GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002511-TA|BGIBMGA002511-PA|undefined
         (80 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071062-1|AAL48684.1|  704|Drosophila melanogaster RE14195p pro...    28   1.3  
AE014297-1564|AAF54846.1|  704|Drosophila melanogaster CG6225-PA...    28   1.3  
BT023292-1|AAY55708.1|  361|Drosophila melanogaster IP02440p pro...    26   7.2  
AE014296-2309|AAN11812.1|  354|Drosophila melanogaster CG32136-P...    26   7.2  
AE014296-2308|AAN11811.1|  362|Drosophila melanogaster CG32136-P...    26   7.2  

>AY071062-1|AAL48684.1|  704|Drosophila melanogaster RE14195p
           protein.
          Length = 704

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 5/57 (8%)

Query: 16  LKLDYRVWKRLEEKYAKCCIIREEIYYGVESFM-VWVGASVC---MARRSLCVIENG 68
           +K +  +W RL +K+AK   +R  + YG  S +  ++ ++V    ++ +SL VIE+G
Sbjct: 404 IKYEVELW-RLSQKHAKGLSLRTVVAYGEHSALPYYISSNVTNIEVSDQSLLVIESG 459


>AE014297-1564|AAF54846.1|  704|Drosophila melanogaster CG6225-PA
           protein.
          Length = 704

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 5/57 (8%)

Query: 16  LKLDYRVWKRLEEKYAKCCIIREEIYYGVESFM-VWVGASVC---MARRSLCVIENG 68
           +K +  +W RL +K+AK   +R  + YG  S +  ++ ++V    ++ +SL VIE+G
Sbjct: 404 IKYEVELW-RLSQKHAKGLSLRTVVAYGEHSALPYYISSNVTNIEVSDQSLLVIESG 459


>BT023292-1|AAY55708.1|  361|Drosophila melanogaster IP02440p
           protein.
          Length = 361

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 15  CLKLDYRVWKRLEEKYAKCCIIREEIYYGVESFMVWVGASVCMARRSLCVI 65
           C  L+   ++R  E++ + C+   + +Y  E + +++GAS+ +A    CV+
Sbjct: 211 CQSLERLSYER--ERHTESCLPHLDNWYR-EQYSIFLGASLILAMIEFCVL 258


>AE014296-2309|AAN11812.1|  354|Drosophila melanogaster CG32136-PB,
           isoform B protein.
          Length = 354

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 15  CLKLDYRVWKRLEEKYAKCCIIREEIYYGVESFMVWVGASVCMARRSLCVI 65
           C  L+   ++R  E++ + C+   + +Y  E + +++GAS+ +A    CV+
Sbjct: 204 CQSLERLSYER--ERHTESCLPHLDNWYR-EQYSIFLGASLILAMIEFCVL 251


>AE014296-2308|AAN11811.1|  362|Drosophila melanogaster CG32136-PA,
           isoform A protein.
          Length = 362

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 15  CLKLDYRVWKRLEEKYAKCCIIREEIYYGVESFMVWVGASVCMARRSLCVI 65
           C  L+   ++R  E++ + C+   + +Y  E + +++GAS+ +A    CV+
Sbjct: 212 CQSLERLSYER--ERHTESCLPHLDNWYR-EQYSIFLGASLILAMIEFCVL 259


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.328    0.138    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,877,110
Number of Sequences: 52641
Number of extensions: 133460
Number of successful extensions: 216
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 216
Number of HSP's gapped (non-prelim): 5
length of query: 80
length of database: 24,830,863
effective HSP length: 60
effective length of query: 20
effective length of database: 21,672,403
effective search space: 433448060
effective search space used: 433448060
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 53 (25.4 bits)