Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002501-TA|BGIBMGA002501-PA|IPR001763|Rhodanese-like
(139 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1058 - 25735902-25736000,25736085-25736152,25736575-257366... 35 0.027
12_02_0109 + 13701488-13701787,13701928-13701981,13702065-13702133 34 0.036
02_01_0497 + 3607227-3607462,3607600-3607661,3608138-3608286,360... 34 0.048
02_01_0431 + 3141995-3142058,3142178-3142241,3142376-3142465,314... 32 0.19
07_03_1741 + 29156076-29156316,29156554-29156676,29156784-291568... 31 0.26
06_03_1459 - 30307859-30307933,30308025-30308078,30308165-303082... 31 0.26
06_01_0735 + 5431900-5432044,5432137-5432271,5432710-5432750,543... 30 0.78
02_01_0019 + 124871-124893,125030-125128,125379-125456,125850-12... 30 0.78
06_03_0151 + 17270688-17270698,17271149-17271281,17271548-172715... 29 1.0
03_06_0772 - 36162537-36162745,36163131-36163171,36163316-361636... 29 1.4
05_03_0510 + 14864430-14864792,14865234-14865485,14865573-148656... 29 1.8
01_06_0082 + 26279699-26279996,26280100-26280315,26280438-262808... 28 2.4
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342... 28 3.2
09_04_0018 - 13826587-13827695,13827907-13827966,13828332-138283... 27 4.2
02_04_0465 - 23146332-23146367,23146786-23146858,23147200-231472... 27 4.2
11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885,557... 26 9.6
06_03_1225 + 28538515-28538721,28538799-28539000,28539241-285394... 26 9.6
03_02_0601 - 9754281-9754340,9754978-9755061,9755384-9755585,975... 26 9.6
>12_02_1058 -
25735902-25736000,25736085-25736152,25736575-25736638,
25736838-25736919,25737503-25737561,25737664-25737723,
25737884-25738046,25738236-25738360,25738827-25738859,
25739098-25739160,25739364-25739423,25739972-25740196,
25740272-25740433
Length = 420
Score = 34.7 bits (76), Expect = 0.027
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Query: 49 VREPDEVKDHGHIPNSINIPLGTISTVLGEM-SDKEFNKTYKRPKPNQNTELIFYCMAGR 107
V EP + GH+P S +P + ++ +E K +++ + + L+ C G
Sbjct: 322 VPEPRKGIRSGHVPGSKCVPFPQLLDSSQKLLPPEELRKRFEQEGISLDQPLVSSCGTGV 381
Query: 108 RSAKAQESAINLGFKNTKNYQGSWTEWAS 136
+ LG + Y GSWTEW +
Sbjct: 382 TACILALGLHRLGKTDVPVYDGSWTEWGA 410
>12_02_0109 + 13701488-13701787,13701928-13701981,13702065-13702133
Length = 140
Score = 34.3 bits (75), Expect = 0.036
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 22 ESKVETKVADYDEVVKAISNNNILLIDVREPDEVKDHGHIPNSINIPLGTISTVLGEMSD 81
E++ + D +E +S+ +DVR ++ D GH+ + N+P T + +
Sbjct: 23 ETERVMRSVDAEEACALLSSGRHQYLDVRMWEDF-DKGHVAGARNVPYYLSVTPRAKEKN 81
Query: 82 KEFNKTYKRPKPNQNTELIFYCMAGRRSAKAQESAINLGFKNTKNYQGSW 131
F + + + +I C +G RS A + GFKN + +G +
Sbjct: 82 PHFVQQVAALY-HAHDHIIVGCRSGVRSKLATADLVAAGFKNVRILEGGY 130
>02_01_0497 +
3607227-3607462,3607600-3607661,3608138-3608286,
3608418-3608538,3608638-3608793,3609041-3609086,
3609414-3609480,3609553-3609629,3610180-3610249,
3610956-3611014,3611105-3611213,3611552-3611611,
3611701-3611763,3612007-3612131,3612260-3612422,
3612506-3612565,3612802-3612860,3613057-3613138,
