GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002515-TA|BGIBMGA002515-PA|undefined
         (70 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    19   3.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     19   5.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    19   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   6.6  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    18   8.7  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    18   8.7  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    18   8.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 19.4 bits (38), Expect = 3.8
 Identities = 8/38 (21%), Positives = 20/38 (52%)

Query: 15  NGEISEDNSTDNEDDIDYYSSQRDRLMELENEEDIGNF 52
           +GE+      D E+ ++ ++S + +    + +ED  +F
Sbjct: 861 DGEVVVKKEVDEEERLENHTSVKIKREAEDRDEDERSF 898


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 19.0 bits (37), Expect = 5.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 20  EDNSTDNEDDID 31
           +DN +D EDD D
Sbjct: 230 DDNISDPEDDDD 241


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
          homeodomain protein protein.
          Length = 232

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 8/24 (33%), Positives = 15/24 (62%), Gaps = 1/24 (4%)

Query: 6  IESISKRLENGEISEDNSTDNEDD 29
          +ES+  + E+ E+ E   +D +DD
Sbjct: 16 VESLLSKKEDEEV-EHRLSDRDDD 38


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
          variant 2 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 13 LENGEISEDNSTDNE 27
          L N   S+DN +D+E
Sbjct: 6  LRNDTYSDDNFSDDE 20


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
          variant 1 protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 13 LENGEISEDNSTDNE 27
          L N   S+DN +D+E
Sbjct: 6  LRNDTYSDDNFSDDE 20


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
          CHS1B protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 13 LENGEISEDNSTDNE 27
          L N   S+DN +D+E
Sbjct: 6  LRNDTYSDDNFSDDE 20


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
          CHS1A protein.
          Length = 1558

 Score = 18.6 bits (36), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 13 LENGEISEDNSTDNE 27
          L N   S+DN +D+E
Sbjct: 6  LRNDTYSDDNFSDDE 20


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 18.2 bits (35), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 38  DRLMELENEEDIGNF 52
           D++ E +NEE  G F
Sbjct: 141 DQVPECKNEEVAGGF 155


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 18.2 bits (35), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 38  DRLMELENEEDIGNF 52
           D++ E +NEE  G F
Sbjct: 141 DQVPECKNEEVAGGF 155


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 18.2 bits (35), Expect = 8.7
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 19  SEDNSTDNEDDIDYYSSQRDRLMELENEEDIGN 51
           SE N  D +DD      ++D L+       +GN
Sbjct: 189 SERNGKDLDDDDMNDDDRKDDLLGNNMHHILGN 221


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.302    0.128    0.332 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,151
Number of Sequences: 317
Number of extensions: 425
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 70
length of database: 114,650
effective HSP length: 44
effective length of query: 26
effective length of database: 100,702
effective search space:  2618252
effective search space used:  2618252
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.2 bits)
S2: 35 (18.2 bits)