BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002505-TA|BGIBMGA002505-PA|undefined
(107 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007262-1|AAP35926.1| 686|Homo sapiens cleft lip and palate as... 29 2.1
BC004865-1|AAH04865.1| 686|Homo sapiens CLPTM1 protein protein. 29 2.1
Y11416-3|CAA72221.1| 588|Homo sapiens P73 protein. 29 3.7
Y11416-2|CAA72219.1| 499|Homo sapiens P73 protein. 29 3.7
Y11416-1|CAA72220.1| 636|Homo sapiens P53-like transcription fa... 29 3.7
BC117253-1|AAI17254.1| 636|Homo sapiens tumor protein p73 protein. 29 3.7
BC117251-1|AAI17252.1| 636|Homo sapiens tumor protein p73 protein. 29 3.7
AL136528-6|CAI19126.1| 499|Homo sapiens tumor protein p73 protein. 29 3.7
AL136528-5|CAI19127.1| 636|Homo sapiens tumor protein p73 protein. 29 3.7
AF079094-1|AAD39696.1| 636|Homo sapiens p73 protein. 29 3.7
AF077628-1|AAC61887.1| 636|Homo sapiens p73 protein. 29 3.7
AY129027-1|AAM98770.1| 178|Homo sapiens unknown protein. 28 6.4
AK131452-1|BAD18597.1| 534|Homo sapiens protein ( Homo sapiens ... 28 6.4
AK127750-1|BAC87113.1| 544|Homo sapiens protein ( Homo sapiens ... 28 6.4
AK023989-1|BAB14758.1| 330|Homo sapiens protein ( Homo sapiens ... 28 6.4
AF060503-1|AAC33716.1| 553|Homo sapiens zinc finger protein pro... 28 6.4
U13696-1|AAA63923.1| 862|Homo sapiens hPMS2 protein. 27 8.5
BC093921-1|AAH93921.1| 862|Homo sapiens PMS2 postmeiotic segreg... 27 8.5
BC035761-1|AAH35761.1| 1033|Homo sapiens SEC24 related gene fami... 27 8.5
BC031832-1|AAH31832.1| 879|Homo sapiens PMS2 protein protein. 27 8.5
AY040829-1|AAK81886.1| 426|Homo sapiens DN p73 gamma protein. 27 8.5
AY040828-1|AAK81885.1| 450|Homo sapiens DN p73 beta protein. 27 8.5
AY040827-1|AAK81884.1| 587|Homo sapiens DN p73 alpha protein. 27 8.5
AL136528-4|CAI19125.1| 426|Homo sapiens tumor protein p73 protein. 27 8.5
AL136528-3|CAI19124.1| 450|Homo sapiens tumor protein p73 protein. 27 8.5
AL136528-2|CAI19123.1| 587|Homo sapiens tumor protein p73 protein. 27 8.5
AF130464-1|AAD28756.2| 1032|Homo sapiens sec24D protein protein. 27 8.5
AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein. 27 8.5
AC108030-1|AAY40935.1| 570|Homo sapiens unknown protein. 27 8.5
AC005995-3|AAS00390.1| 862|Homo sapiens unknown protein. 27 8.5
AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domai... 27 8.5
AB103086-1|BAD89429.1| 756|Homo sapiens postmeiotic segregation... 27 8.5
AB103082-1|BAD89425.1| 572|Homo sapiens postmeiotic segregation... 27 8.5
AB055066-1|BAB87245.1| 450|Homo sapiens deltaN p73 beta protein. 27 8.5
AB055065-1|BAB87244.1| 587|Homo sapiens deltaN p73 alpha protein. 27 8.5
AB018298-1|BAA34475.2| 1093|Homo sapiens KIAA0755 protein protein. 27 8.5
>BT007262-1|AAP35926.1| 686|Homo sapiens cleft lip and palate
associated transmembrane protein 1 protein.
Length = 686
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 31 SSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVSTHRRLQA 81
++T ++AS + T P+Q AS P G + L S VS+H L A
Sbjct: 629 TTTATREEASTSLPTKPTQGASSASEPQGLFVEALSVPLSLCVSSHLALPA 679
>BC004865-1|AAH04865.1| 686|Homo sapiens CLPTM1 protein protein.
Length = 686
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 31 SSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVSTHRRLQA 81
++T ++AS + T P+Q AS P G + L S VS+H L A
Sbjct: 629 TTTATREEASTSLPTKPTQGASSASEPQGLFVEALSVPLSLCVSSHLALPA 679
>Y11416-3|CAA72221.1| 588|Homo sapiens P73 protein.
Length = 588
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 24 ILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
++A + S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 13 VMAQFNLLSSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 60
>Y11416-2|CAA72219.1| 499|Homo sapiens P73 protein.
Length = 499
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 24 ILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
++A + S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 61 VMAQFNLLSSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 108
>Y11416-1|CAA72220.1| 636|Homo sapiens P53-like transcription
factor protein.
