GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002499-TA|BGIBMGA002499-PA|IPR001762|Disintegrin,
IPR006025|Peptidase M, neutral zinc metallopeptidases, zinc-binding
site, IPR001590|Peptidase M12B, ADAM/reprolysin, IPR001010|Thionin,
IPR011047|Quinonprotein alcohol dehydrogenase-like
         (1246 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    33   0.014
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    29   0.24 
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.95 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   6.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   6.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   8.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   8.9  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 33.1 bits (72), Expect = 0.014
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 3/83 (3%)

Query: 152 YTSNGDPFDSKLSTRKPKT-KIDKSNLITKVRLDSEESRPKPKTHVEVIKSKPGVGVISK 210
           + S+ +     +S RK K  K  KS  I  V  +++ +     T  E +     V V +K
Sbjct: 54  FGSSNEALPQPISKRKDKEHKKKKSKTILAVNAEADITLKNAGTPPEAVSYN--VAVPTK 111

Query: 211 DIVKKEPVVYSVLTANASDDGRH 233
            I++K+P V +V   +A+D G H
Sbjct: 112 SILEKKPDVTTVELVDATDPGEH 134


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
            75 protein.
          Length = 900

 Score = 29.1 bits (62), Expect = 0.24
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 969  MSDVNLRHKKSNSVGQRNGTTESKQNLICHEDNDSAHLYENVTSPETLAPKSCSMPRRQH 1028
            M +    HKK  ++ Q++ + E++  +I        HL+  +TSP   +P S +   +  
Sbjct: 637  MDEAYKPHKKFRALRQKD-SAEAEPAVIVQHTQSQLHLH--LTSPPARSPSSQAQASQCP 693

Query: 1029 GTAIARQSSYGHLPRAQPRPHRRSATSLAAAEPDLDHFY 1067
             TA    S++  L R+     R +A  L     D+ H Y
Sbjct: 694  QTASLLSSTHSTLARSLMEGPRMTAEQL--KRTDIIHNY 730


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 27.1 bits (57), Expect = 0.95
 Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 6/64 (9%)

Query: 514 KPCTLTEHSVCSPSQGPCCTASCTLKFGDKCRSDNGCRDAAHCDGKRAAC--PSSRHKPN 571
           K C L+ +S  +      C   C  +    C S NG   A HC+  RAAC   SS  K  
Sbjct: 91  KECELSPNSTIAVC---VCMRKCPRRHRPVCAS-NGKIYANHCELHRAACHSGSSLTKSR 146

Query: 572 RTRC 575
             RC
Sbjct: 147 LMRC 150


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 6.7
 Identities = 14/56 (25%), Positives = 25/56 (44%)

Query: 763  LRTRAYRNKKDLKNKQGDKAPLSDGAKKRLHAEAFRLAHERLGGPEQSPEVAVELA 818
            L  R  R  K+ +  Q +     +     +H  A + A    GGP++ PE A +++
Sbjct: 1640 LGDRMQRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGGPDKIPETAEDIS 1695


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 6.7
 Identities = 14/56 (25%), Positives = 25/56 (44%)

Query: 763  LRTRAYRNKKDLKNKQGDKAPLSDGAKKRLHAEAFRLAHERLGGPEQSPEVAVELA 818
            L  R  R  K+ +  Q +     +     +H  A + A    GGP++ PE A +++
Sbjct: 1636 LGDRMQRPMKESQENQQNAETQRERYYATIHKVALQQAANTGGGPDKIPETAEDIS 1691


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 8.9
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 301 KRIKVHTLDALKDPAYRFPNNYGVEKYL 328
           +R ++  L++ K     +PNN  +EK+L
Sbjct: 292 ERNRLQLLESFKRKVNFYPNNQDIEKFL 319


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 8.9
 Identities = 15/65 (23%), Positives = 28/65 (43%)

Query: 873  FRFSVKICKSDKTKVVLDKSSKPDIERKRHEAAAQHPPADPKLNTFSRTKPHNAARLENT 932
            +   VK  K+ K   V+ +S++      +   A      + + N  +  + +N AR+ N 
Sbjct: 972  YELEVKDQKNGKPPSVVSRSTQTSANNDKDTNAVVTQSKEARDNITATKQLNNKARIGNG 1031

Query: 933  PSNAS 937
            P N S
Sbjct: 1032 PINQS 1036


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.131    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,118
Number of Sequences: 429
Number of extensions: 17402
Number of successful extensions: 40
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 31
Number of HSP's gapped (non-prelim): 11
length of query: 1246
length of database: 140,377
effective HSP length: 66
effective length of query: 1180
effective length of database: 112,063
effective search space: 132234340
effective search space used: 132234340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)