Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002501-TA|BGIBMGA002501-PA|IPR001763|Rhodanese-like
(139 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81592-13|CAB76412.2| 421|Caenorhabditis elegans Hypothetical p... 42 1e-04
Z78016-9|CAB76723.2| 421|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical ... 28 2.8
AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical ... 28 2.8
U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical pr... 27 3.7
AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical ... 27 4.9
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr... 27 6.5
U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical pr... 27 6.5
AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical ... 27 6.5
Z68216-2|CAA92460.2| 367|Caenorhabditis elegans Hypothetical pr... 26 8.6
>Z81592-13|CAB76412.2| 421|Caenorhabditis elegans Hypothetical
protein R186.6 protein.
Length = 421
Score = 42.3 bits (95), Expect = 1e-04
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 26 ETKVADYDEVVKAISNNNILLIDVREPDEVKD------HGHIPNSINIPLGTI-STVLGE 78
++ + YD+V+ +N ++D + DE +GHI + NIP+ + +G+
Sbjct: 289 DSVIITYDDVLLNSEIDNFDVVDAQTKDEFLGTAQGALYGHIKGARNIPVDAVYDWAVGQ 348
Query: 79 MSDKEFNK-TYKRPKPNQNTELIFYCMAGRRSAKAQESAINLGFKNTKNYQGSWTEW 134
D + K + + +I YC RSA + G+ N K Y G W EW
Sbjct: 349 WKDADHLKGLFNNNALSLRKPVIIYCSTSLRSAMVWWALTRSGY-NGKIYFGGWPEW 404
>Z78016-9|CAB76723.2| 421|Caenorhabditis elegans Hypothetical
protein R186.6 protein.
Length = 421
Score = 42.3 bits (95), Expect = 1e-04
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 26 ETKVADYDEVVKAISNNNILLIDVREPDEVKD------HGHIPNSINIPLGTI-STVLGE 78
++ + YD+V+ +N ++D + DE +GHI + NIP+ + +G+
Sbjct: 289 DSVIITYDDVLLNSEIDNFDVVDAQTKDEFLGTAQGALYGHIKGARNIPVDAVYDWAVGQ 348
Query: 79 MSDKEFNK-TYKRPKPNQNTELIFYCMAGRRSAKAQESAINLGFKNTKNYQGSWTEW 134
D + K + + +I YC RSA + G+ N K Y G W EW
Sbjct: 349 WKDADHLKGLFNNNALSLRKPVIIYCSTSLRSAMVWWALTRSGY-NGKIYFGGWPEW 404
>AF039718-3|AAB96744.1| 329|Caenorhabditis elegans Hypothetical
protein T12F5.2 protein.
Length = 329
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 33 DEVVKAISNNNILLIDV----REPDEVKDHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 88
++ VK + ++N ID+ +E ++K+H IP + IP T ++ E KE +K Y
Sbjct: 206 EQTVKRLEDDNEK-IDIAHCLQEFVDLKEHLKIPEMVQIPQDTDLPIIDETLQKEESKKY 264
>AC199170-6|ABO33264.1| 325|Caenorhabditis elegans Hypothetical
protein T08D2.5 protein.
Length = 325
Score = 27.9 bits (59), Expect = 2.8
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 33 DEVVKAISNNNILLIDV----REPDEVKDHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 88
++ VK + ++N ID+ +E ++K+H IP + IP T ++ E KE +K Y
Sbjct: 156 EQTVKRLEDDNEK-IDIAHCLQEFVDLKEHLKIPEMVQIPQDTDLPIIDETLQKEESKKY 214
>U41034-8|AAA82382.1| 669|Caenorhabditis elegans Hypothetical
protein M02D8.5 protein.
Length = 669
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 15 LSLRLYSESKVETKVADYDEVVKAISNNNILLIDVREPDEVKDHG 59
LS Y + K +T ++ + +K S N LL+D PD D+G
Sbjct: 589 LSWSSYDDIKQKTSYSNAKKSLKYASCGNKLLVDYTSPDGGPDNG 633
>AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical
protein T12B3.3 protein.
Length = 356
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 28 KVADYDEVVK-AISNNNILLIDVREPD 53
+V D ++VVK A+ NN +L DV++ D
Sbjct: 159 RVPDMEDVVKWAVENNTRMLFDVKDSD 185
>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical protein
ZC53.4 protein.
Length = 1410
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 19 LYSESKVETKVADYDEVVKAISNNNILLIDVREPDEV----KDHGHIPNSINIPLGTIST 74
L E++V++ + DY +K + I +D+ P E+ D P ++ I I
Sbjct: 1238 LNGEAEVKSDLKDYINYLKKLDRGCIFEVDLEYPKEIHSRHNDSPLCPENVKIDNHVIKK 1297
Query: 75 VLGEMSDKE 83
+ + D+E
Sbjct: 1298 LCNTLFDRE 1306
>U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical
protein R08E3.4a protein.
Length = 447
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 10 PQLNALSLRLYSESKVET-KVADYDEVVKAISNNNILL 46
P N SL L + K T + D + VV I+NNN+LL
Sbjct: 394 PPANESSLSLTEKEKSPTPEKEDEENVVCVIANNNLLL 431
>AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical
protein Y71F9AL.9 protein.
Length = 314
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Query: 21 SESKV-ETKVADYDEVVKAISNNNILLI 47
SE K+ + K+A EVV +++NN+I+++
Sbjct: 6 SEKKIMQEKIAKVREVVDSVTNNDIIMV 33
>Z68216-2|CAA92460.2| 367|Caenorhabditis elegans Hypothetical
protein F27C8.2 protein.
Length = 367
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 34 EVVKAISNNNILLIDVREPDEVKDH-GHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPK 92
++V A N + + E+++ GHIP+ + PL ST + E+ ++ K + P+
Sbjct: 245 QIVAAFDENTGSCVGISILREIQNEDGHIPDLLIAPLHAKSTAIAEILLQKSLKKHYNPE 304
Query: 93 PNQNTEL 99
+ + ++
Sbjct: 305 DDYDFDV 311
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.129 0.368
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,459,040
Number of Sequences: 27539
Number of extensions: 134726
Number of successful extensions: 283
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 280
Number of HSP's gapped (non-prelim): 10
length of query: 139
length of database: 12,573,161
effective HSP length: 74
effective length of query: 65
effective length of database: 10,535,275
effective search space: 684792875
effective search space used: 684792875
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 55 (26.2 bits)
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