Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002507-TA|BGIBMGA002507-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
(634 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 65 3e-11
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 54 8e-08
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 50 1e-06
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 46 1e-05
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 45 3e-05
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 42 2e-04
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 42 3e-04
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 40 0.001
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 35 0.039
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 33 0.091
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 33 0.091
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 33 0.16
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 32 0.28
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 29 2.0
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 2.6
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 2.6
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 28 3.4
SPBC16D10.01c ||SPBC418.03c|conserved fungal protein|Schizosacch... 27 6.0
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 6.0
SPCC16A11.16c |||ARM1 family|Schizosaccharomyces pombe|chr 3|||M... 27 6.0
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 27 6.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 6.0
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 27 7.9
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 27 7.9
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 64.9 bits (151), Expect = 3e-11
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 380 PGWDFVAEDFEGTMVVRTMCLECEAVTQKAQAVCELCXXXXXXXXXXXXFRAACLSTEYL 439
P W V FEGT+ T CL CE +T + ++ +L R+ S E L
Sbjct: 227 PKW--VHSLFEGTLTSETKCLTCENITSRDESFLDLSIDIENHTSVTSCLRSFSAS-EML 283
Query: 440 RDQNKYWCERCLRYNEARRSVTYSRLPRLLVLQLKRF-----SGGMEKITRHAPTPLLMP 494
+NK+ C+ C EA + + +LP++L L LKRF G +K+ M
Sbjct: 284 SSKNKFHCDVCKSLQEAEKRMKIKKLPKILSLHLKRFKYNETQEGHDKLFYTIVFTNEMR 343
Query: 495 CFCEPCASRPPERAPQHRYILWAVIMHLGQTLTGGHYVAYAR 536
F + E A + Y L +VI+H+G GHYV+ R
Sbjct: 344 LF---TTTEDAENA-ERMYYLSSVIVHVGGGPHRGHYVSIVR 381
Score = 41.9 bits (94), Expect = 3e-04
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 17/173 (9%)
Query: 144 LSNLGNTCFLNSVLYTLRYAPRFLHNLHHLVSDLASVEQKLGSIRLK------SSSLGRS 197
L+N GNTC+++SVL +L + F +L+ L S S+ K SSS
Sbjct: 43 LTNYGNTCYVSSVLVSLYHLKPFRDSLNSY--PLPSAPPNFKSVCTKTNHPESSSSRHSK 100
Query: 198 AAGLVSSGTRSWSSKDLLSLGQSD----NSSGKSKIQIATEKLHETYFNLRAAENKCLNS 253
+ + + + S + S G D S +K QI + + + + ++ CL
Sbjct: 101 KKSMENRKSSLYGSNGINSCGCVDISNVGSESGTKHQIVVGESNCSAYGMKENIYTCLKD 160
Query: 254 TNSEAT--PEPY---AADAFLAALRDVNSTFEGNRQQDAHELLVCILDNIRET 301
+ Y + + F+ LR N F +QQDAHE +L+++ ET
Sbjct: 161 LYCSVSCCDCRYGICSPERFIQVLRRDNEAFRSTQQQDAHEFFNFLLNSVTET 213
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 591 WLACDDELVKPISNEEFEDLLSAEPKMRSAATPYLLFYVKSE 632
W+ DDE V P++ + +P AT Y+LFY ++
Sbjct: 387 WVLFDDENVTPVNENYLQRFFGDQP---GQATAYVLFYTAAD 425
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 53.6 bits (123), Expect = 8e-08
