Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002509-TA|BGIBMGA002509-PA|IPR004934|Tropomodulin,
IPR003590|Leucine-rich repeat, ribonuclease inhibitor subtype
(405 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 27 0.92
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 27 0.92
AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 27 1.2
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 27 1.2
AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein. 25 3.7
AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein. 25 3.7
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 25 3.7
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 3.7
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 25 4.9
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 24 6.5
AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein. 24 8.5
AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein. 24 8.5
AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein. 24 8.5
AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein. 24 8.5
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 27.1 bits (57), Expect = 0.92
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 21/93 (22%)
Query: 250 AQPPDINPNPH--SLSRASHNSVHPQPQLRRGLDP-----------VSER----PSRKQA 292
AQPP + +PH L H+ HPQ Q P +S+R + +Q
Sbjct: 89 AQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQ 148
Query: 293 RTEPRT--VTNPISPRDAMPSVV--YSRESLHP 321
+ P++ + PISP P+V+ Y + LHP
Sbjct: 149 QPHPQSPAIREPISPGPIHPAVLLPYPQHVLHP 181
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 27.1 bits (57), Expect = 0.92
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 21/93 (22%)
Query: 250 AQPPDINPNPH--SLSRASHNSVHPQPQLRRGLDP-----------VSER----PSRKQA 292
AQPP + +PH L H+ HPQ Q P +S+R + +Q
Sbjct: 89 AQPPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQ 148
Query: 293 RTEPRT--VTNPISPRDAMPSVV--YSRESLHP 321
+ P++ + PISP P+V+ Y + LHP
Sbjct: 149 QPHPQSPAIREPISPGPIHPAVLLPYPQHVLHP 181
>AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein.
Length = 506
Score = 26.6 bits (56), Expect = 1.2
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 233 NRHVEIRTGDQVDRFVRAQPPDINPNPHSLSRASHNSVHPQPQLRRGLDPVSERPSRKQA 292
N H E++ D + + ++ NP+ +R +S H Q Q P ++ S Q
Sbjct: 98 NSHTELKPLDVCEYAYHLKKDEVCINPYHYARNESHSQHSQQQ----QSPQQQQSS--QQ 151
Query: 293 RTEPRTVTNP--ISPRDAMPSVVYSRESLHPNSSSPVRSKRSDAN 335
+P T+ P +S SV Y+ + L +++ PV ++ + N
Sbjct: 152 LQQPLTILVPKNLSNSQGENSVTYTLDDL--SNTVPVNTQYNALN 194
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 26.6 bits (56), Expect = 1.2
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 18/120 (15%)
Query: 252 PPDINPNPHSLSRASHNSVHPQP------------QLRRGLDPVSERPSRKQARTEPRTV 299
P P+PHSL A N V P P LR L SE K +T P
Sbjct: 1268 PDTAVPDPHSLY-AIPNKVKPSPLAGAAVPKPMDRSLRSILAEQSELSPIKPCQTNPFRT 1326
Query: 300 TNPISPRDAMPSV--VYSR---ESLHPNSSSPVRSKRSDANLMCEISHPRWDLGPRSDRS 354
+ P +A+ ++ ++ R ++ +SPV S RS + E S P PR S
Sbjct: 1327 STPSKEDEALGALGPLHHRLLSSNVRSLGNSPVHSGRSTPRELLESSQPAGGGTPRGRHS 1386
>AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 25.0 bits (52), Expect = 3.7
Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 12/83 (14%)
Query: 256 NPNPHSLSRASHNSVHPQPQLRRGLDPVSERPSRKQARTEPRTVTNPISPRDAMPSVVYS 315
NPN S S P P L +P + P + + T+ R P +
Sbjct: 148 NPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKLASYTDQR------------PPQQFQ 195
Query: 316 RESLHPNSSSPVRSKRSDANLMC 338
++ P P +S+R L C
Sbjct: 196 QQQRQPQYLQPQQSQRQQEELTC 218
>AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 25.0 bits (52), Expect = 3.7
Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 12/83 (14%)
Query: 256 NPNPHSLSRASHNSVHPQPQLRRGLDPVSERPSRKQARTEPRTVTNPISPRDAMPSVVYS 315
NPN S S P P L +P + P + + T+ R P +
Sbjct: 148 NPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKLASYTDQR------------PPQQFQ 195
Query: 316 RESLHPNSSSPVRSKRSDANLMC 338
++ P P +S+R L C
Sbjct: 196 QQQRQPQYLQPQQSQRQQEELTC 218
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 25.0 bits (52), Expect = 3.7
Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 12/83 (14%)
Query: 256 NPNPHSLSRASHNSVHPQPQLRRGLDPVSERPSRKQARTEPRTVTNPISPRDAMPSVVYS 315
NPN S S P P L +P + P + + T+ R P +
Sbjct: 219 NPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKLASYTDQR------------PPQQFQ 266
Query: 316 RESLHPNSSSPVRSKRSDANLMC 338
++ P P +S+R L C
Sbjct: 267 QQQRQPQYLQPQQSQRQQEELTC 289
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 25.0 bits (52), Expect = 3.7
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 122 DARHRVASHLQRNIDRNCRVLKRASASLNLRLPRARVQPVAI 163
+A R+ S LQR D C +L +A L P R+ P A+
Sbjct: 1008 EAAKRITSKLQRCWDDECAIL---AAQAMLEEPANRLDPEAV 1046
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 24.6 bits (51), Expect = 4.9
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 12/83 (14%)
Query: 256 NPNPHSLSRASHNSVHPQPQLRRGLDPVSERPSRKQARTEPRTVTNPISPRDAMPSVVYS 315
NPN S S P P L +P + P + + T+ R P++ +
Sbjct: 220 NPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKLASYTDQR------QPQE------FQ 267
Query: 316 RESLHPNSSSPVRSKRSDANLMC 338
++ P P +S+R L C
Sbjct: 268 QQQRQPQYLQPQQSQRQQEELTC 290
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 24.2 bits (50), Expect = 6.5
Identities = 14/46 (30%), Positives = 17/46 (36%)
Query: 286 RPSRKQARTEPRTVTNPISPRDAMPSVVYSRESLHPNSSSPVRSKR 331
R ++AR NP A RES HP VR +R
Sbjct: 1073 RRRERRAREREAQQQNPSLVFSASSEATEGRESAHPERREQVRPQR 1118
>AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 23.8 bits (49), Expect = 8.5
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 256 NPNPHSLSRASHNSVHPQPQLRRGLDPVSERPSRKQARTEPR 297
NPN S S P P L +P + P + + T+ R
Sbjct: 149 NPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKLASYTDQR 190
>AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 23.8 bits (49), Expect = 8.5
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 256 NPNPHSLSRASHNSVHPQPQLRRGLDPVSERPSRKQARTEPR 297
NPN S S P P L +P + P + + T+ R
Sbjct: 149 NPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKLASYTDQR 190
>AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.8 bits (49), Expect = 8.5
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 256 NPNPHSLSRASHNSVHPQPQLRRGLDPVSERPSRKQARTEPR 297
NPN S S P P L +P + P + + T+ R
Sbjct: 148 NPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKLASYTDQR 189
>AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.8 bits (49), Expect = 8.5
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 256 NPNPHSLSRASHNSVHPQPQLRRGLDPVSERPSRKQARTEPR 297
NPN S S P P L +P + P + + T+ R
Sbjct: 148 NPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKLASYTDQR 189
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.316 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,835
Number of Sequences: 2123
Number of extensions: 14497
Number of successful extensions: 40
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 15
length of query: 405
length of database: 516,269
effective HSP length: 66
effective length of query: 339
effective length of database: 376,151
effective search space: 127515189
effective search space used: 127515189
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)
- SilkBase 1999-2023 -