GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002507-TA|BGIBMGA002507-PA|IPR001394|Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
         (634 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    29   0.50 
Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    28   0.66 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    27   2.0  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            26   3.5  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    26   3.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   3.5  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    25   4.6  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            25   8.1  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            25   8.1  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            25   8.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   8.1  

>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 0.50
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 438 YLRDQNKYWCERCLRYNEARRSVTYSRL 465
           YLR ++ YW +RC  Y   +  + Y  +
Sbjct: 21  YLRSRHNYWRDRCFPYTRQKPHLLYGHM 48


>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 28.3 bits (60), Expect = 0.66
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 300 ETCRALSARAARLQMHENGDSNGIGRQPSLDGDNGKPTL 338
           + CR++  RA+R+    N    G G+Q S  GD+G P L
Sbjct: 161 DQCRSMKYRASRIT--SNMLCAGKGKQDSCQGDSGGPLL 197


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.6 bits (56), Expect = 2.0
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 207  RSWSSKDLLSLGQSDNSSGKSKIQIATEKLHETYFNLRAAENKCLNSTNSEAT 259
            R WS   L S+G    +S +S   IA +   +  F L+  +N+  NS+N+  T
Sbjct: 1309 RRWSMA-LSSMGGHSQTSAQSLQSIAGQTERKISFVLQEPDNESENSSNTTLT 1360



 Score = 25.4 bits (53), Expect = 4.6
 Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)

Query: 169  NLHHLVSDLASVEQKLGSIRLKSSSLGRSAAGLVSSGTRSWSSKDLLSLGQSDNSSGKSK 228
            +L H VS  ASV+ +   +R  SS   ++++G  S+   +  S D L+   S  +  K +
Sbjct: 3108 HLSHSVSLQASVKTQPPRLRFVSSVEFKTSSGETST---TPLSPDSLADDSSGENHNKHR 3164

Query: 229  IQIATEKLHETYFNLRAAENKCLNSTNSEATPEPYAADAFLAALRDVNSTFEG 281
            +Q +  +  +T+ N R   +    S  S A P   A  A LA +    ST  G
Sbjct: 3165 LQRSRAQSRKTFRNRRGMRSNNF-SEPSYAIP-TVAGGAGLAMVGAGGSTAPG 3215


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.8 bits (54), Expect = 3.5
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 201 LVSSGTRSWSSKDLLSLGQSDNSSGKSKIQIATEKLHETY 240
           +  +GT +  +  + S G   NSS  S     TE  HE +
Sbjct: 87  IAKTGTGATPTSSIASSGDDTNSSNNSTTSNGTEDRHECF 126


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.8 bits (54), Expect = 3.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 177 LASVEQKLGSIRLKSSSLGRSAAGLVSSGT 206
           LA+VE+KL  ++ KSS    +A  L ++ T
Sbjct: 764 LANVEKKLAEVKAKSSDKNSTARALCANKT 793


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.8 bits (54), Expect = 3.5
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query: 263 YAADAFLAALRDVNSTFEGNRQQDAHELLVCILDNIRETCRALSARAAR 311
           +  ++FL AL+DVN   +     D  E++    D + +    LS+   R
Sbjct: 252 FRENSFLLALKDVNFAEQAVTDADIVEMMTRACDEVMQRANHLSSNPYR 300


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 25.4 bits (53), Expect = 4.6
 Identities = 17/51 (33%), Positives = 22/51 (43%)

Query: 211 SKDLLSLGQSDNSSGKSKIQIATEKLHETYFNLRAAENKCLNSTNSEATPE 261
           S D L  G    SSG + I     K  E    LRA   K + + +S  TP+
Sbjct: 317 SMDSLFAGVDTTSSGSTGILYCLAKNPEKQEKLRAELRKIMPNKDSPLTPD 367


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.6 bits (51), Expect = 8.1
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 201 LVSSGTRSWSSKDLLSLGQSDNSSGKSKIQIATEKLHETY 240
           +  +GT    +  + S G   NSS  S     TE  HE +
Sbjct: 87  IAKTGTGVTPTSSIASSGDDTNSSNNSTTSNGTEDRHECF 126


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.6 bits (51), Expect = 8.1
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 201 LVSSGTRSWSSKDLLSLGQSDNSSGKSKIQIATEKLHETY 240
           +  +GT    +  + S G   NSS  S     TE  HE +
Sbjct: 87  IAKTGTGVTPTSSIASSGDDTNSSNNSTTSNGTEDRHECF 126


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.6 bits (51), Expect = 8.1
 Identities = 12/40 (30%), Positives = 17/40 (42%)

Query: 201 LVSSGTRSWSSKDLLSLGQSDNSSGKSKIQIATEKLHETY 240
           +  +GT    +  + S G   NSS  S     TE  HE +
Sbjct: 87  IAKTGTGVTPTSSIASSGDDTNSSNNSTTSNGTEDRHECF 126


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.6 bits (51), Expect = 8.1
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)

Query: 453 YNEARRSVTYSRLPRLLVLQLKRFSGGMEKITRHA 487
           Y +A  SV +S L  L VLQL +  G + K+ +HA
Sbjct: 607 YKKAYDSVPHSYL--LKVLQLYKVDGNVIKLMQHA 639


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,884
Number of Sequences: 2123
Number of extensions: 25526
Number of successful extensions: 56
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 44
Number of HSP's gapped (non-prelim): 14
length of query: 634
length of database: 516,269
effective HSP length: 68
effective length of query: 566
effective length of database: 371,905
effective search space: 210498230
effective search space used: 210498230
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)