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 10/150 (6%)
Query: 389 FEGTMVVRTMCLECEAVTQKAQAVCELCXXXXXXXXXXXXFRAACLSTEYLRDQNKYWCE 448
F G M C++ + + + ++ FR A + E L NKY+ E
Sbjct: 340 FVGKMKSYVKCIDVNYESSRVEDFWDIQLNVKGMDTLEDSFRDA-IQVETLTGDNKYYAE 398
Query: 449 RCLRYNEARRSVTYSRLPRLLVLQLKRFS-----GGMEKITRHAPTPLLMPCFCEPCASR 503
+A + + + LP +L LQLKRF M KI PL + EP S
Sbjct: 399 GH-GLQDAHKGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHEFPLEID--LEPYLSE 455
Query: 504 PPERAPQHRYILWAVIMHLGQTLTGGHYVA 533
+++ H Y+L V++H G L GGHY A
Sbjct: 456 TADKSESHVYVLHGVLVH-GGDLHGGHYYA 484
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 136 QKKMPVSSLSNLGNTCFLNSVLYTLRYAPRFLHNLHHLVSD 176
+K+ L N G TC++NS+L +L + F ++ + +D
Sbjct: 224 KKETGYVGLKNQGATCYMNSLLQSLFFTNIFRKTVYKIPTD 264
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 49.6 bits (113), Expect = 1e-06
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 389 FEGTMVVRTMCLECEAVTQKAQAVCELCXXXXXXXXXXXXFRAACLSTEYLRDQNKYWCE 448
F G + + +C C+ + QA+ +L + E L QNKY CE
Sbjct: 251 FGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGSSLADSLKHF--VHAEKLTKQNKYRCE 308
Query: 449 RCLRYNEARRSVTYSRLPRLLVLQLKRFS-GGME--KITRHAPTP---LLMPCFCEPCAS 502
C + +A + +T R P +L + KRF+ G + KI++ P L P +P S
Sbjct: 309 NCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGPYMSDPNCS 368
Query: 503 RPPERAPQHRYILWAVIMHLGQTLTGGHYVAYARDSS 539
Y L V++H G + GHY ++ + S+
Sbjct: 369 --------CWYELIGVLVHAGGSTRSGHYYSFCKSSN 397
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 144 LSNLGNTCFLNSVLYTLRYAPRFLHNL 170
L NLGNTCF+NSVL + P + L
Sbjct: 127 LVNLGNTCFMNSVLQLMTQTPPLVQYL 153
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 272 LRDVNSTFEGNRQQDAHELLVCILDNIRETC 302
L+ ++S F RQ+DAHE + ++D +++C
Sbjct: 200 LKVISSHFRPYRQEDAHEFMRYLVDAWQKSC 230
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 46.4 bits (105), Expect = 1e-05
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 436 TEYLRDQNKYWCERCLRYNEARRSVTYSRLPRLLVLQLKRFSGG---MEKITRHAPTPL- 491
TE L +++ ++C C + +A + + R P +L+ LKRFS +KI P+
Sbjct: 837 TEQLGEEDPWYCPTCKEFRQASKQMEIWRCPEILIFHLKRFSSERRFRDKIDDLVEFPID 896
Query: 492 -LMPCFCEPCASRPPERAPQHRYILWAVIMHLGQTLTGGHYVAYARD 537
L + P+ Y L+AV H G L GGHY A+A++
Sbjct: 897 NLDMSMRTGSYKLSEKENPKLIYELYAVDNHYG-GLGGGHYTAFAKN 942
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 136 QKKMP-VSSLSNLGNTCFLNSVLYTLRY 162
+K++P LSNLGNTC++NS L L +
Sbjct: 304 EKRVPGTCGLSNLGNTCYMNSALQCLTH 331
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 263 YAADAFLAALRDVNSTFEGNRQQDAHELLVCILDNIRE 300
+A F A + N +F G QQD+ E L +LD + E
Sbjct: 379 FAPRQFKATIGKFNHSFLGYGQQDSQEFLAFLLDGLHE 416
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 45.2 bits (102), Expect = 3e-05
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 437 EYLRDQNKYWCERCLRYNEARRSVTYSRLPRLLVLQLKRFSGGMEKITR---------HA 487
E L Q+ ++C C + A + + RLP++LV+ L RFSG + R +
Sbjct: 703 EQLDLQDSWYCPGCKAFRPATKRLEIWRLPKILVIHLNRFSGHGGDLRRRRKRRDLVVYP 762
Query: 488 PTPLLMPCFCEPCASRPPERAPQHR--YILWAVIMHLGQTLTGGHYVAYARDSS 539
L + F P + Q Y L+AV H G ++ GHY AYARD+S
Sbjct: 763 VFDLNLKQFLSPFIKDHEWLSSQKSMLYDLYAVDNHHG-FMSNGHYTAYARDAS 815
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 267 AFLAALRDVNSTFEGNRQQDAHELLVCILDNIRE 300
+F + + N+ F G RQQD+ E + LD + E
