GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002502-TA|BGIBMGA002502-PA|IPR013032|EGF-like region,
IPR001965|Zinc finger, PHD-type, IPR001951|Histone H4, IPR001841|Zinc
finger, RING-type, IPR003888|FY-rich, N-terminal, IPR011011|Zinc
finger, FYVE/PHD-type, IPR011009|Protein kinase-like
         (4269 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    40   0.002
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    38   0.007
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    37   0.013
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           35   0.052
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              33   0.16 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    32   0.37 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    31   0.49 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    30   1.1  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    29   2.6  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          29   2.6  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    29   3.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   4.5  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   7.9  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    27   7.9  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    27   7.9  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 712 LCVMCGAVGTDSEGCLIACAQCGQTYHPYCVNIK---VSQVI--VTLGWRCLDCT 761
           +C  C A   ++ GC+I+CA C  T+H  C  +    +  V+  V L W C+ CT
Sbjct: 15  ICFSC-AEPLEATGCIISCAYCDATFHRGCCKLPPELIDAVLSNVDLHWSCIGCT 68



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 833 ASLVMCCVCSEPYSDGELIIQCEACTRWLHASCDSIRSE-NDAEIC-CRAGYKCVGC 887
           A   +C  C+EP      II C  C    H  C  +  E  DA +      + C+GC
Sbjct: 11  AMAAICFSCAEPLEATGCIISCAYCDATFHRGCCKLPPELIDAVLSNVDLHWSCIGC 67



 Score = 29.9 bits (64), Expect = 1.5
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 420 VCQVCREPAPGEARAVCCDHCDKLYHAACLR 450
           +C  C EP       + C +CD  +H  C +
Sbjct: 15  ICFSCAEPLEATGCIISCAYCDATFHRGCCK 45


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 37.5 bits (83), Expect = 0.007
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 14/77 (18%)

Query: 356 FCKDHLYQVPLVCTSEI-------DCRTCRTIGDIANLMTCV-VCGAHYHGTCVGLAQLP 407
           FC+D ++     C S +        C TC    D AN ++C  VCG+ +H  C GL++  
Sbjct: 12  FCRDIVWLRSCSCHSSVCAVSFVMQCSTCNAPTDSANSVSCAGVCGSKHHTHCTGLSRDS 71

Query: 408 GVRSG------WACRGC 418
               G      W C+ C
Sbjct: 72  TRELGRNNQLLWLCKNC 88


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
            protein.
          Length = 680

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 6/139 (4%)

Query: 3928 ETNLSKDRDDFDTASTESMETDDL---DMKPDIKDEKMDLSFMDSLDNDELMKEVGDDVS 3984
            E  + K  +D++    E  E D+    D + D +DE  +L+      +D +  E GD   
Sbjct: 468  EEEIYKGEEDYEGEEDEEDEEDEYEGDDTEEDEEDEDDELAAGPLGTSDVVTVEDGDGQY 527

Query: 3985 ALDEDLKRVEQDEKSNQSTEKEKYRGI-RYKAWSPGCIGPPVKYKRPTDRELTELVFRTG 4043
             + E ++  ++D K+    +  K RG  + KA SP  +  P    R   R  T     T 
Sbjct: 528  VVLEVIQLQDKDSKAAGMEKSRKKRGAPKRKATSPPAVATPPSTSRA--RTATRTATTTT 585

Query: 4044 VAIMPVTNEDSRKCELCGI 4062
             A+     E +   ++ GI
Sbjct: 586  RALRSAKKEPAESLDMDGI 604


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 34.7 bits (76), Expect = 0.052
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 2948 NTNSAKTDNQPGLRKNSDATTPTQVNFENLLPSSKVEVAPPRPSPIQRMEKPATSMPSPD 3007
            N +S+  D+QP   +++      +   E   PS+    A   P+P+Q    PAT+ P+P 
Sbjct: 896  NGSSSGRDSQPSSARSTPKKQNLKFIDEASTPSTSAMAATIVPNPVQASPSPATA-PAPA 954

Query: 3008 NMPMSAAQMVGSRVNTLSTI-GQMRKSPTVS 3037
                S     G    T  T+ G M ++PTV+
Sbjct: 955  K-TTSTDSTNGLETPTSETVGGGMHRTPTVA 984


