GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002504-TA|BGIBMGA002504-PA|IPR005225|Small GTP-binding
protein domain, IPR006687|GTP-binding protein SAR1, IPR006689|ARF/SAR
superfamily, IPR006688|ADP-ribosylation factor, IPR001806|Ras GTPase
         (193 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      41   2e-05
AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha su...    38   2e-04
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       37   5e-04
AY724807-1|AAW50316.1|  127|Anopheles gambiae G protein alpha su...    36   8e-04
AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha su...    36   8e-04
AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha su...    36   8e-04
AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha su...    35   0.002
AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha su...    35   0.002
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       33   0.006
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    26   0.64 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    26   0.64 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    26   0.64 
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           25   2.0  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          24   2.6  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          24   2.6  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          24   2.6  
AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha su...    24   3.4  
AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha su...    24   3.4  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   6.0  

>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 41.1 bits (92), Expect = 2e-05
 Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 11/123 (8%)

Query: 20  SGKLLFLGLDNAGKTTLLHMLKDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARR 79
           S K   + +D       L   + D L   VPT         +  +RF   D+GG +  RR
Sbjct: 150 SAKYYLMEIDRVAAPNYLPT-EQDILRVRVPTTGIIEYPFDLEEIRFRMVDVGGQRSERR 208

Query: 80  VWRDYFPAVDAIVFLV----------DACDRPRLPESKAELDSLLTDETLSNCPVLILGN 129
            W   F  V +I+FLV          ++ +  R+ ESKA   +++T     +  V++  N
Sbjct: 209 KWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALFKTIITYPWFQHSSVILFLN 268

Query: 130 KID 132
           K D
Sbjct: 269 KKD 271


>AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha
           subunit AgGq6 protein.
          Length = 206

 Score = 37.9 bits (84), Expect = 2e-04
 Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 10/102 (9%)

Query: 41  KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV----- 95
           + D L    PT         + S+ F   D+GG +  RR W   F  V +I+FLV     
Sbjct: 27  EQDILRARAPTTGILEYPFDLDSIIFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEY 86

Query: 96  -----DACDRPRLPESKAELDSLLTDETLSNCPVLILGNKID 132
                ++ +  R+ ESKA   +++T     +  V++  NK D
Sbjct: 87  DQILFESENENRMEESKALFKTIITYPWFQHSSVILFLNKKD 128


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 36.7 bits (81), Expect = 5e-04
 Identities = 19/55 (34%), Positives = 25/55 (45%)

Query: 41  KDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 95
           + D L   V T        S  S+ F  FD+GG +  R+ W   F  V AI+F V
Sbjct: 170 QQDVLRTRVKTTGIVETHFSFKSIHFKMFDVGGQRSERKKWIHCFEGVTAIIFCV 224



 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 22 KLLFLGLDNAGKTTLLHMLK 41
          KLL LG   +GK+T++  +K
Sbjct: 34 KLLLLGAGESGKSTIVKQMK 53


>AY724807-1|AAW50316.1|  127|Anopheles gambiae G protein alpha
           subunit AgGq5 protein.
          Length = 127

 Score = 35.9 bits (79), Expect = 8e-04
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 10/79 (12%)

Query: 64  MRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV----------DACDRPRLPESKAELDSL 113
           +RF   D+GG +  RR W   F  V +I+FLV          ++ +  R+ ESKA   ++
Sbjct: 7   IRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALFKTI 66

Query: 114 LTDETLSNCPVLILGNKID 132
           +T     +  V++  NK D
Sbjct: 67  ITYPWFQHSSVILFLNKKD 85


>AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq4 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 8e-04
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 10/79 (12%)

Query: 64  MRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV----------DACDRPRLPESKAELDSL 113
           +RF   D+GG +  RR W   F  V +I+FLV          ++ +  R+ ESKA   ++
Sbjct: 7   IRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALFKTI 66

Query: 114 LTDETLSNCPVLILGNKID 132
           +T     +  V++  NK D
Sbjct: 67  ITYPWFQHSSVILFLNKKD 85


>AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq2 protein.
          Length = 163

 Score = 35.9 bits (79), Expect = 8e-04
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 10/79 (12%)

Query: 64  MRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV----------DACDRPRLPESKAELDSL 113
           +RF   D+GG +  RR W   F  V +I+FLV          ++ +  R+ ESKA   ++
Sbjct: 7   IRFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALFKTI 66

