GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002499-TA|BGIBMGA002499-PA|IPR001762|Disintegrin,
IPR006025|Peptidase M, neutral zinc metallopeptidases, zinc-binding
site, IPR001590|Peptidase M12B, ADAM/reprolysin, IPR001010|Thionin,
IPR011047|Quinonprotein alcohol dehydrogenase-like
         (1246 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    31   0.25 
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           30   0.44 
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    28   1.8  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    27   2.3  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 30.7 bits (66), Expect = 0.25
 Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 6/112 (5%)

Query: 544 CRSDNGCRDAAHCDGKRAACPSSRHKPNRTRCDKELVCYMGECTGSICLAYGLESCQCSP 603
           C ++  C   A        CP     P   RC+     Y G+ TG        + C C+ 
Sbjct: 778 CPNNGACMQMAGDTVICLECPVGYFGP---RCELCSDGYYGDPTGVYGSVRMCQPCDCNG 834

Query: 604 RSDDPRSACELCCRKPGGQCLSSFHWNTAPYDVPDMYAKPGTPCNDYNGYCD 655
             D P +     C +  G+CL   H    P+    +    G P  + +G C+
Sbjct: 835 NVD-PNAVGN--CNRTTGECLKCIHNTAGPHCDQCLPGHFGDPLAEPHGSCE 883


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 29.9 bits (64), Expect = 0.44
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 897 IERKRHEAAAQHPPADPKLNTFSRTKPHNAARLENTPSNASTGEKTQHQDKGS 949
           + R+   ++  H P  P  + +   + H+A    N+ SN+STG   QHQ   S
Sbjct: 62  VPREHATSSPYHAPPSPANSHYEPMECHSAV---NSSSNSSTGYLHQHQQSSS 111


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 119 EIHRRKKRWLPEDEMQDDQPKKNPELPLDLDFPYTSNGDPFDSKL-STRKPKTKIDKSNL 177
           E+    K   P D+ +   P    ELP D   P   +G P +  L   ++ + + D+   
Sbjct: 36  ELQLADKPEAPVDDAEQPLPPNGDELPEDAPEPVPEDGSPDEEHLEEEQEEEAEADEEEA 95

Query: 178 ITKVRLDSEES 188
                 +SEES
Sbjct: 96  DESESEESEES 106


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 774 LKNKQGDKAPLSDGAKKRLHAEAFRLAHERLG 805
           +KN Q  K+P  DG  K  +  AF +    LG
Sbjct: 453 IKNSQSRKSPGPDGIPKEFYLRAFDVIERELG 484


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.131    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,383,035
Number of Sequences: 2123
Number of extensions: 61503
Number of successful extensions: 173
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 168
Number of HSP's gapped (non-prelim): 6
length of query: 1246
length of database: 516,269
effective HSP length: 72
effective length of query: 1174
effective length of database: 363,413
effective search space: 426646862
effective search space used: 426646862
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)