Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002510-TA|BGIBMGA002510-PA|undefined
(320 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 31 0.16
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 31 0.22
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 31 0.29
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 30 0.50
SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyce... 30 0.50
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 27 2.7
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 27 2.7
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 27 3.5
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 4.7
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|... 27 4.7
SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor ... 27 4.7
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 27 4.7
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 4.7
SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces ... 26 6.2
SPAC2G11.15c |tgs1|SPAC521.01c|RNA methyltransferase Tgs1 |Schiz... 26 6.2
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 26 8.2
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.2
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 26 8.2
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 8.2
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 26 8.2
SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|c... 26 8.2
>SPBC1289.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 481
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 197 RPDSSTNAGRSSAKSFASLDTRNMGNSVLSASDRSKLLNGR 237
R + T A SS K F LD++ + +L DR K+LNGR
Sbjct: 71 RKYTETVATFSSLKPFGILDSQTINRYILFLVDRIKMLNGR 111
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 31.1 bits (67), Expect = 0.22
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 8/110 (7%)
Query: 133 NEPRLTREKLSYNQSNNDDNDMPDAFSSLLQITPIHIKSPIHKKRTNVSILRSDAASSKW 192
N P + S + +N D+ S+ L + +KSP + RS KW
Sbjct: 105 NSPVASYSSQSVSNDSNFPKDVTSPISTDLSGSNPSLKSPSSINSAKLRASRSFFRFPKW 164
Query: 193 MRNT-RPDSSTNAGRSSAKSFASLDTR----NMGNSVLSA-SDRSKLLNG 236
R + PD N+ SS SLD N N LSA SD + L NG
Sbjct: 165 SRKSWNPD--VNSTTSSPSEVGSLDKAGGPLNQQNENLSAESDNTILQNG 212
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 30.7 bits (66), Expect = 0.29
Identities = 23/98 (23%), Positives = 43/98 (43%)
Query: 113 SQSSTDVTPQNSPRVSVVDINEPRLTREKLSYNQSNNDDNDMPDAFSSLLQITPIHIKSP 172
+QS++ + N P VSV N L R + N S +++ D SSLL + + + P
Sbjct: 522 NQSTSSFSRYNQPTVSVDLRNSSILRRAQEPVNGSTGENHIGDDYISSLLDSSNSNSQRP 581
Query: 173 IHKKRTNVSILRSDAASSKWMRNTRPDSSTNAGRSSAK 210
+ ++ +A+ + M T ++ N S +
Sbjct: 582 FSTVPSESNVFSRNASGNFSMSQTHQPTTDNTSSFSTQ 619
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 29.9 bits (64), Expect = 0.50
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 81 EKRLSYRQIEHEEVIAIHYNDYEQFSEREERLSQSSTDVTPQNSPRVSVVDINEPRLTRE 140
E+++ Y + E+EEV+ + N E+ S + L+++ V Q S + NEP +
Sbjct: 586 EEKIQYLETENEEVLQKYENLQEELSSTRKLLTKNEAAVAEQQSN--EEMHSNEPNILNL 643
Query: 141 KLSYNQSNNDDNDMPDAFSSLLQITPIHIK 170
+ + ++ +AF LQ+T + K
Sbjct: 644 YSVFEGKVDSLQELYNAFK--LQLTSLKQK 671
>SPAC1B3.16c |vht1||vitamin H transporter Vth1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 568
