLSSMGHQATGTVRKDHIDK---VPLESDVALKKKERGTFDYRI---D 872
Query: 123 GQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHMGGVD 182
G+ W DN V + S+ G P ++RY +KLK +QV P +I YN MGGVD
Sbjct: 873 GKGNIVCRWNDNSVVTVASSGAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYNQFMGGVD 932
Query: 183 LMDSFIGRCRIRI 195
D I + R I
Sbjct: 933 RADENIDKYRASI 945
>BC028954-1|AAH28954.2| 593|Homo sapiens piggyBac transposable
element derived 3 protein.
Length = 593
Score = 79.8 bits (188), Expect = 6e-15
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF+T+I LL L++ G GTV+++ + K +P + ++ RGT+ + +
Sbjct: 351 FNNFFTSIALLDKLSSMGHQATGTVRKDHIDK---VPLESDVALKKKERGTFDYRI---D 404
Query: 123 GQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHMGGVD 182
G+ W DN V + S+ G P ++RY +KLK +QV P +I YN MGGVD
Sbjct: 405 GKGNIVCRWNDNSVVTVASSGAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYNQFMGGVD 464
Query: 183 LMDSFIGRCRIRI 195
D I + R I
Sbjct: 465 RADENIDKYRASI 477
>AL138760-1|CAH70290.1| 593|Homo sapiens piggyBac transposable
element derived 3 protein.
Length = 593
Score = 78.6 bits (185), Expect = 1e-14
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF+T+I LL L++ G GTV+++ + + +P + ++ RGT+ + +
Sbjct: 351 FNNFFTSIALLDKLSSMGHQATGTVRKDHIDR---VPLESDVALKKKERGTFDYRI---D 404
Query: 123 GQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHMGGVD 182
G+ W DN V + S+ G P ++RY +KLK +QV P +I YN MGGVD
Sbjct: 405 GKGNIVCRWNDNSVVTVASSGAGIHPLCLVSRYSQKLKKKIQVQQPNMIKVYNQFMGGVD 464
Query: 183 LMDSFIGRCRIRI 195
D I + R I
Sbjct: 465 RADENIDKYRASI 477
>BX647065-1|CAE46192.1| 341|Homo sapiens hypothetical protein
protein.
Length = 341
Score = 71.7 bits (168), Expect = 2e-12
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 59 HITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENV 118
HI +FD +T++ L+ L +G+ GTV+ R + C L + +E+ K + RG++ V
Sbjct: 96 HI-FFDKVFTSVKLMSILRKKGVKATGTVREYRTER-CPLKDPKELKK--MKRGSFDYKV 151
Query: 119 ASYEGQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHM 178
E +E+ W D+ V + S VG EP +R+ K QV P ++ Y +
Sbjct: 152 D--ESEEIIVCRWHDSSVVNICSNAVGIEPVRLTSRHSGAAKTRTQVHQPSLVKLYQEKV 209
Query: 179 GGVDLMDSFIGRCRIRI 195
GGV MD I + +++I
Sbjct: 210 GGVGRMDQNIAKYKVKI 226
>BC063785-1|AAH63785.1| 592|Homo sapiens piggyBac transposable
element derived 2 protein.
Length = 592
Score = 71.7 bits (168), Expect = 2e-12
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 59 HITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENV 118
HI +FD +T++ L+ L +G+ GTV+ R + C L + +E+ K + RG++ V
Sbjct: 347 HI-FFDKVFTSVKLMSILRKKGVKATGTVREYRTER-CPLKDPKELKK--MKRGSFDYKV 402
Query: 119 ASYEGQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHM 178
E +E+ W D+ V + S VG EP +R+ K QV P ++ Y +
Sbjct: 403 D--ESEEIIVCRWHDSSVVNICSNAVGIEPVRLTSRHSGAAKTRTQVHQPSLVKLYQEKV 460
Query: 179 GGVDLMDSFIGRCRIRI 195
GGV MD I + +++I
Sbjct: 461 GGVGRMDQNIAKYKVKI 477
>AL672183-3|CAI18712.1| 592|Homo sapiens piggyBac transposable
element derived 2 protein.
