GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002511-TA|BGIBMGA002511-PA|undefined
         (80 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   1.4  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   3.3  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   3.3  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   3.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   5.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            19   5.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   10.0 

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 1.4
 Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 5   ETLFTDKSRFCLKLDYRVWKRLEEKYAKCCIIREEIYYGVESFMVWVGASVCMA 58
           + L+     FC +LD    + + + Y   C +  + Y   +  + W+   +  A
Sbjct: 517 QNLYEQFDSFCGQLDVYKVETIGDAYCVACGLHRDTYIHAQQ-IAWMALKMIQA 569


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 19  DYRVWKRLEEKYAKCCIIRE--EIYYGVESFMVWVGASVCMA 58
           D  + +RL+E Y+  C + E  E+    + +  + GA  C+A
Sbjct: 204 DPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLA 245


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 19  DYRVWKRLEEKYAKCCIIRE--EIYYGVESFMVWVGASVCMA 58
           D  + +RL+E Y+  C + E  E+    + +  + GA  C+A
Sbjct: 204 DPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLA 245


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 19  DYRVWKRLEEKYAKCCIIRE--EIYYGVESFMVWVGASVCMA 58
           D  + +RL+E Y+  C + E  E+    + +  + GA  C+A
Sbjct: 204 DPAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLA 245


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 8/15 (53%), Positives = 8/15 (53%)

Query: 17  KLDYRVWKRLEEKYA 31
           K DYRVW      YA
Sbjct: 180 KHDYRVWNHQLISYA 194


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query: 55  VCMARRSLCVIENGSLAVARC 75
           VC+     C + +G+L   RC
Sbjct: 438 VCLPPGQYCDVISGNLEKGRC 458


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 18.6 bits (36), Expect = 10.0
 Identities = 7/30 (23%), Positives = 13/30 (43%)

Query: 51  VGASVCMARRSLCVIENGSLAVARCGTEML 80
           +GASV       C++    + V   G  ++
Sbjct: 203 IGASVLFEIFPFCIVFGSDMIVRSIGNSLM 232


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.328    0.138    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,438
Number of Sequences: 429
Number of extensions: 867
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 80
length of database: 140,377
effective HSP length: 47
effective length of query: 33
effective length of database: 120,214
effective search space:  3967062
effective search space used:  3967062
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.9 bits)
S2: 36 (18.6 bits)