Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002498-TA|BGIBMGA002498-PA|undefined
(135 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.009
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.012
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 30 0.14
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.0
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 1.3
SPAC607.03c |snu13||U3 snoRNP-associated protein Snu13|Schizosac... 26 2.3
SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity fac... 25 3.1
SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex |... 25 4.1
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 25 5.4
SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomy... 25 5.4
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 5.4
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 5.4
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 24 7.1
SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|... 24 7.1
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 24 9.4
SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit L37|... 24 9.4
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 24 9.4
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 33.9 bits (74), Expect = 0.009
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 6 IAGNDLVLGSHNSSLSPSAELQLEERIKNFGYHNPRILADKSKSSTVVPQQASIAASTGP 65
++ +D + S SSLS S + + + A S SS+ + + +++S+ P
Sbjct: 164 LSSSDPLTSSTFSSLSSSTSSS-QPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSP 222
Query: 66 SQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHAAFKLSFDSPQTSSSTGTCK 125
S + S + + SSS ST L SS+ + A+ S S +SSS+ +
Sbjct: 223 SSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSS 282
Query: 126 LITARTTLT 134
+ +T++
Sbjct: 283 PTSTSSTIS 291
Score = 28.7 bits (61), Expect = 0.33
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 44 ADKSKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGD 103
+ S SS+++ +S ++S + T +S S + + SSS S+ S+
Sbjct: 264 SSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSS 323
Query: 104 NHAAFKLSFDSPQTSSST 121
+ + SF S TSSS+
Sbjct: 324 SSMSSSSSFSSSPTSSSS 341
Score = 27.9 bits (59), Expect = 0.58
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 47 SKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHA 106
S SST+ +S ++ T S +S S + L SSS+S+ SS + +
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTL---SSSSMSSSSSFSSSPTSSSS 341
Query: 107 AFKLSFDSPQTSSSTGT 123
S SP +SS + T
Sbjct: 342 TISSSSSSPSSSSFSST 358
Score = 27.9 bits (59), Expect = 0.58
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 47 SKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHA 106
SKSS+ S ++ST S T +S S + HSSS+S+H+ SS+ + A
Sbjct: 362 SKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRP---ASSSSHSSSLSSHKS-SSSSKSSSA 417
Query: 107 AFKLSFDSPQTSSSTGT 123
+F TSS + +
Sbjct: 418 PVSSAFYHNSTSSRSSS 434
Score = 25.4 bits (53), Expect = 3.1
Identities = 20/77 (25%), Positives = 32/77 (41%)
Query: 47 SKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHA 106
S SST+ S ++ S + S S + A SSS S+ SS+ +
Sbjct: 225 SSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPT 284
Query: 107 AFKLSFDSPQTSSSTGT 123
+ + S +SSS+ T
Sbjct: 285 STSSTISSSSSSSSSPT 301
Score = 24.6 bits (51), Expect = 5.4
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 47 SKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHA 106
S SS+ +S++ S+ PS + +S S + SSS S+ + SS+ + +
Sbjct: 223 SSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSS 282
Query: 107 ----AFKLSFDSPQTSSSTGTCKLITARTT 132
+ +S S +SS T T I++ ++
Sbjct: 283 PTSTSSTISSSSSSSSSPTSTSSTISSSSS 312
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 33.5 bits (73), Expect = 0.012
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 49 SSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHAAF 108
SS+ P +S ++S+ PS + ++S S + + SSS S+ SS+ + +
Sbjct: 149 SSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKS 208
Query: 109 KLSFDSPQTSSSTGTCKLITART 131
S S ++SS + IT+ T
Sbjct: 209 SASPSSSKSSSKFSSSSFITSTT 231
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.9 bits (64), Expect = 0.14