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 33.1 bits (72), Expect = 0.16
 Identities = 19/83 (22%), Positives = 37/83 (44%)

Query: 1956 EQQRYYELEVQKLRKIRKSLNSKQRQLRKSGNELLPNDAAELQRVSAEQQALQKHLDAAR 2015
            +QQR  +   Q  R+ ++    +Q+Q ++   EL        Q    +QQ+ Q      +
Sbjct: 276  QQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQ 335

Query: 2016 KQARQHSMLIQEYENKQRQQNPQ 2038
                Q   + Q+ + +Q+Q+ PQ
Sbjct: 336  TGRYQPPQMRQQLQQQQQQRQPQ 358



 Score = 31.1 bits (67), Expect = 0.65
 Identities = 17/83 (20%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 1956 EQQRYYELEVQKLRKIRKSLNSKQRQLRKSGNELLPNDAAELQRVSAEQQALQKHLDAAR 2015
            +QQ+ ++   Q+ ++ ++    +Q+Q ++  N+    +  + Q+    QQ  Q+     +
Sbjct: 224  QQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQ--QREWQQQQQQQQHQQREQQQQQRVQ 281

Query: 2016 KQARQHSMLIQEYENKQRQQNPQ 2038
            +Q +QH    Q+ + +++QQ  Q
Sbjct: 282  QQNQQHQRQQQQQQQQRQQQQQQ 304



 Score = 30.7 bits (66), Expect = 0.85
 Identities = 24/112 (21%), Positives = 53/112 (47%), Gaps = 5/112 (4%)

Query: 1930 RSHSEADLHARRLYEQWLKQFNVFAVEQQRYYELEVQKLRKIRKSL--NSKQRQLRKSGN 1987
            R   +   H R+  +Q  ++      EQQ  +   V++ +  ++    N  Q+Q +++G 
Sbjct: 279  RVQQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQTGR 338

Query: 1988 ELLPNDAAELQRVSAEQQALQKHLDAARKQARQHSMLIQEYENKQRQQNPQL 2039
               P    +LQ+   ++Q  Q+++ A   Q +Q     Q+ + K+++  P+L
Sbjct: 339  YQPPQMRQQLQQQQQQRQP-QRYVVAGSSQQQQQQH--QQQQQKRKRPKPEL 387



 Score = 29.1 bits (62), Expect = 2.6
 Identities = 24/115 (20%), Positives = 55/115 (47%), Gaps = 9/115 (7%)

Query: 1924 PPAPSDRSHSEADLHARRLYEQWLKQFNVFAVEQQRYYELEVQKLRKIRKSLNSKQRQLR 1983
            P   +  +HS  +   R+  +Q  ++      +QQ+ ++   Q+ ++ ++    +Q+Q +
Sbjct: 198  PMMTAQGAHSSRNRRGRQGPQQQEQR------QQQQQHQQREQQQQQQQQQQQQQQQQQQ 251

Query: 1984 KSGNELLPNDAAELQRVSAEQQALQKHLDAARKQARQHSMLIQEYENKQRQQNPQ 2038
            +  N+    +  + Q+    QQ  Q+     ++Q +QH    Q+ + +QRQQ  Q
Sbjct: 252  QQRNQ--QREWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQ-QQQQQQQRQQQQQ 303



 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/83 (18%), Positives = 40/83 (48%)

Query: 1956 EQQRYYELEVQKLRKIRKSLNSKQRQLRKSGNELLPNDAAELQRVSAEQQALQKHLDAAR 2015
            +QQ++ + E Q+ ++ ++    +Q+Q ++   +       + Q+    +Q  Q+ +    
Sbjct: 225  QQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQN 284

Query: 2016 KQARQHSMLIQEYENKQRQQNPQ 2038
            +Q ++     Q+   +Q+QQ  Q
Sbjct: 285  QQHQRQQQQQQQQRQQQQQQEQQ 307


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
            protein.
          Length = 724

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 17/81 (20%), Positives = 39/81 (48%)