Length = 636
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 24 ILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
++A + S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 61 VMAQFNLLSSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 108
>BC117253-1|AAI17254.1| 636|Homo sapiens tumor protein p73 protein.
Length = 636
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 24 ILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
++A + S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 61 VMAQFNLLSSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 108
>BC117251-1|AAI17252.1| 636|Homo sapiens tumor protein p73 protein.
Length = 636
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 24 ILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
++A + S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 61 VMAQFNLLSSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 108
>AL136528-6|CAI19126.1| 499|Homo sapiens tumor protein p73 protein.
Length = 499
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 24 ILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
++A + S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 61 VMAQFNLLSSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 108
>AL136528-5|CAI19127.1| 636|Homo sapiens tumor protein p73 protein.
Length = 636
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 24 ILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
++A + S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 61 VMAQFNLLSSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 108
>AF079094-1|AAD39696.1| 636|Homo sapiens p73 protein.
Length = 636
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 24 ILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
++A + S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 61 VMAQFNLLSSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 108
>AF077628-1|AAC61887.1| 636|Homo sapiens p73 protein.
Length = 636
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 24 ILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
++A + S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 61 VMAQFNLLSSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 108
>AY129027-1|AAM98770.1| 178|Homo sapiens unknown protein.
Length = 178
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 18 GYHNPRIL-ADKSKSSTVVPQQASIAASTGPSQPTHRASW 56
GY P +L DK S P Q + + P+H SW
Sbjct: 76 GYLRPLLLPGDKGAKSHAAPMQPHVPDDGSQASPSHGCSW 115
>AK131452-1|BAD18597.1| 534|Homo sapiens protein ( Homo sapiens
cDNA FLJ16605 fis, clone TESTI4008302, highly similar
to Homo sapiens zinc finger protein (ZF5128). ).
Length = 534
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 49 QPTHRASWPYGTHLHCLIAQHSSSVSTHRRLQAALATIT--------QHSSSVSTHRKLR 100
Q H PY + +HSSS+ H+R+ A + H S++S HRK+
Sbjct: 294 QRIHSGETPYACPVCGKAFRHSSSLVRHQRIHTAEKSFRCSECGKAFSHGSNLSQHRKIH 353
Query: 101 A 101
A
Sbjct: 354 A 354
>AK127750-1|BAC87113.1| 544|Homo sapiens protein ( Homo sapiens
cDNA FLJ45850 fis, clone OCBBF2016928, highly similar
to Homo sapiens zinc finger protein (ZF5128). ).
Length = 544
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 49 QPTHRASWPYGTHLHCLIAQHSSSVSTHRRLQAALATIT--------QHSSSVSTHRKLR 100
Q H PY + +HSSS+ H+R+ A + H S++S HRK+
Sbjct: 304 QRIHSGETPYACPVCGKAFRHSSSLVRHQRIHTAEKSFRCSECGKAFSHGSNLSQHRKIH 363
Query: 101 A 101
A
Sbjct: 364 A 364
>AK023989-1|BAB14758.1| 330|Homo sapiens protein ( Homo sapiens
cDNA FLJ13927 fis, clone Y79AA1000627, moderately
similar to Homo sapiens zinc finger protein (ZF5128)
mRNA. ).
Length = 330
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 49 QPTHRASWPYGTHLHCLIAQHSSSVSTHRRLQAALATIT--------QHSSSVSTHRKLR 100
Q H PY + +HSSS+ H+R+ A + H S++S HRK+
Sbjct: 81 QRIHSGETPYACPVCGKAFRHSSSLVRHQRIHTAEKSFRCSECGKAFSHGSNLSQHRKIH 140
Query: 101 A 101
A
Sbjct: 141 A 141
>AF060503-1|AAC33716.1| 553|Homo sapiens zinc finger protein
protein.
Length = 553
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 49 QPTHRASWPYGTHLHCLIAQHSSSVSTHRRLQAALATIT--------QHSSSVSTHRKLR 100
Q H PY + +HSSS+ H+R+ A + H S++S HRK+
Sbjct: 304 QRIHSGETPYACPVCGKAFRHSSSLVRHQRIHTAEKSFRCSECGKAFSHGSNLSQHRKIH 363
Query: 101 A 101
A
Sbjct: 364 A 364
>U13696-1|AAA63923.1| 862|Homo sapiens hPMS2 protein.
Length = 862
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 29 SKSSTVVPQQASIAASTGPSQPTHRA 54
S + PQ+ ++++S GPS PT RA
Sbjct: 463 SDKGVLRPQKEAVSSSHGPSDPTDRA 488
>BC093921-1|AAH93921.1| 862|Homo sapiens PMS2 postmeiotic
segregation increased 2 (S. cerevisiae) protein.
Length = 862
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 29 SKSSTVVPQQASIAASTGPSQPTHRA 54
S + PQ+ ++++S GPS PT RA
Sbjct: 463 SDKGVLRPQKEAVSSSHGPSDPTDRA 488
>BC035761-1|AAH35761.1| 1033|Homo sapiens SEC24 related gene family,
member D (S. cerevisiae) protein.