Sbjct: 352 SFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLHE 385
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 135 VQKKMPVSSLSNLGNTCFLNSVL 157
+ K++ + L NLGN+C++NS L
Sbjct: 272 INKEIGLCGLYNLGNSCYMNSAL 294
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 42.3 bits (95), Expect = 2e-04
Identities = 40/163 (24%), Positives = 63/163 (38%), Gaps = 11/163 (6%)
Query: 379 RPGWDFVAEDFEGTMVVRTMCLECEAVTQKAQAVCELCXXXXXXXXXXXXFRAACL---- 434
R V +F G + RT C+ C + L CL
Sbjct: 219 RSNKSIVVNNFVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVVSL--QECLLKFS 276
Query: 435 STEYLRDQNKYWCERCLRYNEARRSVTYSRLPRLLVLQLKRFS---GGMEKITRHAPTPL 491
+ E L+ + + C C A++ + S+LP L++Q++RF G +KI L
Sbjct: 277 APELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISVMGRKKIDTPLGLSL 336
Query: 492 LMPC-FCEPCASRPPERAPQHRYILWAVIMHLGQTLTGGHYVA 533
+P P + + Y L+A I H GQ L GHY++
Sbjct: 337 QIPSKMLVPPSFQSGIGYIPSNYNLFAFICHYGQ-LENGHYIS 378
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 144 LSNLGNTCFLNSVLYTLRYAPRFLHNLHHLVSDLASVEQK--LGS-IRLKSSSLGRSAAG 200
L+NLGNTC++N VL L + L ++ K LG+ ++ S+ +
Sbjct: 74 LTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITSAFFSLLQSV 133
Query: 201 LVSSGTRSWSSKDLLSLGQSDN 222
L++ G RS S ++ L + QS N
Sbjct: 134 LLNHGQRSISPRNFLEIVQSLN 155
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 433 CLSTEYLRDQNKYWCERCLRYNEARRSVTYSRLPRLLVLQLKRFSGGMEKITRHAPTPLL 492
CL +++ +Y C C N A + + + +LP + +QLKRF ++ +
Sbjct: 303 CLERFVSKEKVQYSCHSCGSKN-AIKQLVFDKLPPTICMQLKRFEQNNFAMSTKIDKQVS 361
Query: 493 MPCFCEPCASRPPERAPQHRYILWAVIMHLGQTLTGGHYVAY 534
P F R Y L++V+ H G TL GHY+AY
Sbjct: 362 YPAFLR---MRYNFNQDDVDYQLYSVVCHKG-TLDTGHYIAY 399
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 39.9 bits (89), Expect = 0.001
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 434 LSTEYLRDQNKYWCERCLRYNEARRSVTYSRLPRLLVLQLKRFSGGME-----KITRHAP 488
+ E L N Y+ + + EA++ V + P +L LQLKRF E KI
Sbjct: 367 IQVETLEGDNCYFADT-YGFQEAKKGVIFESFPPILHLQLKRFEYDFERDMMIKINDRYE 425
Query: 489 TPLLMPCFCEPCASRPPERAPQHRYILWAVIMHLGQTLTGGHYVA 533
PL + S +++ Y+L+ V++H G L GHY A
Sbjct: 426 FPLEFD--AKAFLSPEADQSQNCEYVLYGVLVHSGD-LHNGHYYA 467
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 34.7 bits (76), Expect = 0.039
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 456 ARRSVTYSRLPRLLVLQLKRF----SGGMEKITRHAPTPLLMPCFCEPCASRPPERAPQH 511
A + + LP +L+L LKRF SGG +K + P + P R H
Sbjct: 376 ATKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPARLSI--PQNVFSPSVRGSIH 433
Query: 512 -RYILWAVIMHLGQTLTGGHY 531
Y L AV+ H G + +GGHY
Sbjct: 434 PEYDLNAVVYHHGTSASGGHY 454
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 146 NLGNTCFLNSVLYTLRYAPRFLHNLHHL 173
N GN CF+NS+L L Y F + L +
Sbjct: 137 NTGNICFMNSILQALMYCVPFYNLLKQI 164
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 33.5 bits (73), Expect = 0.091
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 19/158 (12%)
Query: 385 VAEDFEGTMVVRTMCLECEAVT--QKAQAVCELCXXXXXXXXXXXXFRAACLSTEYLRDQ 442
V F GTM + C +C A++ +LC + + + +
Sbjct: 160 VDSPFIGTMEQKVQCCQCLAISISYSTATSIQLCLPPEYSGNSNVSL-LSLMEADREQHI 218
Query: 443 NKYWCERCLRYNEAR------RSVTYSRLPRLLVLQLKRFSGGMEKITRHAPTPLLMPCF 496
+ Y C+ C + + R+V + P +L +QL+R S + +TR+ + F
Sbjct: 219 SDYKCDSCFKSSPKHSKTSCIRTVDWKNPPTILQIQLERTSYTCQGLTRNN----VSISF 274