3613227-3613290,3613506-3613573,3613648-3613758
Length = 668
Score = 33.9 bits (74), Expect = 0.048
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 51 EPDEVKDHGHIPNSINIP-LGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFYCMAGRRS 109
EP E GHIP + +P L + E K +++ + + ++ C +G +
Sbjct: 568 EPREGVRSGHIPGTKCVPFLEMFDDAPMLLPADEIRKKFEQAGISLDRPIVVTCGSGVTA 627
Query: 110 AKAQESAINLGFKNTKNYQGSWTEW 134
+G ++ Y GSWTEW
Sbjct: 628 CILALGLYRIGKQDIPVYDGSWTEW 652
>02_01_0431 +
3141995-3142058,3142178-3142241,3142376-3142465,
3142669-3142745,3142898-3142968,3143581-3143634,
3143731-3143817
Length = 168
Score = 31.9 bits (69), Expect = 0.19
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 29 VADYDEVVKAISNNNILLIDVREPDEVKDHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 88
+ D EV + +S+ + L DVR + D H + NI T G+ + F
Sbjct: 53 IVDAGEVRELMSSGHHYL-DVRLGKDF-DKAHADGARNISYYLSVTPSGKEKNPHFVDEV 110
Query: 89 KRPKPNQNTELIFYCMAGRRSAKAQESAINLGFKNTKNYQGSW 131
++ LI C G RS A + ++ GFKN +N +G +
Sbjct: 111 ASLF-GKDEHLIVACNTGVRSRLATKDLLDAGFKNVRNLKGGY 152
>07_03_1741 +
29156076-29156316,29156554-29156676,29156784-29156875,
29157577-29157677,29157752-29157862,29158254-29158362,
29158589-29158639,29158758-29158838
Length = 302
Score = 31.5 bits (68), Expect = 0.26
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 46 LIDVREPDEVKDHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFYCMA 105
LIDVREPDEV D + +PL T G + EF+ P ++T ++ C
Sbjct: 214 LIDVREPDEV-DKASLEGFKVLPLRQFGT-WGPVMTDEFD-------PQKDTYVL--CHH 262
Query: 106 GRRSAKAQESAINLGFKNTKNYQGSWTEWASK 137
G RS + + + GF+ N G +A K
Sbjct: 263 GMRSMQVAKWLQSQGFRKVYNVAGGIHAYAVK 294
>06_03_1459 -
30307859-30307933,30308025-30308078,30308165-30308235,
30309081-30309154,30309409-30309519,30309548-30309574,
30309612-30309695,30309764-30309807
Length = 179
Score = 31.5 bits (68), Expect = 0.26
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 47 IDVREPDEVKDHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFYCMAG 106
+DVR E GH ++NIP T G + F + ++ E+I C +G
Sbjct: 86 LDVRTEGEFAG-GHPVGAVNIPY-MYKTGSGLTKNTHFLEKVSTTFGKED-EIIVGCQSG 142
Query: 107 RRSAKAQESAINLGFKNTKNYQGSWTEW 134
+RS A + GF + G ++ W
Sbjct: 143 KRSLMAASELCSAGFTAVTDIAGGFSAW 170
>06_01_0735 +
5431900-5432044,5432137-5432271,5432710-5432750,
5433463-5433579,5433779-5433898,5433982-5434076,
5434149-5434242,5434592-5434723,5435191-5435303,
5435443-5435566,5435884-5436000,5436083-5436177,
5436269-5436362,5436655-5436780,5436854-5436966,
5437067-5437256,5437395-5437508,5437551-5437598
Length = 670
Score = 29.9 bits (64), Expect = 0.78
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 23 SKVETKVADYDEVVKAISNNNILLIDVREPDEVKDHGHIPNSINIPLGTISTVLGEMSDK 82
+++ T + YDE ++ N L +D+ D +HG+ I +P T + G++S
Sbjct: 435 ARLLTGCSSYDEFLELSQRGNNLAVDLTVGDIYGEHGY--PKIGLPASTTAASFGKVSSS 492
Query: 83 EFNKTYK 89
++ YK
Sbjct: 493 RLSE-YK 498
>02_01_0019 +
124871-124893,125030-125128,125379-125456,
125850-125920,126816-126940
Length = 131
Score = 29.9 bits (64), Expect = 0.78
