BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002515-TA|BGIBMGA002515-PA|undefined
(70 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 0.26
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 0.46
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 23 0.81
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 0.81
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 22 2.5
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 21 3.3
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 21 5.7
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 20 7.5
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 20 9.9
AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled ... 20 9.9
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 20 9.9
AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase p... 20 9.9
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 25.0 bits (52), Expect = 0.26
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 20 EDNSTDNEDDIDYYSSQRD 38
+DN TDN D+ YYS R+
Sbjct: 414 KDNRTDNVIDVKYYSRCRN 432
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.2 bits (50), Expect = 0.46
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 18 ISEDNSTDNEDDIDYYSSQRDR 39
++ D+ DN+ +D Y+ ++DR
Sbjct: 565 LAPDHEGDNDSGVDEYTQEKDR 586
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 23.4 bits (48), Expect = 0.81
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 14 ENGEISEDNSTDNEDDIDYYSSQRDRLMELENEE 47
++ S +S+ D+ D+YSS L +EE
Sbjct: 458 DSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEE 491
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 23.4 bits (48), Expect = 0.81
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 14 ENGEISEDNSTDNEDDIDYYSSQRDRLMELENEE 47
++ S +S+ D+ D+YSS L +EE
Sbjct: 458 DSSSSSSSSSSSESDEHDFYSSSESDSDSLSSEE 491
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 21.8 bits (44), Expect = 2.5
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 21 DNSTDNEDDIDYYSSQRDRLMELENEE 47
D+ +D +DD D+ DRL E E E+
Sbjct: 99 DDDSDFDDDSDFDDDVGDRL-ESEEED 124
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 21.4 bits (43), Expect = 3.3
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 8 SISKRLENGEISEDNSTDNEDDIDYYSSQRDRLMELENEED 48
+ + + GE + D ED+ D Y + D E E +ED
Sbjct: 466 TFEEEIYKGEEDYEGEEDEEDEEDEY--EGDDTEEDEEDED 504
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/38 (18%), Positives = 19/38 (50%)
Query: 2 RPEEIESISKRLENGEISEDNSTDNEDDIDYYSSQRDR 39
R +E+ + + + E++ + NED++ + +R
Sbjct: 1329 REDEVAANVENAKENEVAANVENQNEDEVQPMEVEEER 1366
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 6 IESISKRLENGEISEDNSTDNEDDIDYYSSQRDRLME 42
+ +R NG + S + D +S++ L+E
Sbjct: 732 VRDTDRRCNNGSLRSVESAERAAKYDIFSNECSDLLE 768
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 13 LENGEISEDNSTDNEDDIDYY 33
LE+G + +++ E ID Y
Sbjct: 142 LEDGSVEGESNEQEEAQIDVY 162
>AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled
receptor 3 protein.
Length = 605
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 15 NGEISEDNSTDNEDDIDYY 33
NG ++DN T E+ +Y
Sbjct: 205 NGAAADDNGTRGEEINSFY 223
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 19.8 bits (39), Expect = 9.9
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 19 SEDNSTDNEDDID 31
+ED+ D+EDD D
Sbjct: 1824 NEDDDEDDEDDDD 1836
>AJ010194-1|CAA09033.1| 684|Anopheles gambiae prophenoloxidase
protein.
Length = 684
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 18 ISEDNSTDNEDDIDYYSSQRDR 39
+ E N DN +D + RDR
Sbjct: 613 VEEFNENDNCNDAHMFCGLRDR 634
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.302 0.128 0.332
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,930
Number of Sequences: 2123
Number of extensions: 1604
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 70
length of database: 516,269
effective HSP length: 48
effective length of query: 22
effective length of database: 414,365
effective search space: 9116030
effective search space used: 9116030
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.0 bits)
S2: 39 (19.8 bits)
- SilkBase 1999-2023 -