Query: 1958 QRYYELEVQKLRKIRKSLNSKQRQLRKSGNELLPNDAAELQRVSAEQQALQKHLDAARKQ 2017
            +RY   ++++ R+ ++    +Q+Q ++   +       + QR   +QQ  Q+     R+Q
Sbjct: 295  ERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQ 354

Query: 2018 ARQHSMLIQEYENKQRQQNPQ 2038
             +Q     Q+ + + +QQ  Q
Sbjct: 355  QQQQQQQHQQQQQQWQQQQQQ 375



 Score = 31.1 bits (67), Expect = 0.65
 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 1966 QKLRKIRKSLNSKQRQLRKSGNELLPNDAAELQRVSAEQQALQKHLDAARKQARQHSMLI 2025
            Q+ ++ R+    +Q+Q ++ G   +P    + QR   + Q  Q+     R+Q ++     
Sbjct: 274  QQQQRPRQQQQQQQQQQQQQGERYVPPQLRQ-QRQQQQHQQQQQQQQQQRQQQQRQQQRQ 332

Query: 2026 QEYENKQRQQNPQ 2038
            Q+   +Q+QQ  Q
Sbjct: 333  QQQRQQQQQQQQQ 345



 Score = 31.1 bits (67), Expect = 0.65
 Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 1955 VEQQRYYELEVQKLRKIRKSLNSKQRQLRKSGNELLPNDAAELQRVSAEQQALQKHLDAA 2014
            + QQR  +   Q+ ++ ++    +QRQ ++   +       + Q+   +QQ  Q+     
Sbjct: 302  LRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQ------RQQQQQQQQQQRQQQQRQQQ 355

Query: 2015 RKQARQHSMLIQEYENKQRQQ 2035
            ++Q +QH    Q+++ +Q+QQ
Sbjct: 356  QQQQQQHQQQQQQWQQQQQQQ 376



 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/83 (20%), Positives = 40/83 (48%)

Query: 1956 EQQRYYELEVQKLRKIRKSLNSKQRQLRKSGNELLPNDAAELQRVSAEQQALQKHLDAAR 2015
            +QQR  +   Q+ ++ ++    +QRQ ++   +       + Q+   +QQ  ++ L   +
Sbjct: 328  QQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSLPHRK 387

Query: 2016 KQARQHSMLIQEYENKQRQQNPQ 2038
            +   Q S  +Q+ + +Q+Q   Q
Sbjct: 388  QTQLQLSPRLQQQQQQQQQSQQQ 410



 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 5/37 (13%)

Query: 710 QDLCVMCGAVGTDSEGCLI--ACAQCGQTY---HPYC 741
           Q++C+ CG VG  ++ C     C +CG  +   HP C
Sbjct: 682 QNMCIRCGVVGHMAKVCTSQPKCLKCGGPHTIGHPDC 718


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 31.5 bits (68), Expect = 0.49
 Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 1929 DRSHSEADLHARRLYEQW-LKQFNVFAVEQQRYYELEVQKLRKIRKSLNSKQRQLRKSGN 1987
            +R   E +  A RL E+   ++    A+E+++  EL  Q+ R+ R+    ++ Q  K   
Sbjct: 439  ERMKLEEEHRAARLREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEER 498

Query: 1988 ELLPNDAAELQRVSAEQQALQKHLDAARKQARQ 2020
            E    +  + +R   EQ+  ++  +AAR++ R+
Sbjct: 499  ERQQREKEQRER---EQREKEREREAARERERE 528


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 710 QDLCVMCGAVGTDSEGCL--IACAQCGQTYH 738
           Q+LC+ CG  G  +  C     CA CG  +H
Sbjct: 528 QNLCIRCGLTGHKARSCQNEAKCALCGGAHH 558


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 741 CVNIKVSQVIVTLGWRCLDCTVCEGCGNR 769
           C+++ V Q  V +G  C DCTV     NR
Sbjct: 4   CISVHVGQAGVQIGNPCWDCTVWSMASNR 32


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 3881 GEIL--CDSDSELYFCSTQCYERFAWRPTNI 3909
            GE+   C SDS ++  S  C +R+ W P  +
Sbjct: 382  GEVFAECLSDSSIFVQSPNCNQRYGWHPATV 412


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)