Length = 592
Score = 71.7 bits (168), Expect = 2e-12
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 59 HITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENV 118
HI +FD +T++ L+ L +G+ GTV+ R + C L + +E+ K + RG++ V
Sbjct: 347 HI-FFDKVFTSVKLMSILRKKGVKATGTVREYRTER-CPLKDPKELKK--MKRGSFDYKV 402
Query: 119 ASYEGQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHM 178
E +E+ W D+ V + S VG EP +R+ K QV P ++ Y +
Sbjct: 403 D--ESEEIIVCRWHDSSVVNICSNAVGIEPVRLTSRHSGAAKTRTQVHQPSLVKLYQEKV 460
Query: 179 GGVDLMDSFIGRCRIRI 195
GGV MD I + +++I
Sbjct: 461 GGVGRMDQNIAKYKVKI 477
>AL672183-2|CAI18711.1| 341|Homo sapiens piggyBac transposable
element derived 2 protein.
Length = 341
Score = 71.7 bits (168), Expect = 2e-12
Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 59 HITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENV 118
HI +FD +T++ L+ L +G+ GTV+ R + C L + +E+ K + RG++ V
Sbjct: 96 HI-FFDKVFTSVKLMSILRKKGVKATGTVREYRTER-CPLKDPKELKK--MKRGSFDYKV 151
Query: 119 ASYEGQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHM 178
E +E+ W D+ V + S VG EP +R+ K QV P ++ Y +
Sbjct: 152 D--ESEEIIVCRWHDSSVVNICSNAVGIEPVRLTSRHSGAAKTRTQVHQPSLVKLYQEKV 209
Query: 179 GGVDLMDSFIGRCRIRI 195
GGV MD I + +++I
Sbjct: 210 GGVGRMDQNIAKYKVKI 226
>D88259-1|BAB46919.1| 809|Homo sapiens cerebral protein-4 protein.
Length = 809
Score = 63.3 bits (147), Expect = 6e-10
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 37 PDLGAVLNTVTR---LLRPVPRHVNHITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLG 93
PDLG N V +L ++ H+ FD+F+T++ LL L +G+ GT++ NR
Sbjct: 598 PDLGLGGNLVMNFADVLLERGQYPYHLC-FDSFFTSVKLLSALKKKGVRATGTIRENRTE 656
Query: 94 KSCKLPEKREIMKSNVPRGTYHENVASYEGQELSATSWKDNKQVLLLSTYVGAEPADTIT 153
K C L + K + RG + + E E+ W + + L S VG EP + ++
Sbjct: 657 K-CPLMNVEHMKK--MKRGYFDFRIE--ENNEIILCRWYGDGIISLCSNAVGIEPVNEVS 711
Query: 154 RYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRCRIRI 195
+ + Q+S P ++ Y+ GV MD I + R+RI
Sbjct: 712 CCDADNEEIPQISQPSIVKVYDECKEGVAKMDQIISKYRVRI 753
>BC128585-1|AAI28586.1| 809|Homo sapiens piggyBac transposable
element derived 1 protein.
Length = 809
Score = 63.3 bits (147), Expect = 6e-10
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 37 PDLGAVLNTVTR---LLRPVPRHVNHITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLG 93
PDLG N V +L ++ H+ FD+F+T++ LL L +G+ GT++ NR
Sbjct: 598 PDLGLGGNLVMNFADVLLERGQYPYHLC-FDSFFTSVKLLSALKKKGVRATGTIRENRTE 656
Query: 94 KSCKLPEKREIMKSNVPRGTYHENVASYEGQELSATSWKDNKQVLLLSTYVGAEPADTIT 153
K C L + K + RG + + E E+ W + + L S VG EP + ++
Sbjct: 657 K-CPLMNVEHMKK--MKRGYFDFRIE--ENNEIILCRWYGDGIISLCSNAVGIEPVNEVS 711
Query: 154 RYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRCRIRI 195
+ + Q+S P ++ Y+ GV MD I + R+RI
Sbjct: 712 CCDADNEEIPQISQPSIVKVYDECKEGVAKMDQIISKYRVRI 753
>AL021997-3|CAD21704.2| 809|Homo sapiens piggyBac transposable
element derived 1 protein.