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 21 SESKVETKVADYDEVVKAISNNNILLIDVREPDEVKDHGHIPNSINIP 68
SES V D I++ +DVR +E+ + GH+ NS+N+P
Sbjct: 12 SESPVPVVTVDVAAASDLITSAGHRYVDVRTEEEM-NKGHLHNSLNVP 58
>06_03_0151 + 17270688-17270698,17271149-17271281,17271548-17271589,
17271706-17271815,17271957-17272035,17272114-17272287,
17272386-17272466,17272761-17272988,17273067-17273402,
17273501-17273586,17273642-17273783,17274596-17274687,
17274770-17274904,17275142-17275304,17275393-17275482,
17275568-17275753,17276109-17276141,17276700-17276762,
17276839-17276901,17276983-17277042,17277258-17277410,
17277530-17277613,17278434-17278610,17278685-17278791,
17278858-17279071,17279158-17279261,17279926-17280061,
17280191-17280316,17280682-17280792,17280968-17281066,
17281367-17281633,17281707-17281822,17281853-17282084,
17282597-17282664,17282682-17282807,17282980-17283040
Length = 1495
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 7 KAIPQLNALSLRLYSESKVETKVADYDEVVKAISNNNILLIDVREPDEVKDHGHIPNSIN 66
+A+P ++ + + + + + ++ E + + N+ + + P V +P S+
Sbjct: 1067 QAVPSVSLVKKKFLGKYAISAE--EFSEEMVGAKSRNVAYLKGKVPSWVG----VPTSVA 1120
Query: 67 IPLGTISTVLGEMSDKEFNKTYKRPK 92
IP GT VL + +KE +T + K
Sbjct: 1121 IPFGTFEKVLSDEINKEVAQTIQMLK 1146
>03_06_0772 -
36162537-36162745,36163131-36163171,36163316-36163600,
36163710-36163813,36163924-36164021,36165039-36165213,
36166429-36166578,36167113-36167193,36167246-36167299,
36167422-36167679
Length = 484
Score = 29.1 bits (62), Expect = 1.4
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 4/93 (4%)
Query: 40 SNNNILLIDVREPDEVKDHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPK---PNQN 96
S +LL+DVR D D GH + + + +S+ E P +N
Sbjct: 228 SGRRLLLLDVRN-DYEWDIGHFQGAQRPNVDCFRSTSFGLSESEQEMDSSDPLNGIDKEN 286
Query: 97 TELIFYCMAGRRSAKAQESAINLGFKNTKNYQG 129
T+++ YC G R GF+N +G
Sbjct: 287 TDILMYCTGGIRCDVYSTILRKKGFRNLYTLKG 319
>05_03_0510 +
14864430-14864792,14865234-14865485,14865573-14865671,
14865789-14866082,14866630-14867010
Length = 462
Score = 28.7 bits (61), Expect = 1.8
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 92 KPNQNTELIFYCMAGRRSAKAQESAINLGFKNTKNYQG 129
KP + + YC G R KA ++ GFK + +G
Sbjct: 305 KPKELPRVAMYCTGGIRCEKASSFLLSKGFKEVYHLEG 342
>01_06_0082 +
26279699-26279996,26280100-26280315,26280438-26280863,
26280966-26281168
Length = 380
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 69 LGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFYCMAGRRSAKAQESAINLGFK 122
LG V+GE+ ++N + +P + + GR A QE INLG K
Sbjct: 178 LGESLIVMGEIGGNDYNFWFTARQPRETARQYLPDVIGRIGAAVQE-VINLGAK 230
>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
26834330-26834732,26834840-26835118,26835285-26835716,
26836362-26836838,26837171-26837212,26837285-26837545,
26837637-26838938,26839146-26839575,26839643-26840046,
26840360-26840716,26840842-26841102,26841494-26842141,
26842231-26842452,26842547-26842768,26842860-26843009,
26843739-26844111,26844467-26844689,26845167-26845425,
26845585-26845920,26846013-26846999,26848395-26849624,
26849706-26849768,26849858-26849910,26849998-26850079,