Query: 710 QDLCVMCGAVGTDSEGC--LIACAQCG 734
           Q LC+ CG+ G  +  C   + CA CG
Sbjct: 497 QQLCIRCGSEGHKARDCSSYVKCAACG 523


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 79/375 (21%), Positives = 119/375 (31%), Gaps = 24/375 (6%)

Query: 2964 SDATTPTQVNFENLLPSSKVEVAPPRPSPIQRMEKPATSMPSPDNMPMSAAQMVGSRVNT 3023
            S    PT +   NL   S V     RP P      PA   P P   P+  + +V +    
Sbjct: 49   STKPVPTVLGGPNLFAPSAVSSQLQRPQPTVLAASPA---PQPSLAPVVPSSVVTAPPAR 105

Query: 3024 LSTIGQMRKSPTVSPINSPVGGIQNTLMKSPAQSPLI-SNQTFTSVEDNSPGSVPSQVIQ 3082
             S     R +P   P  + V  + +  +K+P   PL+   Q      D  P   P+ +  
Sbjct: 106  PSQPPTTRFAP--EP-RAEVKFVPSVPLKTPPVRPLLPQQQQHPHQRDTGPALFPAPISH 162

Query: 3083 MPALSKIQNNPXXXXXXXXXXXXXXXXXXXYPKNQPLPTSILGHTLLQPTRQINANNLPF 3142
             P     Q  P                    P     P      T  QP R       P 
Sbjct: 163  RPPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPP 222

Query: 3143 N-PQSISSSQPPALVMTSRPLIGNKEPPPNVTVRTHNMVTPGMGQMQAKQSQGSLNFITS 3201
              P  +    PP  V   +P  G +  PP+          P MGQ    +    +     
Sbjct: 223  GVPMPMRPQMPPGAVPGMQP--GMQPRPPSAQGMQR---PPMMGQPPPIRPPNPMGGPRP 277

Query: 3202 SKLLHTQLTSPLKRSKSTDEPKSEVIVGHIQPTKRHSVEAVVVKSEPMETEDSTNTSSGN 3261
                     S    S     P+  + +    P            + PM    ++   SGN
Sbjct: 278  QISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPMGDPQTSRPPSGN 337

Query: 3262 DISGKNSQHSNANNQRNDESQNVLLKQLLQITTTASNV-----VPQRTVTIQRTAPALGT 3316
            D  G     S+A    +D+ ++V++ +L    ++A N       P R  T+    P +G 
Sbjct: 338  DNMGGGPPPSSATPSVDDD-EDVVIGRLPADNSSALNSPNPARAPPRNFTMPGPGPGIG- 395

Query: 3317 IPSLEAQLARPSIPP 3331
                E + + PS PP
Sbjct: 396  ----EREKSNPSRPP 406


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 1989 LLPNDAAELQRVSAEQQALQKHLDAARKQARQHSMLIQEYEN-KQR 2033
            +L    AEL+ +SAE   ++K      +   QH ML  E  N KQR
Sbjct: 685  MLQEKEAELRDISAEVSKIEKTAHRFGQLKEQHDMLNYELNNLKQR 730


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin binding
            protein protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 3302 QRTVTIQRTAPALGTIPSLEAQLARPSIPPPTIALSQEVELPKNSPRQMTTVSS 3355
            +R + I+  A  +G +P+ +   + PS+P P I  S    + ++ P+ +T  SS
Sbjct: 27   RRALNIRTGANNIGVLPASKMPTSYPSLPAP-IVPSPGAPIQQSRPQAVTVRSS 79


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 3135 INANNLPFNPQSISSSQPPALVMTSRPLIGNKEPPPNVTVRTH 3177
            +  +N PF P +  +  PP L  T+ P+      P N+ V  +
Sbjct: 788  LQPSNAPFTPPTDRTPTPPPLPATAEPMGDYMIQPSNIPVHPY 830


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.130    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,803,267
Number of Sequences: 2123
Number of extensions: 152284
Number of successful extensions: 436
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 327
Number of HSP's gapped (non-prelim): 87
length of query: 4269
length of database: 516,269
effective HSP length: 79
effective length of query: 4190
effective length of database: 348,552
effective search space: 1460432880
effective search space used: 1460432880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)