Query: 497 CEPCASRPPERAPQHRYILWAVIMHLGQTLTGGHYVAY 534
+ +H YIL ++I H G ++T GHY+ Y
Sbjct: 275 PSKLILK-----NKHHYILRSLITHSG-SVTYGHYLCY 306
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 33.5 bits (73), Expect = 0.091
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 256 SEATPEPYAADAFLAALRDVNSTFEGNRQQDAHELLVCILDN-IRETCRAL 305
S+ T Y F R ++ F + QQDAHELL +LD+ I E R L
Sbjct: 273 SDGTISVYRPTTFFGEFRRLHPQFSESVQQDAHELLRLLLDDLISEEFRVL 323
Score = 32.3 bits (70), Expect = 0.21
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 13/103 (12%)
Query: 441 DQNKYWCERCLRYNEARRSVTYSRLPRLLVLQLKRFSGGMEKITRHA-PTPLLMPCFCEP 499
D +KY + N +R + LP + ++ LKRF ++I+ P + F E
Sbjct: 718 DNDKYSFNNSVYRNAYKRMLLDDPLPPVFIIHLKRF---FQEISHDGYANPKKISDFIEF 774
Query: 500 CAS-------RPPERAPQH-RYILWAVIMHLGQTLTGGHYVAY 534
P RA RY L+ VI+H G TL GHYVAY
Sbjct: 775 EQELDLNEFVMPHLRASSSFRYRLFGVIVHSG-TLNYGHYVAY 816
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 133 GGVQKKMPVSS--LSNLGNTCFLNSVLYTL 160
G KK V S L NLG TCF NS L L
Sbjct: 197 GKSSKKYKVISPGLKNLGATCFFNSTLQVL 226
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 32.7 bits (71), Expect = 0.16
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 433 CLSTEYLRDQNKYWCERCLRYNEARRSVTYSRLPRLLVLQLKRF 476
CL DQ +Y CE C A + P++L+LQ RF
Sbjct: 486 CLDATIQPDQMEYTCEACKSKLGATTTTAMKSFPKVLILQANRF 529
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 141 VSSLSNLGNTCFLNSVLYTLRYAPRF-LHNLHHLVSDLASVEQKLGSIRLKSSSLGRSAA 199
++ L NLGN+C+L S + +L F +H L +L + SV Q + L+ LG+ A
Sbjct: 299 LTGLKNLGNSCYLASTMQSLFSIKEFAIHEL-NLFNTYNSVCQ-TPTTDLQ-CQLGKLAD 355
Query: 200 GLVS 203
GLVS
Sbjct: 356 GLVS 359
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 513 YILWAVIMHLGQTLTGGHYVAYAR 536
Y L A+I H G + GHYVA+ R
Sbjct: 713 YNLKAIISHKGSSAHAGHYVAFIR 736
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 142 SSLSNLGNTCFLNSVLYTLRYAP 164
S L NLGNTC++NS + LR P
Sbjct: 100 SGLINLGNTCYMNSTVQMLRAIP 122
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 509 PQHRYILWAVIMHLGQTLTGGHYVAYARDSS 539
P Y L V+ H G + + GHY A+ R+S+
Sbjct: 393 PTGLYDLVGVLSHAGASASSGHYQAWIRNSN 423
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 338 LGNLRKSWKKRKEIKAINDKRNSPTEEREPSPVDAEKDERS 378
L N S + + K ND+RN P + R P D + D+ S
Sbjct: 99 LANRYNSHRPERRRKTNNDRRNYPPQNRTAKPNDNDGDDYS 139
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/92 (20%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Query: 54 KENKPLKRPLKSIYSNTXXXXXXXXXXXXXXXXXGPTVNRDTATLKHSDRTLNPELAILE 113
++NK +K ++S +++T ++D +TL S +++ E+ + E
Sbjct: 151 RDNKSMKSFVRSFFTSTDSSVADTTIIPSMTQQF----DKDPSTLVQS--SIDKEIQVKE 204
Query: 114 EGESSSVMLNGHHPPDTQYGGVQKKMPVSSLS 145
+G +SSV +N G +++ S+S
Sbjct: 205 DGTTSSVAVNAETAVQNVNGTIKESQGTESIS 236
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 191 SSSLGRSAAGLVSSGTRSWSSKDLLSLGQSDNSSGKSKIQIATEKLHETYFNLRAAENKC 250
SSS S++ SS S SSK S S +SS SK ++ ++ + ++ +K
Sbjct: 150 SSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKS-SSSSSSSSKS 208
Query: 251 LNSTNSEATPEPYAADAFLAALRDVNSTFEG 281
S +S + +++ +F+ + +S+ G
Sbjct: 209 SASPSSSKSSSKFSSSSFITSTTPASSSSSG 239
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 197 SAAGLVSSGTRSWSSKDLLSLGQSDNSSGKSKIQIATEKLHE--TYFNLRAAENKCLNST 254
