GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002515-TA|BGIBMGA002515-PA|undefined
         (70 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   0.27 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   0.62 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   0.62 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   3.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    20   3.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    19   4.4  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    19   5.8  

>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 23.4 bits (48), Expect = 0.27
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 16  GEISEDNSTDNEDDID 31
           GE+ ED+  D +DD D
Sbjct: 387 GEVDEDDDDDGDDDDD 402


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 0.62
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 3   PEEIESISKRLENGEISEDNSTDNEDD 29
           PE  ES   RL+N   + D+++   DD
Sbjct: 198 PELTESEQHRLQNRLYTNDSTSSKTDD 224


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 0.62
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 3   PEEIESISKRLENGEISEDNSTDNEDD 29
           PE  ES   RL+N   + D+++   DD
Sbjct: 236 PELTESEQHRLQNRLYTNDSTSSKTDD 262


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.8 bits (39), Expect = 3.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 20  EDNSTDNEDDIDYYSSQ 36
           E N+TD   DID   +Q
Sbjct: 564 EQNTTDQSMDIDVCDNQ 580


>AF388659-3|AAK71993.1|  548|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform C
          protein.
          Length = 548

 Score = 19.8 bits (39), Expect = 3.3
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 3  PEEIESISKRLENGEISEDNSTDNEDDIDYYSSQRDRLMELENEED 48
          P    S S  L   +  +D++ +   +  + +   ++L +LE E D
Sbjct: 38 PSSSRSPSPSLLTSQPHQDHNKEKSKNNHHCNQDTEKLNQLEIESD 83


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 4.4
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 20  EDNSTDNEDDIDYYSSQRDRLMELENE 46
           E+  T N  + DY  +Q   +   EN+
Sbjct: 164 EEEQTINRKNSDYLDNQEVSMENTENK 190


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization
          protein protein.
          Length = 250

 Score = 19.0 bits (37), Expect = 5.8
 Identities = 9/42 (21%), Positives = 24/42 (57%)

Query: 3  PEEIESISKRLENGEISEDNSTDNEDDIDYYSSQRDRLMELE 44
          P+++ +++KR +  +     +T NE + +  +  R+ L +L+
Sbjct: 31 PDDMRTVTKRPKTKKSQGSRTTHNELEKNRRAHLRNCLEKLK 72



 Score = 19.0 bits (37), Expect = 5.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 14  ENGEISEDNSTDNEDDIDYYSS 35
           E+ E+     T N+ D D +SS
Sbjct: 204 ESDEVDVIGYTSNQSDTDDHSS 225


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.302    0.128    0.332 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,845
Number of Sequences: 429
Number of extensions: 622
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 70
length of database: 140,377
effective HSP length: 45
effective length of query: 25
effective length of database: 121,072
effective search space:  3026800
effective search space used:  3026800
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (18.7 bits)
S2: 36 (18.6 bits)