GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002501-TA|BGIBMGA002501-PA|IPR001763|Rhodanese-like
         (139 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   1.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   1.8  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   7.2  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 18  RLYSESKVETKVADYDEVVKAISNNNILLIDVREPDEV 55
           R Y E KV  ++  + + V A    N   I V E DEV
Sbjct: 237 RYYLEKKVTRRLHRFTKSVIAERQENFKEIVVPETDEV 274


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 14/38 (36%), Positives = 18/38 (47%)

Query: 18  RLYSESKVETKVADYDEVVKAISNNNILLIDVREPDEV 55
           R Y E KV  ++  + + V A    N   I V E DEV
Sbjct: 237 RYYLEKKVTRRLHRFTKSVIAERQENFKEIVVPETDEV 274


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)

Query: 57  DHGHIPNSINIPLGT 71
           D G  P+ IN+ LGT
Sbjct: 249 DEGAPPSKINLGLGT 263


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.129    0.368 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,037
Number of Sequences: 317
Number of extensions: 1314
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 139
length of database: 114,650
effective HSP length: 51
effective length of query: 88
effective length of database: 98,483
effective search space:  8666504
effective search space used:  8666504
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.5 bits)
S2: 39 (19.8 bits)