S+ L S S + +LL + D+S+ AT L++ +Y+N R++ + N T
Sbjct: 463 SSPPLTSPVKTSANIPNLLPTSELDSSNAPHSQSAATHDLNDVKSYYNTRSSHSVVPNPT 522
Query: 255 NSEATPEPYAAD 266
N + + AAD
Sbjct: 523 NQKVSITGAAAD 534
>SPBC16D10.01c ||SPBC418.03c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 227 SKIQIATEKLHETYFNLRAAENKCLNSTNSEATPEPYAADAFLAALRDVNSTFEGNRQQD 286
+ ++I+ +K+ E + A +KCL S + AT + + V E ++
Sbjct: 169 ASMRISQQKIEEA----KDALSKCLQSISRAATEDSVDLPTYAVRTSIVRLLIEVEMHEE 224
Query: 287 AHELLV 292
AH+LLV
Sbjct: 225 AHQLLV 230
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.5 bits (58), Expect = 6.0
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 173 LVSDLASVEQKLGSIRLKSSSLGRSAAGLVSSGTRSWSSKDLLSLGQSDNS-SGKSKIQI 231
L S L ++E S+RL +SSLG L + K+ L L S NS ++ I
Sbjct: 440 LESKLQTLEDDNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLRLLASKNSDKALAETNI 499
Query: 232 ATEKLHETYFNLRAAENKCLN 252
+++ + LR + LN
Sbjct: 500 RLQEVTKELETLRMKNSNDLN 520
>SPCC16A11.16c |||ARM1 family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 388
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 180 VEQKLGSIRLKSSSLGRSAAGLVSSGTRSWSSKDLLSLGQSDNSSGKSKIQIATEKLHET 239
+E G +R ++S G+ GLVS K ++ Q+D+ G +Q+A+++L
Sbjct: 1 MESVFGRVRNETSERGKY--GLVSVKAGKLQRKPGTNILQADHRKGVIYMQMASDELLHF 58
Query: 240 YFNLRA 245
Y+ RA
Sbjct: 59 YWKERA 64
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 224 SGKSKIQIATEKLHETYFNLRAAENKCLNSTNSEA---TPEPYAADAFLAALRDVN 276
S KS I T+ + Y N RAA N NS NSEA T D F L +++
Sbjct: 98 SPKSAISCVTQPVSPVY-NTRAAANLRNNSINSEAALSTTSSLLDDDFARRLEEID 152
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 191 SSSLGRSAAGLVSSGTRSWSSKDLLSLGQSDNSSGKSKIQIATEKLHETYFNLRAAENKC 250
+SS+ S SS SWSS + + +++G S IAT + + + A +
Sbjct: 938 TSSVAASVTPTSSSSASSWSSSSEVDPSTAASATGSSTSSIATASVSGSSTSSVATASAT 997
Query: 251 LNSTNSEA 258
+ST+S A
Sbjct: 998 DSSTSSIA 1005
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 27.1 bits (57), Expect = 7.9
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 324 GRQPSLDGDNGKPTLGNLRKSWKKRKE-IKAINDKRNSPTEEREPSPVDAEKD-ERSR 379
GR+ D LG L +++KR + +KAI+ + S TE R P + KD E+S+
Sbjct: 328 GRELRADFKLIAKALGRLGTTYQKRGDLVKAIDYYQRSLTEHRTPDILSRLKDAEKSK 385
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 27.1 bits (57), Expect = 7.9
Identities = 24/101 (23%), Positives = 40/101 (39%)
Query: 190 KSSSLGRSAAGLVSSGTRSWSSKDLLSLGQSDNSSGKSKIQIATEKLHETYFNLRAAENK 249
K+S ++ A +++ T ++ + S + Q A E L +
Sbjct: 530 KASKSKKAKASKLANDTSKNANGETKSTPKKSKKKTSKAQQEANSTTAEGKEKLSGDSTE 589
Query: 250 CLNSTNSEATPEPYAADAFLAALRDVNSTFEGNRQQDAHEL 290
NSTN EA+ E A+A +A T E +QQ E+
Sbjct: 590 TGNSTNKEASTEDTKANATASAPNKKKKTVETLQQQVIKEI 630
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.131 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,804,067
Number of Sequences: 5004
Number of extensions: 113692
Number of successful extensions: 366
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 318
Number of HSP's gapped (non-prelim): 53
length of query: 634
length of database: 2,362,478
effective HSP length: 77
effective length of query: 557
effective length of database: 1,977,170
effective search space: 1101283690
effective search space used: 1101283690
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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