Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002513-TA|BGIBMGA002513-PA|undefined
(231 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 36 0.007
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 33 0.035
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.33
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.3
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 27 3.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.1
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 3.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 4.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 4.0
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 26 4.0
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 4.0
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 26 4.0
SPCC4G3.15c |||CCR4-Not complex subunit Not2 |Schizosaccharomyce... 26 5.3
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.1
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 25 7.1
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 7.1
SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|ch... 25 7.1
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 7.1
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 35.5 bits (78), Expect = 0.007
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 116 QAVKAITGGVTILKGQLIKGGGALASTLGKVIAVKGDAVSNLGKKIVSSAALSEKKPVST 175
Q + G V + K Q +K L + + +IA D++S +G V+S A+ KP T
Sbjct: 675 QQLSTQIGSVGMGKKQAVKELRKLQAKIDSIIA---DSMSPMGTGAVNSPAI---KPQVT 728
Query: 176 PV-YGPPPTSHLEYGPPP----SAYGAPTAPAHYSHTAPALPTGYAA 217
P P PT +++ PPP S+ PA +H + P Y +
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTHANSSTPMNYVS 775
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 33.1 bits (72), Expect = 0.035
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Query: 81 SKTGGDHGGYSYEPPQQGEKYDF-LGLKKSILYTLFQAVKAITGGVTILKGQLIKGGGAL 139
SKTG + + P K + L + L+ + K + GGV G + G +
Sbjct: 1181 SKTGTINASLRFVPGWHRRKAVLDVTLADNFLHAANKGAKLVVGGVGAAGGLALAGVTTI 1240
Query: 140 ASTLGKVIAVKGDAVSNLGKKIVSSA 165
S K + D V+ GK I+S A
Sbjct: 1241 GSVGSKAVTGVADGVTGTGKHIISGA 1266
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.33
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 143 LGKVIAVKGDAVSNLGKKIVSSAALSEKKPVSTPVYGPPPTSHLEYGPPPSAYGAPTAPA 202
LG + A + ++GK S+A P S P PPT E PP SA P+ P
Sbjct: 101 LGGLFAGGMPKLRHIGKSSASAA------PPSAPA---PPTPQSELRPPTSAPPRPSIPP 151
Query: 203 HYSHTAPALPT 213
+AP +P+
Sbjct: 152 PSPASAPPIPS 162
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 2.3
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 162 VSSAALSEKKPVSTPVYGPPPTSHLEYGPPPSAYGA------PTAPAHYSHTAPALP 212
VS+AAL+ K P PPP S G PP G+ P P S+ A ++P
Sbjct: 299 VSAAALAANKKRPPP---PPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.1 bits (57), Expect = 2.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 154 VSNLGKKIVSSAALSEKKPVSTPVYGPP---PTSHLEYGPPPSAYGAPTAPAHYSHTAPA 210
V++ G + + AA P++ P GPP PTS L PP+ GA + AP
Sbjct: 1869 VNDDGSDLSNQAAPPPPPPMALPKAGPPSAAPTSALPPAGPPA--GATAISGNPGMPAPV 1926
Query: 211 LPTG 214
TG
Sbjct: 1927 PLTG 1930
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.6 bits (56), Expect = 3.1
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 155 SNLGKKIVSSAALSEKKPVSTPVYGPPPTSHLEYGPPPS-AYGAPTAPAHYSHTAPALPT 213
SN+G +SS S K S+ V S+L G PPS + +A + YS T PA
Sbjct: 501 SNVGPVRISSNRRSRKFSSSSRV----SVSNLLAGSPPSPSSSTKSASSSYSTTTPAFSI 556
Query: 214 G 214
G
Sbjct: 557 G 557
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 3.1
Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Query: 158 GKKIVSSAALSEKKPVSTPVYGPPPTSHLEYGPPPSAYGAPTAPAHYSHTAPALPTGYAA 217
G AA+S VST + PPPT+ + P A P H A T
Sbjct: 889 GASSAQPAAMSRTSSVST-LPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPP 947
Query: 218 HKYPAH 223
+ P+H
Sbjct: 948 VQQPSH 953
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 169 EKKPVSTPVYGPPPTSHLEYGPPPSAYGAPTAP 201
++ S PV PP S L++ P PS AP+ P
Sbjct: 306 KQSSASHPVLQPPAPSTLQFNPSPSP-AAPSYP 337
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/42 (33%), Positives = 15/42 (35%)
