GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002499-TA|BGIBMGA002499-PA|IPR001762|Disintegrin,
IPR006025|Peptidase M, neutral zinc metallopeptidases, zinc-binding
site, IPR001590|Peptidase M12B, ADAM/reprolysin, IPR001010|Thionin,
IPR011047|Quinonprotein alcohol dehydrogenase-like
         (1246 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    25   4.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    25   4.3  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    25   4.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   5.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   5.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   9.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   9.8  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 217 PVVYSVLTANASDDGRHVNKRATVDPKKTTCL 248
           PVVY V    A   GR V+ R     K T+C+
Sbjct: 328 PVVYGVFNIRARRTGRKVSPRVNT-IKHTSCI 358


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 555 HCDGKRAACP--SSRHKP-------NRTRCDKELVCYMGECTGSIC---LAYGLESCQCS 602
           +CD K+ A P  S+ H         + T C +   C+ G  T  +C   L Y   +  C 
Sbjct: 83  YCDNKQQANPPISTEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNERTHSCD 142

Query: 603 -PRSDDPRSACELCCRKPGG 621
            P + D      LC   P G
Sbjct: 143 WPENVDGCQKHPLCNDDPNG 162


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 217 PVVYSVLTANASDDGRHVNKRATVDPKKTTCL 248
           PVVY V    A   GR V+ R     K T+C+
Sbjct: 328 PVVYGVFNIRARRTGRKVSPRVNT-IKHTSCI 358


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 119 EIHRRKKRWLPEDEMQDDQPKKNPELPLDLDFPYTSN 155
           EI  + K W   +++ DD P +   L   +DFP+  N
Sbjct: 412 EIRHKFKLWNFNNQISDDNPAR--FLQKAMDFPFICN 446


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
            protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 963  CKLTKQMSDVNLRHKKSNSVGQRNGTTESKQNLICHEDNDSAHLYENVTSPETL 1016
            C      SD   +H K+++   + G+++S  +    E+N  + +  NV SP ++
Sbjct: 380  CNKRFMRSDHLAKHVKTHNGNGKKGSSDSCSD---SEENSQSDITNNVNSPASM 430


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 1207 LANKRTYTFGELKNSVPNATSPPPD 1231
            L  K TY + E   ++P  T PP D
Sbjct: 27   LQEKTTYEYYENNQALPPITYPPSD 51


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 1207 LANKRTYTFGELKNSVPNATSPPPD 1231
            L  K TY + E   ++P  T PP D
Sbjct: 18   LQEKTTYEYYENNQALPPITYPPSD 42


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.131    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,827
Number of Sequences: 317
Number of extensions: 14251
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 8
length of query: 1246
length of database: 114,650
effective HSP length: 65
effective length of query: 1181
effective length of database: 94,045
effective search space: 111067145
effective search space used: 111067145
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)