Length = 1033
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 6 PPRPRGPRIKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQPTHRASWP 57
PP P P FG + + P ++A+S P QP+ ++S+P
Sbjct: 58 PPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSAQSSYP 109
>BC031832-1|AAH31832.1| 879|Homo sapiens PMS2 protein protein.
Length = 879
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 29 SKSSTVVPQQASIAASTGPSQPTHRA 54
S + PQ+ ++++S GPS PT RA
Sbjct: 480 SDKGVLRPQKEAVSSSHGPSDPTDRA 505
>AY040829-1|AAK81886.1| 426|Homo sapiens DN p73 gamma protein.
Length = 426
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 32 STVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 20 SSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 59
>AY040828-1|AAK81885.1| 450|Homo sapiens DN p73 beta protein.
Length = 450
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 32 STVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 20 SSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 59
>AY040827-1|AAK81884.1| 587|Homo sapiens DN p73 alpha protein.
Length = 587
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 32 STVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 20 SSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 59
>AL136528-4|CAI19125.1| 426|Homo sapiens tumor protein p73
protein.
Length = 426
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 32 STVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 20 SSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 59
>AL136528-3|CAI19124.1| 450|Homo sapiens tumor protein p73
protein.
Length = 450
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 32 STVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 20 SSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 59
>AL136528-2|CAI19123.1| 587|Homo sapiens tumor protein p73
protein.
Length = 587
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 32 STVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 20 SSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 59
>AF130464-1|AAD28756.2| 1032|Homo sapiens sec24D protein protein.
Length = 1032
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 6 PPRPRGPRIKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQPTHRASWP 57
PP P P FG + + P ++A+S P QP+ ++S+P
Sbjct: 58 PPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSAQSSYP 109
>AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.
Length = 3038
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 3 ASSPPRPRGPRIKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQP 50
A S R R RI H+P +L + SS + S ++ GPS P
Sbjct: 2271 APSTSRSRPSRIPQPVRHHPPVLVSSAASSQAEADKMSGTSTPGPSLP 2318
>AC108030-1|AAY40935.1| 570|Homo sapiens unknown protein.
Length = 570
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 6 PPRPRGPRIKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQPTHRASWP 57
PP P P FG + + P ++A+S P QP+ ++S+P
Sbjct: 58 PPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSAQSSYP 109
>AC005995-3|AAS00390.1| 862|Homo sapiens unknown protein.
Length = 862
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 29 SKSSTVVPQQASIAASTGPSQPTHRA 54
S + PQ+ ++++S GPS PT RA
Sbjct: 463 SDKGVLRPQKEAVSSSHGPSDPTDRA 488
>AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domain
(PTPRF interacting) variant protein.
Length = 2202
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 3 ASSPPRPRGPRIKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQP 50
A S R R RI H+P +L + SS + S ++ GPS P
Sbjct: 1969 APSTSRSRPSRIPQPVRHHPPVLVSSAASSQAEADKMSGTSTPGPSLP 2016
>AB103086-1|BAD89429.1| 756|Homo sapiens postmeiotic segregation
increased 2 nirs variant 5 protein.
Length = 756
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 29 SKSSTVVPQQASIAASTGPSQPTHRA 54
S + PQ+ ++++S GPS PT RA
Sbjct: 357 SDKGVLRPQKEAVSSSHGPSDPTDRA 382
>AB103082-1|BAD89425.1| 572|Homo sapiens postmeiotic segregation
increased 2 nirs variant 1 protein.
Length = 572
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 29 SKSSTVVPQQASIAASTGPSQPTHRA 54
S + PQ+ ++++S GPS PT RA
Sbjct: 463 SDKGVLRPQKEAVSSSHGPSDPTDRA 488
>AB055066-1|BAB87245.1| 450|Homo sapiens deltaN p73 beta protein.
Length = 450
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 32 STVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 20 SSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 59
>AB055065-1|BAB87244.1| 587|Homo sapiens deltaN p73 alpha
protein.
Length = 587
Score = 27.5 bits (58), Expect = 8.5
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 32 STVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 75
S+ + Q +S AAS P P H AS P H AQ SS+ T
Sbjct: 20 SSTMDQMSSRAASASPYTPEHAASVP----THSPYAQPSSTFDT 59
>AB018298-1|BAA34475.2| 1093|Homo sapiens KIAA0755 protein protein.
Length = 1093
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 6 PPRPRGPRIKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQPTHRASWP 57
PP P P FG + + P ++A+S P QP+ ++S+P
Sbjct: 119 PPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSAQSSYP 170
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.122 0.359
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,588,523
Number of Sequences: 224733
Number of extensions: 597361
Number of successful extensions: 1925
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1907
Number of HSP's gapped (non-prelim): 36
length of query: 107
length of database: 73,234,838
effective HSP length: 79
effective length of query: 28
effective length of database: 55,480,931
effective search space: 1553466068
effective search space used: 1553466068
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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