Query: 172 PVSTPVYGPPPTSHLEYGPPPSAYGAPTAPAHYSHTAPALPT 213
PV P G PP PP P TAP +PT
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Score = 25.8 bits (54), Expect = 5.3
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 168 SEKKPVSTPVYGPPPTSHLEYGPP---PSAYGAPTAPAHYSHTAPALP 212
SE PV P G PP PP PSA G P P + AP +P
Sbjct: 1195 SEAPPVPKPSVGVPPVPPPSTAPPVPTPSA-GLPPVPVP-TAKAPPVP 1240
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 4.0
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 173 VSTPVYGPPPTSHLEYGPPPSAYGAPTAPAHYSHTAPALPTGYA 216
+S P PPP S PPPSA P P S P LP A
Sbjct: 1702 MSAPTPPPPPMS---VPPPPSAPPMPAGPP--SAPPPPLPASSA 1740
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 4.0
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 93 EPPQQGEKYDFLGLKKSILYTLFQAVKAITGGVTILKGQLIKGGGALASTLGKVIAVKG- 151
EP E+ FL L+ + ++L+ + + V L+ QL+ G LA K I VK
Sbjct: 3039 EPEVVIERKRFLQLQFAF-WSLYNEIYSEKMNVIPLE-QLMNTGSYLA----KKIKVKNP 3092
Query: 152 DAVSNLGKKIVSSAALSEKKPVSTPVYGPPPTSHLEYGPPPS 193
D +++ G IVS + K + Y PP + P PS
Sbjct: 3093 DMIASSGFDIVSVVLMMGVKSTNERQYWTPPVYNFYSDPNPS 3134
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 26.2 bits (55), Expect = 4.0
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 172 PVSTPVYGPP-PTSHLEYGPPPSAYGAPTAP---AHYSHTAP-ALPTGYAAHKYPAH 223
P + P + PP P H PPP + +P +P H +P G+ H+ H
Sbjct: 171 PHTRPPHHPPHPHFHNNNYPPPYCFQSPVSPGATVPLQHHSPYPSDNGFPGHRRQTH 227
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 26.2 bits (55), Expect = 4.0
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 40 IMRTKRSSAQALTSVVSKASSGLQSKVGLLGQASAFISSASSKTGGDHGGYSYEPPQQGE 99
I T RS + L + ++ S L+++ LG + +S + + + G H Y+ PQ+G
Sbjct: 406 IKETDRSGNKRLMLLETQHSL-LKAEADCLGLPVSNVSESPAASNGSHHPYASGLPQRGT 464
Query: 100 KYDFLG 105
F G
Sbjct: 465 NTFFRG 470
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 46 SSAQALTSVVSKASSGLQSKVGLLGQASAFISSASSKTGGDHGGY 90
+SA A +SV+ +SS + S + ++ +++++ TG GG+
Sbjct: 118 TSAAASSSVIPTSSSVVASSSEVASSTTSSAAASATSTGSSSGGF 162
>SPCC4G3.15c |||CCR4-Not complex subunit Not2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 176
Score = 25.8 bits (54), Expect = 5.3
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 165 AALSEKKPVSTPVYGPPPTSHLEYGPPPS 193
A L+ KKPVS P++ P + PPP+
Sbjct: 50 AELNTKKPVSQPMF-KLPACYKNVNPPPA 77
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 181 PPTSHLEYGPPPSAYGAPTAPAHYSHTAPALPTGYA 216
PP +L+ PPP A TA + ++ A T A
Sbjct: 41 PPVENLKLAPPPGATSVNTAVYNNNNNTSAANTNAA 76
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 172 PVSTPVYGPPPTSHLEYGPPPSAYGAPTAP 201
P P+ PPP + P P+A P AP
Sbjct: 283 PGGAPLVPPPPPGMVMASPSPAAATIPGAP 312
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 7.1
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 148 AVKGDAVSNLGKKIVSSAALSEKKPVSTPVYGPPPTSHLEYGPPPSAYGA-PTAPAHYSH 206
A DA + + S +PV P Y P P+ + P A P P+ Y
Sbjct: 94 AYSRDAPAAINNNFGYSYVGQSSQPV--PSYNPLPSYNTASLPNAGIPAAMPGMPSGYPG 151
Query: 207 TAPALPTGYAAHKYPAHLDGKEI 229
T P GY AH + +G I
Sbjct: 152 TVPIPQGGYNAHYSSPYNNGYPI 174
>SPCC757.13 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 110 ILYTLFQAVKAITGGVTILKGQLIKGGG 137
I+ TLF V IT G+ + +IKG G
Sbjct: 304 IMITLFTGVCMITNGIGVFSTLIIKGLG 331
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 46 SSAQALTSVVSKASSGLQSKVGLLGQASAFISSASS 81
S+ +++SVVS ASS L + ASA +SS++S
Sbjct: 258 SATSSVSSVVSSASSALSASAS---SASASVSSSAS 290
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.129 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 993,157
Number of Sequences: 5004
Number of extensions: 39668
Number of successful extensions: 116
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 99
Number of HSP's gapped (non-prelim): 29
length of query: 231
length of database: 2,362,478
effective HSP length: 71
effective length of query: 160
effective length of database: 2,007,194
effective search space: 321151040
effective search space used: 321151040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 52 (25.0 bits)
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