GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002503-TA|BGIBMGA002503-PA|IPR001214|SET,
IPR003616|Post-SET zinc-binding region
         (147 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    70   9e-15
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   5.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   5.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    20   9.3  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 70.1 bits (164), Expect = 9e-15
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 14/118 (11%)

Query: 17  QGLGLYAARDLEKHTMVIEYIGEIIRSELSEMREKKYESRNRGVYMFRLGERR------- 69
           +G G+   + ++K + V +Y+GE+I +E +E R K+Y++  R  Y+F L           
Sbjct: 506 RGWGVKTMKTIKKGSFVTQYVGEVITNEEAEKRGKEYDAAGR-TYLFDLDYNESEEQCPY 564

Query: 70  VIDATLCGGLARYINHSCQPNCVAETVEVDRCL-----RIIIFAKRRISRGEELTYDY 122
            +DA + G ++ +INHSC PN     V ++ CL     ++ +FA + I + EE+T+DY
Sbjct: 565 TVDAAIYGNISHFINHSCDPNLAVYGVWIN-CLDPNLPKLALFATKDIKQNEEITFDY 621



 Score = 25.0 bits (52), Expect = 0.33
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 131 HKIMCMCGAPNCRKWM 146
           +K +C C A NCR+++
Sbjct: 667 NKTLCKCDAQNCRRYL 682


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 113 SRGEELTYDYKFDIEDDAHKIMCM 136
           SR E      K ++ +DA++ +CM
Sbjct: 542 SRTETTGEPGKINVSEDAYRYLCM 565


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 113 SRGEELTYDYKFDIEDDAHKIMCM 136
           SR E      K ++ +DA++ +CM
Sbjct: 542 SRTETTGEPGKINVSEDAYRYLCM 565


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/29 (27%), Positives = 17/29 (58%)

Query: 32  MVIEYIGEIIRSELSEMREKKYESRNRGV 60
           M+ + IG+++  + SE+ + K +   R V
Sbjct: 250 MLADKIGKMVNQKFSELIQSKPQHARRKV 278


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.326    0.139    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,250
Number of Sequences: 429
Number of extensions: 1483
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 147
length of database: 140,377
effective HSP length: 52
effective length of query: 95
effective length of database: 118,069
effective search space: 11216555
effective search space used: 11216555
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 40 (20.2 bits)