26850520-26850588,26851070-26851129,26851205-26851267,
26851993-26852101,26852742-26852827,26853120-26853847,
26854613-26854676
Length = 3716
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 11 QLN-ALSLRLYSESKVETKVADYDEVVKAISNNNI 44
QLN A+S ++ E+ VE ++ Y+E+ K I N+NI
Sbjct: 3462 QLNQAISGQVSPEAVVELRLQAYNEITKNIVNDNI 3496
>09_04_0018 -
13826587-13827695,13827907-13827966,13828332-13828368,
13830281-13830341,13831295-13831443
Length = 471
Score = 27.5 bits (58), Expect = 4.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 35 VVKAISNNNILLIDVREPDEVKDHGHIPNS 64
V A++ + ++D+ +++D GHI NS
Sbjct: 409 VESAVNGTRVKILDITAVSQLRDEGHISNS 438
>02_04_0465 -
23146332-23146367,23146786-23146858,23147200-23147267,
23147588-23147675,23147845-23147932,23148439-23148535,
23148645-23148752,23148916-23149032,23149132-23149260
Length = 267
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 92 KPNQNTELIFYCMAGRRSAKAQESAINLGFKNTKNYQG 129
K +++T++I C G RS A E GF+N QG
Sbjct: 164 KFSKDTDIIVVCQKGLRSLAACEQLYGAGFQNLFWVQG 201
>11_01_0682 -
5575297-5575308,5575391-5575516,5575779-5575885,
5575911-5576013,5576122-5576187,5576378-5576461,
5577448-5577522,5577615-5577668,5577752-5577895,
5578632-5578685,5578877-5578981,5579076-5579173,
5579660-5579729,5580444-5580566,5580647-5580727,
5580996-5581476,5581684-5581816,5582550-5582598,
5582704-5582892,5583642-5583703,5583762-5585316
Length = 1256
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 36 VKAISNNNILLIDVREPDEVKDHGHIPNSINIPLGTISTVLGE 78
+ A+ N+ +D EP KDH +P++I I + + GE
Sbjct: 788 LSAVPGVNMDDVDDNEPTRKKDHRRVPSTIAIEEVKAAALKGE 830
>06_03_1225 +
28538515-28538721,28538799-28539000,28539241-28539472,
28539560-28539713,28539792-28540136
Length = 379
Score = 26.2 bits (55), Expect = 9.6
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 5 EYKAIPQLNALSLRLYSESKVETKVADYDEVVKAISNNNILLIDVREPDEVKDHG 59
EY++ + + L + T+ +V + +++ +ILL D ++P E+ D G
Sbjct: 286 EYESPVIMRCTQVALLCAQEDPTERPTMTDVTRVLNSQSILLSDPKKPTELTDGG 340
>03_02_0601 -
9754281-9754340,9754978-9755061,9755384-9755585,
9755663-9755730,9755999-9756094,9756307-9756508,
9756590-9756661,9756786-9756826,9757016-9757089,
9757991-9758026,9758486-9758720
Length = 389
Score = 26.2 bits (55), Expect = 9.6
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 3 VPEYKAIPQLNALSLRLYSESKVETKVADYDEVVKAISNNNILLIDVREPDEVK-DHG 59
VPE+K +L+ L S ++V + Y E+V N+ I+ + EP V D+G
Sbjct: 94 VPEHKRAQELSELLGVNISPAQVVHGSSPYKELVNRFENDLIIAVGKGEPAAVMVDYG 151
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,868,548
Number of Sequences: 37544
Number of extensions: 141292
Number of successful extensions: 228
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 215
Number of HSP's gapped (non-prelim): 20
length of query: 139
length of database: 14,793,348
effective HSP length: 75
effective length of query: 64
effective length of database: 11,977,548
effective search space: 766563072
effective search space used: 766563072
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
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