Score = 29.9 bits (64), Expect = 0.50
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 32 LAEEWERIERTLYDEEGPKSNRPEVIE 58
+A EW R EE PK N PE++E
Sbjct: 1 MASEWPETSRASSVEENPKLNIPEIVE 27
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 30 KTLAEEWERIERTLYDEEGPKSNRPEVIEECKQWRQLHPHFRVIGRAIT-LPEKRLSYRQ 88
K L EE E +E+ L DEE K + + R L P R A + +P+K+ Y++
Sbjct: 72 KKLEEEGEEVEKILRDEERIKKRKIQKNRAANLQRTLQPPKRPTPSAASEVPKKK--YKK 129
Query: 89 IE 90
I+
Sbjct: 130 IK 131
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 27.5 bits (58), Expect = 2.7
Identities = 21/83 (25%), Positives = 33/83 (39%)
Query: 56 VIEECKQWRQLHPHFRVIGRAITLPEKRLSYRQIEHEEVIAIHYNDYEQFSEREERLSQS 115
V+E+ + H + + E+RLS R+ E E VIA E+ RE
Sbjct: 294 VLEQSDLLHKKHQMLIQLENDLQFREQRLSARESELENVIASRLAQREEILRRELEKQLR 353
Query: 116 STDVTPQNSPRVSVVDINEPRLT 138
D Q + V + + R+T
Sbjct: 354 DMDARYQRHMQTVVNSMQKMRVT 376
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 27.1 bits (57), Expect = 3.5
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 105 FSEREERLSQSSTDVTPQNSPRVSVVDINEPRLTREKLSYNQSNNDDNDMPDAFSSLLQI 164
FSER+ + S D TP P V+ +++PR R + SN D M + S+ L +
Sbjct: 363 FSERKAYAADDSIDNTPSKVPIVN--SLSDPRTNR---PFFYSNPD--SMYRSISNPLHL 415
Query: 165 TPIHIKSPIHKK 176
SP+++K
Sbjct: 416 VDSQHLSPLNRK 427
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/72 (22%), Positives = 30/72 (41%)
Query: 92 EEVIAIHYNDYEQFSEREERLSQSSTDVTPQNSPRVSVVDINEPRLTREKLSYNQSNNDD 151
E V + D++ + L +ST +S R+SV+ N + +S + NN+
Sbjct: 302 ESVYEDVFEDFDPSGSNQASLRSTSTIHYTPSSKRISVIPPNTSNIGSRVVSRSGQNNNQ 361
Query: 152 NDMPDAFSSLLQ 163
P ++ Q
Sbjct: 362 PAQPGQYNQQSQ 373
>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 278
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 66 LHPHFRVIGRAITLPEKRLSYRQIEHEEVIAIHYNDYEQFSEREERL 112
LHP FR GR + L + +H E + IH++ QF+ ++L
Sbjct: 94 LHP-FRTDGRHYRDSKHNLDIQVFDHIEYVHIHWDHDTQFALELDKL 139
>SPCC1442.01 |ste6|SPCC1450.17|guanyl-nucleotide exchange factor
Ste6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 26.6 bits (56), Expect = 4.7
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 1/119 (0%)
Query: 85 SYRQIEHEEVIAIHYNDYEQFSEREERLSQSSTDVTPQNSPRVSVVDINEPRLTREKLSY 144
S+ I + + +++ +FS +E + S N ++V EPR L+Y
Sbjct: 678 SFSHISRIQFLTKIWDNLNRFSPKE-KTSTFYLSNHLVNFVTETIVQEEEPRRRTNVLAY 736
Query: 145 NQSNNDDNDMPDAFSSLLQITPIHIKSPIHKKRTNVSILRSDAASSKWMRNTRPDSSTN 203
D + F+SL I SPIH+ R + L S +S + N ++ N
Sbjct: 737 FIQVCDYLRELNNFASLFSIISALNSSPIHRLRKTWANLNSKTLASFELLNNLTEARKN 795
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 170 KSPIHKKRTNVSILRSDAASSKWMRNTRPDSSTNAGRSSAKSF--ASLDTRNMGNSVLSA 227
++PI KR ++S ++ A S+ N PDS+ A + F A+ + + +SVL+
Sbjct: 317 ENPIWSKRFSISSIKYSAPSTSNASNIAPDSAPPASSQFSVPFNAAAENINDTPDSVLAN 376
Query: 228 S 228
S
Sbjct: 377 S 377
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 4.7
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 100 NDYEQFSEREERLSQSSTDVTPQNSPRVSVVDINEPRLTREKLSYNQS 147
N + S+ + L QS+ D+T +SP + PR T+ KLS QS
Sbjct: 314 NYNKDVSDAQNSLGQSAVDLTTPSSPPI-------PRHTKPKLSTTQS 354
>SPCC74.06 |mak3|phk2|histidine kinase Mak3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2344