Query: 114 LTDETLSNCPVLILGNKID 132
           +T     +  V++  NK D
Sbjct: 67  ITYPWFQHSSVILFLNKKD 85


>AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq3 protein.
          Length = 162

 Score = 34.7 bits (76), Expect = 0.002
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 10/82 (12%)

Query: 61  IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV----------DACDRPRLPESKAEL 110
           + S+ F   D+GG +  RR W   F  V +I+FLV          ++ +  R+ ESKA  
Sbjct: 3   LDSIIFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALF 62

Query: 111 DSLLTDETLSNCPVLILGNKID 132
            +++T     +  V++  NK D
Sbjct: 63  KTIITYPWFQHSSVILFLNKKD 84


>AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq1 protein.
          Length = 162

 Score = 34.7 bits (76), Expect = 0.002
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 10/82 (12%)

Query: 61  IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV----------DACDRPRLPESKAEL 110
           + S+ F   D+GG +  RR W   F  V +I+FLV          ++ +  R+ ESKA  
Sbjct: 3   LDSIIFRMVDVGGQRSERRKWIHCFENVTSIIFLVALSEYDQILFESENENRMEESKALF 62

Query: 111 DSLLTDETLSNCPVLILGNKID 132
            +++T     +  V++  NK D
Sbjct: 63  KTIITYPWFQHSSVILFLNKKD 84


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 33.1 bits (72), Expect = 0.006
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 61  IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDAC 98
           +  + F  FD+GG +  RR W   F  V AI+F V AC
Sbjct: 203 VDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIF-VTAC 239


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)

Query: 19  KSGKLL-FLGLDNAGKTTLLHML 40
           KSG+LL  +G   AGKTTLL+ L
Sbjct: 124 KSGELLAVMGSSGAGKTTLLNAL 146


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)

Query: 19  KSGKLL-FLGLDNAGKTTLLHML 40
           KSG+LL  +G   AGKTTLL+ L
Sbjct: 124 KSGELLAVMGSSGAGKTTLLNAL 146


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)

Query: 19  KSGKLL-FLGLDNAGKTTLLHML 40
           KSG+LL  +G   AGKTTLL+ L
Sbjct: 102 KSGELLAVMGSSGAGKTTLLNAL 124


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 138 SEDELRHFFNLYQQTTGKGKVSRSELPGRPLELFMCSVLKRQGY 181
           S D + H   +Y+       + R +L GR L  ++  +L  +GY
Sbjct: 156 SGDGVSHTVPIYEGYALPHAILRMDLAGRDLTDYLMKILTERGY 199


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 138 SEDELRHFFNLYQQTTGKGKVSRSELPGRPLELFMCSVLKRQGY 181
           S D + H   +Y+       + R +L GR L  ++  +L  +GY
Sbjct: 156 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 199


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 138 SEDELRHFFNLYQQTTGKGKVSRSELPGRPLELFMCSVLKRQGY 181
           S D + H   +Y+       + R +L GR L  ++  +L  +GY
Sbjct: 156 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 199


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 138 SEDELRHFFNLYQQTTGKGKVSRSELPGRPLELFMCSVLKRQGY 181
           S D + H   +Y+       + R +L GR L  ++  +L  +GY
Sbjct: 156 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 199


>AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha
          subunit AgOn protein.
          Length = 134

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 19 KSGKLLFLGLDNAGKTTLLHMLK 41
          K  KLL LG   +GK+T++  +K
Sbjct: 19 KDIKLLLLGAGESGKSTIVKQMK 41


>AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha
          subunit AgOa protein.
          Length = 134

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 19 KSGKLLFLGLDNAGKTTLLHMLK 41
          K  KLL LG   +GK+T++  +K
Sbjct: 19 KDIKLLLLGAGESGKSTIVKQMK 41


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)

Query: 12  GFLGLWKKSGKLLFL 26
           G  G+W+KSG  +FL
Sbjct: 910 GSFGVWEKSGSSVFL 924


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.141    0.440 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,009
Number of Sequences: 2123
Number of extensions: 8774
Number of successful extensions: 29
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 21
length of query: 193
length of database: 516,269
effective HSP length: 61
effective length of query: 132
effective length of database: 386,766
effective search space: 51053112
effective search space used: 51053112
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)