Length = 809
Score = 63.3 bits (147), Expect = 6e-10
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 37 PDLGAVLNTVTR---LLRPVPRHVNHITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLG 93
PDLG N V +L ++ H+ FD+F+T++ LL L +G+ GT++ NR
Sbjct: 598 PDLGLGGNLVMNFADVLLERGQYPYHLC-FDSFFTSVKLLSALKKKGVRATGTIRENRTE 656
Query: 94 KSCKLPEKREIMKSNVPRGTYHENVASYEGQELSATSWKDNKQVLLLSTYVGAEPADTIT 153
K C L + K + RG + + E E+ W + + L S VG EP + ++
Sbjct: 657 K-CPLMNVEHMKK--MKRGYFDFRIE--ENNEIILCRWYGDGIISLCSNAVGIEPVNEVS 711
Query: 154 RYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRCRIRI 195
+ + Q+S P ++ Y+ GV MD I + R+RI
Sbjct: 712 CCDADNEEIPQISQPSIVKVYDECKEGVAKMDQIISKYRVRI 753
>AK223446-1|BAD97166.1| 809|Homo sapiens piggyBac transposable
element derived 1 variant protein.
Length = 809
Score = 63.3 bits (147), Expect = 6e-10
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 37 PDLGAVLNTVTR---LLRPVPRHVNHITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLG 93
PDLG N V +L ++ H+ FD+F+T++ LL L +G+ GT++ NR
Sbjct: 598 PDLGLGGNLVMNFADVLLERGQYPYHLC-FDSFFTSVKLLSALKKKGVRATGTIRENRTE 656
Query: 94 KSCKLPEKREIMKSNVPRGTYHENVASYEGQELSATSWKDNKQVLLLSTYVGAEPADTIT 153
K C L + K + RG + + E E+ W + + L S VG EP + ++
Sbjct: 657 K-CPLMNVEHMKK--MKRGYFDFRIE--ENNEIILCRWYGDGIISLCSNAVGIEPVNEVS 711
Query: 154 RYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRCRIRI 195
+ + Q+S P ++ Y+ GV MD I + R+RI
Sbjct: 712 CCDADNEEIPQISQPSIVKVYDECKEGVAKMDQIISKYRVRI 753
>BC130441-1|AAI30442.1| 585|Homo sapiens piggyBac transposable
element derived 4 protein.
Length = 585
Score = 48.8 bits (111), Expect = 1e-05
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 59 HITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENV 118
+ + DNF + L L +GT + NR ++P +K + +GT V
Sbjct: 326 YCVFLDNFNISPMLFRELHQNRTDAVGTARLNRK----QIPND---LKKRIAKGT---TV 375
Query: 119 ASYEGQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHM 178
A + G EL A W D K+V +LST+ + R KK K PRVI +YN +M
Sbjct: 376 ARFCG-ELMALKWCDGKEVTMLSTFHNDTVIEVNNRNGKKTKR------PRVIVDYNENM 428
Query: 179 GGVDLMDSFI 188
G VD D +
Sbjct: 429 GAVDSADQML 438
>AK094816-1|BAC04428.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ37497 fis, clone BRAWH2015853. ).
Length = 332
Score = 48.8 bits (111), Expect = 1e-05
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 59 HITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENV 118
+ + DNF + L L +GT + NR ++P +K + +GT V
Sbjct: 73 YCVFLDNFNISPMLFRELHQNRTDAVGTARLNRK----QIPND---LKKRIAKGT---TV 122
Query: 119 ASYEGQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHM 178
A + G EL A W D K+V +LST+ + R KK K PRVI +YN +M
Sbjct: 123 ARFCG-ELMALKWCDGKEVTMLSTFHNDTVIEVNNRNGKKTKR------PRVIVDYNENM 175
Query: 179 GGVDLMDSFI 188
G VD D +
Sbjct: 176 GAVDSADQML 185
>AK057200-1|BAB71379.1| 581|Homo sapiens DR1) mRNA. protein.