Score = 26.2 bits (55), Expect = 6.2
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 9/99 (9%)
Query: 115 SSTDVTPQNSPRVSVVDINEPRLTREKLSYN----QSNNDDNDMPDAFSS-----LLQIT 165
+ TD SP S +DIN + EK S+ + DD+ P A S L+ +
Sbjct: 1403 TQTDFPLVFSPERSSIDINASSMRSEKASFEIPFPEEQIDDDVSPVAQDSSLEELLISLD 1462
Query: 166 PIHIKSPIHKKRTNVSILRSDAASSKWMRNTRPDSSTNA 204
I + S + +T S + S + DSS NA
Sbjct: 1463 IIDLTSVMRSCQTIASEIELTGLLSTMTQRMLEDSSANA 1501
>SPAC2G11.15c |tgs1|SPAC521.01c|RNA methyltransferase Tgs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 221 GNSVLSASDRSKLLNGRIVTGRYRDSTKLEPLCSPYLPQNDVIKHQNAY 269
G +V S +D LN ++++T++ P + +LP+N +K AY
Sbjct: 160 GKTVYSLND----LNPYAFDVLFKEATRISPYVAAFLPRNTDVKELAAY 204
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 123 NSPRVSVVDINEPRLTREKLS-YNQSNNDDNDMPDAFSS 160
N +V VV P L E+ Y N +ND PD++SS
Sbjct: 216 NLHQVVVVKGTYPSLLLEEWDRYLMQNGSENDRPDSYSS 254
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 8.2
Identities = 28/130 (21%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 113 SQSSTDVTPQNSPRVSVVDINEPRLTREKLSYNQSNNDDNDMPDAFSSLLQITPIHIKSP 172
S + ++ +SP S D +L ++ ++++ SSLL P + S
Sbjct: 90 SATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSEYTPSSTESSSLLD--PSSVSSA 147
Query: 173 IHKKRTNV--SILRSDAASSKWMRNTRPDSSTNAGRSSAKSFASLDTRNMGNSVLSASDR 230
I T+V SI S +SS + ++ S +++ SS S +S + ++ +++
Sbjct: 148 ILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSS 207
Query: 231 SKLLNGRIVT 240
S L + +V+
Sbjct: 208 SYLSSSSVVS 217
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 149 NDDNDMPDAFSSLLQITPIHIKSPIHK 175
N D+D+ + + SL +I H K P HK
Sbjct: 77 NADDDLTEFYKSLGEIQEFHKKYPDHK 103
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 8.2
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 181 SILRSDAASSKWMRNTRPDSSTNAGRS----SAKSFASLDTRNMGNSVLSASDRSKLLN 235
SI S ASS ++ SSTN+ S S+ + +SL + NS S+S S LN
Sbjct: 143 SITSSSLASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLN 201
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 25.8 bits (54), Expect = 8.2
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 156 DAFSSLLQITPIHIKSPIHKKRTNVSILRSDAASSKWMRNTRPDSSTNAGRSSAKSFASL 215
+ F S L I+ +HI S ++R + L +S PD +T + K FA
Sbjct: 380 ELFISYL-ISCLHIPSTTPRERNVETSLHKVVSSLDLSEEISPDRATPTSFTERKRFA-F 437
Query: 216 DTRN 219
DTRN
Sbjct: 438 DTRN 441
>SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 83 RLSYRQIEHEEVIAIHYNDYEQFSEREERLSQSSTDVTPQNSPRVSVVDINEPRL 137
R + IE +E++A+H + EQ ERL S D NS + + +N RL
Sbjct: 103 RSELQSIERQEMVALH-SQVEQLFSDVERLKTSFRDQL-NNSTSEARLQLNIDRL 155
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.127 0.362
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,359,497
Number of Sequences: 5004
Number of extensions: 55256
Number of successful extensions: 176
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 166
Number of HSP's gapped (non-prelim): 23
length of query: 320
length of database: 2,362,478
effective HSP length: 73
effective length of query: 247
effective length of database: 1,997,186
effective search space: 493304942
effective search space used: 493304942
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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