GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002511-TA|BGIBMGA002511-PA|undefined
         (80 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   0.92 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   1.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   2.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   3.7  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    20   3.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   3.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   3.7  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    19   4.9  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    19   4.9  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    19   6.5  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    19   8.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    19   8.6  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 0.92
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 22  VWKRLEEKYAKCC 34
           +WK+L E Y + C
Sbjct: 263 IWKKLREDYTRQC 275


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 1.2
 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 6   TLFTDKSR--FCLKLDYRVWKRLEEKY 30
           ++F D +R  F   L  +++K LEEKY
Sbjct: 198 SIFPDSARKPFFKLLTSKIYKVLEEKY 224


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 2.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)

Query: 23  WKRLEEKYAK 32
           W  LEEKY K
Sbjct: 101 WNELEEKYDK 110


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 9/36 (25%), Positives = 18/36 (50%)

Query: 35   IIREEIYYGVESFMVWVGASVCMARRSLCVIENGSL 70
            I+   + YG+++  V       +  ++L V E+G L
Sbjct: 1361 IVMSSVTYGIDTVAVCDACYSTIEEKNLQVNESGKL 1396


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)

Query: 23  WKRLEEKYAKCC 34
           WK L E Y + C
Sbjct: 266 WKNLREDYNRLC 277


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)

Query: 23  WKRLEEKYAKCC 34
           WK L E Y + C
Sbjct: 266 WKNLREDYNRLC 277


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 6/12 (50%), Positives = 7/12 (58%)

Query: 23  WKRLEEKYAKCC 34
           WK L E Y + C
Sbjct: 266 WKNLREDYNRLC 277


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 22  VWKRLEEKY 30
           +WK+LE KY
Sbjct: 95  MWKQLEAKY 103


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 23  WKRLEEKYAKCCIIREE 39
           W  LE KY K  + R++
Sbjct: 101 WNELEAKYDKDGVYRQK 117


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 19.0 bits (37), Expect = 6.5
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 23  WKRLEEKY 30
           WK+LE KY
Sbjct: 100 WKQLEAKY 107


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 18.6 bits (36), Expect = 8.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query: 21  RVWKRLEEKY 30
           R W+RL +KY
Sbjct: 98  RDWERLSKKY 107


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 18.6 bits (36), Expect = 8.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)

Query: 22  VWKRLEEKYAK 32
           VWKR+   Y K
Sbjct: 231 VWKRIPHDYRK 241


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.138    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,449
Number of Sequences: 317
Number of extensions: 673
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 80
length of database: 114,650
effective HSP length: 46
effective length of query: 34
effective length of database: 100,068
effective search space:  3402312
effective search space used:  3402312
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.9 bits)
S2: 36 (18.6 bits)