Length = 581
Score = 48.8 bits (111), Expect = 1e-05
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 59 HITYFDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENV 118
+ + DNF + L L +GT + NR ++P +K + +GT V
Sbjct: 326 YCVFLDNFNISPMLFRELHQNRTDAVGTARLNRK----QIPND---LKKRIAKGT---TV 375
Query: 119 ASYEGQELSATSWKDNKQVLLLSTYVGAEPADTITRYEKKLKANVQVSCPRVINEYNVHM 178
A + G EL A W D K+V +LST+ + R KK K PRVI +YN +M
Sbjct: 376 ARFCG-ELMALKWCDGKEVTMLSTFHNDTVIEVNNRNGKKTKR------PRVIVDYNENM 428
Query: 179 GGVDLMDSFI 188
G VD D +
Sbjct: 429 GAVDSADQML 438
>AY971073-1|AAY18494.1| 158|Homo sapiens immunoglobulin alpha heavy
chain variable region protein.
Length = 158
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 148 PADTITRYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRCRIRISRESG 200
P D+ TRY + V +S + I+ +H + D+ + C R+S +SG
Sbjct: 53 PGDSDTRYSPSFQGQVTISADKSISTAYLHWNSLKASDTAMYYCARRMSSDSG 105
>AJ276986-1|CAC81830.1| 126|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 126
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 147 EPADTITRYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRCRIRISR 197
+P+D+ TRY + +V +S R IN + + D+ I C +SR
Sbjct: 33 DPSDSYTRYSPSFQGHVTISVDRSINTVYLQWSSLKASDTAIYYCARHVSR 83
>AY685326-1|AAT96477.1| 118|Homo sapiens immunoglobulin variable
region VH mu domain protein.
Length = 118
Score = 30.7 bits (66), Expect = 3.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 147 EPADTITRYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRC 191
+P+D+ T+Y K +V +S + IN +H + DS + C
Sbjct: 52 DPSDSFTQYSPSFKGHVVLSADKSINTATLHWNSLKASDSGLYFC 96
>BC031039-1|AAH31039.1| 749|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 749
Score = 30.3 bits (65), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF T I Y E L T RL KS +LP ++++S + R E Y+
Sbjct: 633 FENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYK 692
Query: 123 GQELSATSWKDN 134
SA +W+ N
Sbjct: 693 -SFFSALNWRKN 703
>AL359744-3|CAI40213.1| 777|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 777
Score = 30.3 bits (65), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF T I Y E L T RL KS +LP ++++S + R E Y+
Sbjct: 661 FENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYK 720
Query: 123 GQELSATSWKDN 134
SA +W+ N
Sbjct: 721 -SFFSALNWRKN 731
>AL359744-2|CAI40212.1| 729|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 729
Score = 30.3 bits (65), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF T I Y E L T RL KS +LP ++++S + R E Y+
Sbjct: 613 FENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYK 672
Query: 123 GQELSATSWKDN 134
SA +W+ N
Sbjct: 673 -SFFSALNWRKN 683
>AL359744-1|CAI40211.1| 162|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 162
Score = 30.3 bits (65), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF T I Y E L T RL KS +LP ++++S + R E Y+
Sbjct: 46 FENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYK 105
Query: 123 GQELSATSWKDN 134
SA +W+ N
Sbjct: 106 -SFFSALNWRKN 116
>AL133344-3|CAI42234.1| 777|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 777
Score = 30.3 bits (65), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF T I Y E L T RL KS +LP ++++S + R E Y+
Sbjct: 661 FENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYK 720
Query: 123 GQELSATSWKDN 134
SA +W+ N
Sbjct: 721 -SFFSALNWRKN 731
>AL133344-2|CAI42233.1| 729|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 729
Score = 30.3 bits (65), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF T I Y E L T RL KS +LP ++++S + R E Y+
Sbjct: 613 FENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYK 672
Query: 123 GQELSATSWKDN 134
SA +W+ N
Sbjct: 673 -SFFSALNWRKN 683
>AL133344-1|CAI42232.1| 162|Homo sapiens EF-hand domain
(C-terminal) containing 2 protein.
Length = 162
Score = 30.3 bits (65), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF T I Y E L T RL KS +LP ++++S + R E Y+
Sbjct: 46 FENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYK 105
Query: 123 GQELSATSWKDN 134
SA +W+ N
Sbjct: 106 -SFFSALNWRKN 116
>AK026254-1|BAB15413.1| 162|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22601 fis, clone HSI04471. ).
