Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002514-TA|BGIBMGA002514-PA|undefined
(626 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.27
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 30 1.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 1.5
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 1.9
SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr 2|||... 29 1.9
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 28 3.4
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 28 4.5
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 28 4.5
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 5.9
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 27 5.9
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 5.9
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 27 7.8
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 27 7.8
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 27 7.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.9 bits (69), Expect = 0.27
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 115 IYEVTEQYPEPEYHMAKIETPIGFSKTKTSSNAPELQTLIREAAAL 160
I + + + EYH +++E+ +G SK K +S ELQ E +L
Sbjct: 1575 ILQFNSRLADLEYHKSQVESELGRSKLKLASTTEELQLAENERLSL 1620
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 247 ANPQIEIKPQLILLENDEIKQEPSSFVPMYQKNLVQRDTQESSAVT 292
++ +I K L++ D +K EPS+FV +Y +++++ T S VT
Sbjct: 981 SHSRIGSKNNLLITILDLMKSEPSTFVSLYFNDILRKLTDLDSRVT 1026
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.5 bits (63), Expect = 1.5
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 241 SAELPPANPQIEIKPQLILLENDEIKQEPSSFVPMYQKNLVQRDTQESSAVTLIPQAIVV 300
SA P E L E + Q PSSF K+ + + + S+ L P +
Sbjct: 398 SAVQPTTQKTSEDSTDLHTNEIPNVAQPPSSFEKENNKDTSKLENPDISSSPLSPTEDLF 457
Query: 301 FNATDKSNLMSASNTTGDLIAEASQPITTTIKYIADPN 338
N ++ NL SA+ G SQP T K DP+
Sbjct: 458 PNDPEEENLFSAA--LGLNSNTGSQPSETQSKPSIDPS 493
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.1 bits (62), Expect = 1.9
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 556 TQKESITTKLQSLKHVKDAATRKEISENWKSPTLKSVDKTQGFEGNQVTEFGLK--LKAR 613
T+ ES+TT +SL D + + N + +L K + FEG + LK ++ R
Sbjct: 708 TEMESVTTSKESLA---DYLSNLKERHNDELDSLNK--KLREFEGILSSNSSLKSEIEER 762
Query: 614 NDQYIPLFEEYD 625
N+QY+ L E +D
Sbjct: 763 NNQYVTLRENFD 774
>SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 225
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 358 DVIAKGFYSAINDVRAAAALAQIEKLPESNRIADTAENITTTT 400
DV+ G Y I ++R AAL E+L + + DT +N TT
Sbjct: 140 DVMLDGVYDTIGNIRGQAALMG-EELGQQADLLDTLDNSIETT 181
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 3.4
Identities = 30/85 (35%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 130 AKIETPIGFSKTKTSSNAP--ELQTLIREAAALQVASQYGISPISAPQNGHVIHQHIPVQ 187
A +PIG S TSS AP + + QV S ISP P N H+I+ I
Sbjct: 421 AAFGSPIGSSTYPTSSPAPFWKYVAVPNPHDWPQVGSYDTISPYRNPVNSHLIYSQIQQS 480
Query: 188 PFNGIPTQ------QDLINSGAEGI 206
I Q DL+N G EGI
Sbjct: 481 SPKKIDEQLHDLQGVDLVN-GFEGI 504
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 233 PSVEFIPYSAELPPANPQIEIKPQLILLENDEIKQEPSSFVPMYQKNLVQRDTQESSAVT 292
PS+ PYS+ PP + KP + + + +P SF ++ RD+Q +S
Sbjct: 187 PSIHDAPYSSPFPPPRIVLGSKP----VSSSTLPSKPKSF-QVFSDASSSRDSQNASD-- 239
Query: 293 LIPQAIVVFNATDKSNL 309
+PQA + + + NL
Sbjct: 240 -LPQAKSLESEANTPNL 255
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/67 (20%), Positives = 31/67 (46%)
Query: 302 NATDKSNLMSASNTTGDLIAEASQPITTTIKYIADPNRDRLNTTPIFYAQIGQSIGDVIA 361
+A +SN ++ + ++S I + + +I+ PN +TP G+++
Sbjct: 47 SAIPQSNALNTTPNESTSQIDSSPKIPSAVPHISTPNPSSGASTPNIKRVSDFKFGEILG 106
Query: 362 KGFYSAI 368
+G YS +
Sbjct: 107 EGSYSTV 113
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 34 IAFRPGVNLQRYWNQQLVAPAASQRVPYV-VYRNSPHRAVSSTGAIHTIPAPNLSLSEK 91
I F+P V + + WN +++ + + H+ S HT+ APN S++
Sbjct: 626 IVFKPKVLISQVWNAIIISMYREHLISRTQIQELLYHQVPSEKAGYHTLRAPNFFYSQQ 684
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 27.5 bits (58), Expect = 5.9
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 11/111 (9%)
Query: 206 IVIPPNALYQPDPM-FLQKLQSQIIQSFPSV----EFIPYSAELPPANPQ--IEIKPQLI 258
I +P + + PD M F+ + ++I+ P + EF+ E N Q + + P L+
Sbjct: 79 IPLPVSLPWYPDGMAFMLDISKEVIRKSPHLKALQEFLVLETEAGDINRQESVSMVPPLL 138
Query: 259 LLENDEIKQEPSSFVPMYQK----NLVQRDTQESSAVTLIPQAIVVFNATD 305
L K P + + + T++ TL+P IV+ N +D
Sbjct: 139 LNVESHHKVLDMCAAPGSKTAQLLEALHKPTKKEDITTLLPSGIVIANDSD 189
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 241 SAELPPANPQIEIKPQLILLENDE---IKQEPSSFVPMYQ 277
+AEL P NP I+ + QL+ N+E I P S VP Q
Sbjct: 679 AAELDPTNPHIKARLQLLRGPNNEQHKIVNAPPSNVPNVQ 718
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 160 LQVASQYGISPISAPQNGHVIHQHIPVQPFNGIPTQQDLINSGAEGIVIPP 210
L+ Q G+SPI + IH+++ + F P+ D++++ E V P
Sbjct: 218 LRYCLQKGVSPIFKASSFVHIHENVKAEQFMLDPSDMDVMDTWDEEFVSKP 268
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 99 SETVSNGNTVSQPPKPIYEVTEQYPEPEYHMAKI 132
SET ++ +V+ PP I E T + P P + + ++
Sbjct: 190 SETSNSQQSVTLPPLDIVEKTLEAPSPNFRIKRV 223
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 391 DTAENITTTTVNPNLEPYFVKTKEEGK-DNKTVSELKSLLGMPFSKTSDS 439
DT + ++ N EP+ + T + GK +N VS ++L P++++ S
Sbjct: 50 DTTNVLVADDLDSNFEPFSI-TDDYGKYENTLVSHSSTILNEPYNESPSS 98
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.128 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,783,605
Number of Sequences: 5004
Number of extensions: 119762
Number of successful extensions: 327
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 316
Number of HSP's gapped (non-prelim): 20
length of query: 626
length of database: 2,362,478
effective HSP length: 77
effective length of query: 549
effective length of database: 1,977,170
effective search space: 1085466330
effective search space used: 1085466330
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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