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 47 SKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHA 106
S SS+ P +S +T PS + +S S + SSS S+ SS+ + +
Sbjct: 137 SSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSS-------SSSSSSSSSSSSSSSSSSSSS 189
Query: 107 AFKLSFDSPQTSSSTGTCKLITARTT 132
+ S S +SSS+ + IT+ T+
Sbjct: 190 SSSSSSSSSSSSSSSSSSVPITSSTS 215
Score = 29.9 bits (64), Expect = 0.14
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 44 ADKSKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGD 103
+ S SS+ +S ++S+ S + +S S + + SSS S+ + SST
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSS 216
Query: 104 NHAAFKLSFDSPQTSS-STGTCKLITARTTLT 134
+H++ S S +SS + + IT ++ T
Sbjct: 217 SHSSSSSSSSSSSSSSRPSSSSSFITTMSSST 248
Score = 26.6 bits (56), Expect = 1.3
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 49 SSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHAAF 108
SS+ V S ++S+ PS + + S + + SSS S+ SS+ + ++
Sbjct: 128 SSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187
Query: 109 KLSFDSPQTSSSTGT 123
S S +SSS+ +
Sbjct: 188 SSSSSSSSSSSSSSS 202
Score = 25.4 bits (53), Expect = 3.1
Identities = 19/80 (23%), Positives = 36/80 (45%)
Query: 44 ADKSKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGD 103
+ S ++T P +S ++S+ S + +S S + + SSS S+ SS+
Sbjct: 145 SSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 204
Query: 104 NHAAFKLSFDSPQTSSSTGT 123
+ + S S SSS+ +
Sbjct: 205 SSSVPITSSTSSSHSSSSSS 224
Score = 25.0 bits (52), Expect = 4.1
Identities = 20/91 (21%), Positives = 40/91 (43%)
Query: 44 ADKSKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGD 103
+ S SS+ +S ++S+ S + +S S + + SSSV SS
Sbjct: 161 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSS 220
Query: 104 NHAAFKLSFDSPQTSSSTGTCKLITARTTLT 134
+ ++ S S + SSS+ +++ T ++
Sbjct: 221 SSSSSSSSSSSSRPSSSSSFITTMSSSTFIS 251
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 27.1 bits (57), Expect = 1.0
Identities = 17/79 (21%), Positives = 33/79 (41%)
Query: 18 SSLSPSAELQLEERIKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQPTHRASCSYG 77
S +P ++L + +NP+ + S +++ VP+ S + S + T Y
Sbjct: 178 SQANPIDAVRLASNEASGTNNNPKEIEMNSDTTSSVPKSGSTSFSANVTSSTSMVYLLYS 237
Query: 78 THLHCLIAQHSSSVSTHRR 96
H+ +I + S S R
Sbjct: 238 VHVDKIIQYYVDSFSVSER 256
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 1.0
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Query: 6 IAGNDLVLGSHNSSLSPSAELQLEERIKNFGYHNPRI----LADKSKSSTVVPQQASIAA 61
I +D+V G ++ S L+ ++ Y+ L S +S+ + +S+A+
Sbjct: 34 ILADDIVHGYTPATYLSSVPTLLKRATTSYNYNTSSASSSSLTSSSAASSSLTSSSSLAS 93
Query: 62 STGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHAAFKLSFDSPQ-TSSS 120
S+ S + + S T + +SS +T L SS+ + + S S SSS
Sbjct: 94 SSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSS 153
Query: 121 TGTCKLITARTTLT 134
T + L ++ T T
Sbjct: 154 TTSSSLASSSTNST 167
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 1.3
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 39 NPRILADKSKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQ 98
N ++ ++K S TV P +SI+ + P+ T +S TH + +H
Sbjct: 3673 NSKVTSNKVPS-TVSPHSSSISDTKSPATVTISSSSGQFTHSTFSTGSTMHNTVSHATST 3731
Query: 99 SST-GDNHA---AFKLSFDSPQT--SSSTGTCKLITARTTLTK 135
SS+ +H +FD+ Q+ SSS+G L T ++L K
Sbjct: 3732 SSSFTTSHLPTNTLASTFDNSQSIFSSSSGVPGLSTKSSSLGK 3774
>SPAC607.03c |snu13||U3 snoRNP-associated protein
Snu13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 125
Score = 25.8 bits (54), Expect = 2.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 38 HNPRILADKSKSSTVVPQQASIAASTGPSQPTHRAS 73
H P + DK+ VP +A++ + G S+P AS
Sbjct: 65 HLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISAS 100
>SPAC22G7.10 |||mRNA cleavage and polyadenylation specificity factor
complex subunit, Fip1 homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 3.1
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 38 HNPRILADKSKSSTVVPQQASIAASTGPSQPTHRASCSYG 77
+NP +S+S P S A T +QPTH + SYG
Sbjct: 254 NNPSSSRRESESPANSPNITSSAGMTH-AQPTHNPTSSYG 292
>SPAC2F3.03c |rpa49|rpa51|DNA-directed RNA polymerase I complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 25.0 bits (52), Expect = 4.1
Identities = 14/67 (20%), Positives = 30/67 (44%)
Query: 2 IKERIAGNDLVLGSHNSSLSPSAELQLEERIKNFGYHNPRILADKSKSSTVVPQQASIAA 61
+ E+ A L G+ S + E + + G +++++ K++ +P Q IAA
Sbjct: 138 VMEQRANLGLAFGTRKSQKAIMEESANRVKAETLGDVKDQLVSNVQKATEALPTQEDIAA 197
Query: 62 STGPSQP 68
+ +P
Sbjct: 198 AQAQDRP 204
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 24.6 bits (51), Expect = 5.4
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Query: 47 SKSSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHA 106
S +S P S++AS + S S + + SSS S+ SS+G +H
Sbjct: 504 SSASASYPS-TSMSASLSSVHTSSATSSSKSSSSSSSRSGSSSSSSSRSGSTSSSGSSHT 562
Query: 107 AFKLSFDSPQTSSSTGTCKLITART 131
S + SST T + T
Sbjct: 563 ITSTSQSVHTSGSSTSTSSVAVTST 587
>SPAC1F8.06 |fta5|sma5|Sim4 and Mal2 associated |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 385
Score = 24.6 bits (51), Expect = 5.4
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 49 SSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTH--RRLQSSTGDNHA 106
+ST+ P+ S ++ST TH +S + T I+ SS+ S + + +T +
Sbjct: 45 TSTITPETPSSSSSTFVPISTHTSSATNTTSGQLSISSSSSTSSEYSSSSIPITTVSSSD 104
Query: 107 AFKLSFDSPQTSSSTGTCKLITA 129
+F S ++SS+ T +I +
Sbjct: 105 SFIPSSSQTISASSSTTDNVIVS 127
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 24.6 bits (51), Expect = 5.4
Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 49 SSTVVPQQASIAASTGPSQPTHRASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHAAF 108
SS P +S + TG +S +Y + + S ST+ SS+ D+ +
Sbjct: 645 SSQTTPTSSS--SITGSQSLKETSSPAYVSSTVSYTSSSVDSSSTYNSTGSSSSDSQSFS 702
Query: 109 KLSFDSPQTSSSTGTCKLITARTTL 133
++ P T+ ++ ++++ T++
Sbjct: 703 GTTYSDPTTTITSEVSSILSSPTSM 727
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 24.6 bits (51), Expect = 5.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 85 AQHSSSVSTHRRLQSSTGDNHAAFKLSFDSPQTSSSTGTCKLIT 128
++HSSS S+H Q + A + TSSS+ T I+
Sbjct: 326 SKHSSSKSSHDSSQGLESTSSIALNPTSSISSTSSSSSTSSAIS 369
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 24.2 bits (50), Expect = 7.1
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 72 ASCSYGTHLHCLIAQHSSSVSTHRRLQSSTGDNHAAFKLSFDS 114
A S T++ L S VST RRL +ST +A+ S DS
Sbjct: 615 AHISLHTNIVALQTYAKSIVSTSRRLYASTSRYVSAWLASDDS 657
>SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 24.2 bits (50), Expect = 7.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 2 IKERIAGNDLVLGSHNSSLSPSAELQLEERIK 33
+ E I G D+ G H+S A ++L +++K
Sbjct: 215 LAEVILGRDIQSGQHSSVQDAQATMELYKKVK 246
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 23.8 bits (49), Expect = 9.4
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 15 SHNSSLSPSAELQLEERIKNFGYHNPRILADKSKSST----VVPQQASIAASTGPSQPTH 70
S +SS SP + + + + N P I SKSST V P AS+++ T PT
Sbjct: 284 SISSSSSPFKK-KTQSHLPNRTTEVPSISKQLSKSSTSIATVAPSLASVSSVTKSPSPTP 342
Query: 71 RAS 73
+++
Sbjct: 343 QSA 345
>SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit
L37|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 23.8 bits (49), Expect = 9.4
Identities = 8/39 (20%), Positives = 20/39 (51%)
Query: 37 YHNPRILADKSKSSTVVPQQASIAASTGPSQPTHRASCS 75
Y N +L SS+ + +++ +++ P +P H + +
Sbjct: 24 YSNTLVLRSSRNSSSSLVKRSYVSSRVSPKKPQHNSDAT 62
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 23.8 bits (49), Expect = 9.4
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 80 LHCLIAQHSSSVSTHRRLQSSTGDNHAAFKLSFDSPQTSSSTG-TCKLITARTTLTK 135
+HCL S+ R +S+ + K S D+P TSS G T L+ + L K
Sbjct: 62 VHCLDIPTVRPGSSMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSNALNK 118
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.122 0.340
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,684
Number of Sequences: 5004
Number of extensions: 20660
Number of successful extensions: 106
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 45
length of query: 135
length of database: 2,362,478
effective HSP length: 66
effective length of query: 69
effective length of database: 2,032,214
effective search space: 140222766
effective search space used: 140222766
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)
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