Length = 162
Score = 30.3 bits (65), Expect = 4.8
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 63 FDNFYTNIPLLHYLTNEGIYCLGTVQRNRLGKSCKLPEKREIMKSNVPRGTYHENVASYE 122
F+NF T I Y E L T RL KS +LP ++++S + R E Y+
Sbjct: 46 FENFDTFIYSCVYEDREKKNVLPTKDIKRLCKSSRLPLSDDLLESLLSRFEDSEKQIDYK 105
Query: 123 GQELSATSWKDN 134
SA +W+ N
Sbjct: 106 -SFFSALNWRKN 116
>DQ524158-1|ABI35670.1| 118|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 118
Score = 29.9 bits (64), Expect = 6.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 153 TRYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRC 191
T Y L++ V +S R N+Y++++G V D+ + C
Sbjct: 56 TNYNPSLQSRVTISIDRSNNQYSLNLGSVTAADTAVYYC 94
>AY607337-1|AAT01959.1| 113|Homo sapiens immunoglobulin heavy chain
CDR3 protein.
Length = 113
Score = 29.9 bits (64), Expect = 6.3
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 153 TRYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRCRIRISRESG 200
T Y LK+ V +S N++++ + V D+ + C IR+ +G
Sbjct: 51 TNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCAIRVMGATG 98
>S49816-1|AAB24246.1| 253|Homo sapiens thyrotropin receptor-I
protein.
Length = 253
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>S45272-1|AAB23390.2| 253|Homo sapiens thyrotropin receptor
protein.
Length = 253
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>M73747-1|AAA70232.1| 763|Homo sapiens thyroid stimulating hormone
receptor protein.
Length = 763
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>M32215-1|AAA61236.1| 764|Homo sapiens thyroid stimulatory hormone
receptor protein.
Length = 764
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>M31774-1|AAA36783.1| 764|Homo sapiens protein ( Human thyrotropin
receptor (TSH) mRNA, complete cds. ).
Length = 764
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>DQ523962-1|ABI35474.1| 115|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 115
Score = 29.5 bits (63), Expect = 8.4
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 153 TRYEKKLKANVQVSCPRVINEYNVHMGGVDLMDSFIGRCRIRISRES 199
T Y LK+ V +S + N++++ + V D+ + C R S S
Sbjct: 57 TNYNPSLKSRVTISVDKSNNQFSLRLSSVTAADTAVYYCATRTSSSS 103
>BC141970-1|AAI41971.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>BC127628-1|AAI27629.1| 274|Homo sapiens TSHR protein protein.
Length = 274
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>BC120973-1|AAI20974.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>BC120972-1|AAI20973.1| 231|Homo sapiens TSHR protein protein.
Length = 231
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>BC108653-1|AAI08654.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>BC063613-1|AAH63613.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>BC024205-1|AAH24205.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>BC009237-1|AAH09237.1| 253|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 253
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>AY429111-1|AAR07906.1| 764|Homo sapiens thyroid stimulating
hormone receptor protein.
Length = 764
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 42 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 101
Query: 86 TV 87
V
Sbjct: 102 KV 103
>AB209207-1|BAD92444.1| 770|Homo sapiens thyroid stimulating
hormone receptor variant protein.
Length = 770
Score = 29.5 bits (63), Expect = 8.4
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 28 KDIDRLPGKPDLGAVLNTVTRLLRPVPRHV-NHITYFDNFYTNIPL-LHYLTNEGIYCLG 85
KDI R+P P L + LR +P H +++ Y +I + L L + Y L
Sbjct: 48 KDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 107
Query: 86 TV 87
V
Sbjct: 108 KV 109
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.137 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,510,596
Number of Sequences: 224733
Number of extensions: 1293656
Number of successful extensions: 4985
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4952
Number of HSP's gapped (non-prelim): 44
length of query: 201
length of database: 73,234,838
effective HSP length: 86
effective length of query: 115
effective length of database: 53,907,800
effective search space: 6199397000
effective search space used: 6199397000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -