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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002497-TA|BGIBMGA002497-PA|undefined
         (253 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC088356-1|AAH88356.1|  518|Homo sapiens malate dehydrogenase 1B...   105   1e-22
BC033509-1|AAH33509.1|  283|Homo sapiens MDH1B protein protein.       105   1e-22
AC008269-1|AAX93274.1|  283|Homo sapiens unknown protein.             105   1e-22
Y19205-1|CAC80724.1|  845|Homo sapiens SLITL1 protein.                 33   0.97 
BC113012-1|AAI13013.1|  845|Homo sapiens SLIT and NTRK-like fami...    33   0.97 
BC113011-1|AAI13012.1|  845|Homo sapiens SLIT and NTRK-like fami...    33   0.97 
AY358828-1|AAQ89187.1|  733|Homo sapiens LSGV9197 protein.             33   0.97 
AL109653-2|CAC18888.1|  845|Homo sapiens SLIT and NTRK-like fami...    33   0.97 
AL109653-1|CAI41645.1|  724|Homo sapiens SLIT and NTRK-like fami...    33   0.97 
AK091015-1|BAC03566.1|  724|Homo sapiens protein ( Homo sapiens ...    33   0.97 
AB058757-1|BAB47483.1|  572|Homo sapiens KIAA1854 protein protein.     33   0.97 
BC023641-1|AAH23641.1|  645|Homo sapiens ZC3H14 protein protein.       31   5.2  
BC011793-1|AAH11793.1|  736|Homo sapiens zinc finger CCCH-type c...    31   5.2  
AY578060-1|AAS90299.1|  736|Homo sapiens putative NY-REN-37 anti...    31   5.2  
AY393007-1|AAS85945.1|  176|Homo sapiens immunoglobulin heavy ch...    30   6.8  
AB073608-1|BAD38645.1|  362|Homo sapiens putative protein produc...    30   6.8  
BC010082-1|AAH10082.1|  386|Homo sapiens ETNK2 protein protein.        30   9.0  
AL592146-9|CAI16603.1|  394|Homo sapiens ethanolamine kinase 2 p...    30   9.0  
AL592146-8|CAI16602.1|  386|Homo sapiens ethanolamine kinase 2 p...    30   9.0  
AL592146-6|CAI16600.1|  217|Homo sapiens ethanolamine kinase 2 p...    30   9.0  
AL592146-5|CAI16599.2|  184|Homo sapiens ethanolamine kinase 2 p...    30   9.0  
AK001623-1|BAA91793.1|  394|Homo sapiens protein ( Homo sapiens ...    30   9.0  

>BC088356-1|AAH88356.1|  518|Homo sapiens malate dehydrogenase 1B,
           NAD (soluble) protein.
          Length = 518

 Score =  105 bits (252), Expect = 1e-22
 Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 4/154 (2%)

Query: 4   RIVIAGESQCETFAQVCLVADYISQNLPNFCYEQIKKSVLEWQAWLSKINQKNKWHHINS 63
           + VIAG + C  +A+  LVADY+ +NLP+F   +I +    W+ WL  + +KNKW H NS
Sbjct: 3   KFVIAGRADCPYYAKTELVADYLQKNLPDFRIHKITQRPEVWEDWLKDVCEKNKWSHKNS 62

Query: 64  PIVWKEMLMKGSKPVYIGGASEFLEYCYSYYNFDAFMASSKFCGLV-KNFGQYQEKLKVE 122
           PI+W+E+L +G K + +GG +EFLE+   YY+  + M +     +  +N G + EK + E
Sbjct: 63  PIIWRELLDRGGKGLLLGGYNEFLEHAQLYYDVTSSMTTELMMVIAQENLGAHIEKEQEE 122

Query: 123 TFSKPTAEFSKV-IASEMKPNEKCHKNIVITISG 155
              K      +V I S   P   C+  I I  SG
Sbjct: 123 EALKTCINPLQVWITSASAP--ACYNLIPILTSG 154


>BC033509-1|AAH33509.1|  283|Homo sapiens MDH1B protein protein.
          Length = 283

 Score =  105 bits (252), Expect = 1e-22
 Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 4   RIVIAGESQCETFAQVCLVADYISQNLPNFCYEQIKKSVLEWQAWLSKINQKNKWHHINS 63
           + VIAG + C  +A+  LVADY+ +NLP+F   +I +    W+ WL  + +KNKW H NS
Sbjct: 3   KFVIAGRADCPYYAKTELVADYLQKNLPDFRIHKITQRPEVWEDWLKDVCEKNKWSHKNS 62

Query: 64  PIVWKEMLMKGSKPVYIGGASEFLEYCYSYYNFDAFMASSKFCGLV-KNFGQYQEKLKVE 122
           PI+W+E+L +G K + +GG +EFLE+   YY+  + M +     +  +N G + EK + E
Sbjct: 63  PIIWRELLDRGGKGLLLGGYNEFLEHAQLYYDVTSSMTTELMMVIAQENLGAHIEKEQEE 122

Query: 123 TFSKPTAEFSKV-IASEMKPNE--KCHKNIVITISGVSNPLAIHILSGLLE 170
              K      +V I SE    E     KN+  T       LA H ++  L+
Sbjct: 123 EALKTCINPLQVWITSEWVKREFVAILKNLTTTGRQFGGILAAHSIATTLK 173


>AC008269-1|AAX93274.1|  283|Homo sapiens unknown protein.
          Length = 283

 Score =  105 bits (252), Expect = 1e-22
 Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 4/171 (2%)

Query: 4   RIVIAGESQCETFAQVCLVADYISQNLPNFCYEQIKKSVLEWQAWLSKINQKNKWHHINS 63
           + VIAG + C  +A+  LVADY+ +NLP+F   +I +    W+ WL  + +KNKW H NS
Sbjct: 3   KFVIAGRADCPYYAKTELVADYLQKNLPDFRIHKITQRPEVWEDWLKDVCEKNKWSHKNS 62

Query: 64  PIVWKEMLMKGSKPVYIGGASEFLEYCYSYYNFDAFMASSKFCGLV-KNFGQYQEKLKVE 122
           PI+W+E+L +G K + +GG +EFLE+   YY+  + M +     +  +N G + EK + E
Sbjct: 63  PIIWRELLDRGGKGLLLGGYNEFLEHAQLYYDVTSSMTTELMMVIAQENLGAHIEKEQEE 122

Query: 123 TFSKPTAEFSKV-IASEMKPNE--KCHKNIVITISGVSNPLAIHILSGLLE 170
              K      +V I SE    E     KN+  T       LA H ++  L+
Sbjct: 123 EALKTCINPLQVWITSEWVKREFVAILKNLTTTGRQFGGILAAHSIATTLK 173


>Y19205-1|CAC80724.1|  845|Homo sapiens SLITL1 protein.
          Length = 845

 Score = 33.1 bits (72), Expect = 0.97
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 135 IASEMKPNEKCHKNIVITISGVSNPLA---IHILSGLLEMSNLGLS--KVYIYDKDC--S 187
           + + + PNE  + +  +T+   +N L        SGL  +  L L+  K+ I  +D    
Sbjct: 73  LLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLG 132

Query: 188 AEHMELVERQCNYIMTCNSGKTVKYVEKLGMALTHTNLLIILDHVLFKYVLV 239
            E +E ++   NYI    +G   K + KL + + + NLL+ L   +F++VL+
Sbjct: 133 LESLEYLQADYNYISAIEAGAFSK-LNKLKVLILNDNLLLSLPSNVFRFVLL 183


>BC113012-1|AAI13013.1|  845|Homo sapiens SLIT and NTRK-like family,
           member 2 protein.
          Length = 845

 Score = 33.1 bits (72), Expect = 0.97
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 135 IASEMKPNEKCHKNIVITISGVSNPLA---IHILSGLLEMSNLGLS--KVYIYDKDC--S 187
           + + + PNE  + +  +T+   +N L        SGL  +  L L+  K+ I  +D    
Sbjct: 73  LLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLG 132

Query: 188 AEHMELVERQCNYIMTCNSGKTVKYVEKLGMALTHTNLLIILDHVLFKYVLV 239
            E +E ++   NYI    +G   K + KL + + + NLL+ L   +F++VL+
Sbjct: 133 LESLEYLQADYNYISAIEAGAFSK-LNKLKVLILNDNLLLSLPSNVFRFVLL 183


>BC113011-1|AAI13012.1|  845|Homo sapiens SLIT and NTRK-like family,
           member 2 protein.
          Length = 845

 Score = 33.1 bits (72), Expect = 0.97
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 135 IASEMKPNEKCHKNIVITISGVSNPLA---IHILSGLLEMSNLGLS--KVYIYDKDC--S 187
           + + + PNE  + +  +T+   +N L        SGL  +  L L+  K+ I  +D    
Sbjct: 73  LLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLG 132

Query: 188 AEHMELVERQCNYIMTCNSGKTVKYVEKLGMALTHTNLLIILDHVLFKYVLV 239
            E +E ++   NYI    +G   K + KL + + + NLL+ L   +F++VL+
Sbjct: 133 LESLEYLQADYNYISAIEAGAFSK-LNKLKVLILNDNLLLSLPSNVFRFVLL 183


>AY358828-1|AAQ89187.1|  733|Homo sapiens LSGV9197 protein.
          Length = 733

 Score = 33.1 bits (72), Expect = 0.97
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 135 IASEMKPNEKCHKNIVITISGVSNPLA---IHILSGLLEMSNLGLS--KVYIYDKDC--S 187
           + + + PNE  + +  +T+   +N L        SGL  +  L L+  K+ I  +D    
Sbjct: 73  LLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLG 132

Query: 188 AEHMELVERQCNYIMTCNSGKTVKYVEKLGMALTHTNLLIILDHVLFKYVLV 239
            E +E ++   NYI    +G   K + KL + + + NLL+ L   +F++VL+
Sbjct: 133 LESLEYLQADYNYISAIEAGAFSK-LNKLKVLILNDNLLLSLPSNVFRFVLL 183


>AL109653-2|CAC18888.1|  845|Homo sapiens SLIT and NTRK-like family,
           member 2 protein.
          Length = 845

 Score = 33.1 bits (72), Expect = 0.97
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 135 IASEMKPNEKCHKNIVITISGVSNPLA---IHILSGLLEMSNLGLS--KVYIYDKDC--S 187
           + + + PNE  + +  +T+   +N L        SGL  +  L L+  K+ I  +D    
Sbjct: 73  LLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLG 132

Query: 188 AEHMELVERQCNYIMTCNSGKTVKYVEKLGMALTHTNLLIILDHVLFKYVLV 239
            E +E ++   NYI    +G   K + KL + + + NLL+ L   +F++VL+
Sbjct: 133 LESLEYLQADYNYISAIEAGAFSK-LNKLKVLILNDNLLLSLPSNVFRFVLL 183


>AL109653-1|CAI41645.1|  724|Homo sapiens SLIT and NTRK-like family,
           member 2 protein.
          Length = 724

 Score = 33.1 bits (72), Expect = 0.97
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 135 IASEMKPNEKCHKNIVITISGVSNPLA---IHILSGLLEMSNLGLS--KVYIYDKDC--S 187
           + + + PNE  + +  +T+   +N L        SGL  +  L L+  K+ I  +D    
Sbjct: 73  LLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLG 132

Query: 188 AEHMELVERQCNYIMTCNSGKTVKYVEKLGMALTHTNLLIILDHVLFKYVLV 239
            E +E ++   NYI    +G   K + KL + + + NLL+ L   +F++VL+
Sbjct: 133 LESLEYLQADYNYISAIEAGAFSK-LNKLKVLILNDNLLLSLPSNVFRFVLL 183


>AK091015-1|BAC03566.1|  724|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33696 fis, clone BRAWH2003964, weakly similar to
           SLIT PROTEIN PRECURSOR. ).
          Length = 724

 Score = 33.1 bits (72), Expect = 0.97
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 135 IASEMKPNEKCHKNIVITISGVSNPLA---IHILSGLLEMSNLGLS--KVYIYDKDC--S 187
           + + + PNE  + +  +T+   +N L        SGL  +  L L+  K+ I  +D    
Sbjct: 73  LLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLG 132

Query: 188 AEHMELVERQCNYIMTCNSGKTVKYVEKLGMALTHTNLLIILDHVLFKYVLV 239
            E +E ++   NYI    +G   K + KL + + + NLL+ L   +F++VL+
Sbjct: 133 LESLEYLQADYNYISAIEAGAFSK-LNKLKVLILNDNLLLSLPSNVFRFVLL 183


>AB058757-1|BAB47483.1|  572|Homo sapiens KIAA1854 protein protein.
          Length = 572

 Score = 33.1 bits (72), Expect = 0.97
 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 135 IASEMKPNEKCHKNIVITISGVSNPLA---IHILSGLLEMSNLGLS--KVYIYDKDC--S 187
           + + + PNE  + +  +T+   +N L        SGL  +  L L+  K+ I  +D    
Sbjct: 79  LLTRLYPNEFVNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLG 138

Query: 188 AEHMELVERQCNYIMTCNSGKTVKYVEKLGMALTHTNLLIILDHVLFKYVLV 239
            E +E ++   NYI    +G   K + KL + + + NLL+ L   +F++VL+
Sbjct: 139 LESLEYLQADYNYISAIEAGAFSK-LNKLKVLILNDNLLLSLPSNVFRFVLL 189


>BC023641-1|AAH23641.1|  645|Homo sapiens ZC3H14 protein protein.
          Length = 645

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 153 ISGVSNPLAIHILSGLLEMSNLGLSKVYIYDKDCSAEHMELVERQCNYIMTCNSGKTVKY 212
           + G+ +P  +H+LS  LE  N   S   + +   + +  +L+ER C Y   C +G    Y
Sbjct: 467 LRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER-CKYWPACKNGDECAY 525


>BC011793-1|AAH11793.1|  736|Homo sapiens zinc finger CCCH-type
           containing 14 protein.
          Length = 736

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 153 ISGVSNPLAIHILSGLLEMSNLGLSKVYIYDKDCSAEHMELVERQCNYIMTCNSGKTVKY 212
           + G+ +P  +H+LS  LE  N   S   + +   + +  +L+ER C Y   C +G    Y
Sbjct: 557 LRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER-CKYWPACKNGDECAY 615


>AY578060-1|AAS90299.1|  736|Homo sapiens putative NY-REN-37 antigen
           isoform 1 protein.
          Length = 736

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 153 ISGVSNPLAIHILSGLLEMSNLGLSKVYIYDKDCSAEHMELVERQCNYIMTCNSGKTVKY 212
           + G+ +P  +H+LS  LE  N   S   + +   + +  +L+ER C Y   C +G    Y
Sbjct: 557 LRGLLHPQQLHLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLER-CKYWPACKNGDECAY 615


>AY393007-1|AAS85945.1|  176|Homo sapiens immunoglobulin heavy
          chain protein.
          Length = 176

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 11/39 (28%), Positives = 16/39 (41%)

Query: 20 CLVADYISQNLPNFCYEQIKKSVLEWQAWLSKINQKNKW 58
          C  + Y   N P     Q     LEW  W++ +N   K+
Sbjct: 18 CKASGYTFNNYPMHWVRQAPGQSLEWMGWINTVNNNTKY 56


>AB073608-1|BAD38645.1|  362|Homo sapiens putative protein product
           of HMFT1716 protein.
          Length = 362

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 31  PNFCYEQIKKSVLEWQ-AWLSKINQKNKWHHINSPIVW--KEMLMKGSKPVYIGGASEFL 87
           P+   +  K  VLE + AWL     K     + SP+V+   ++L K      I G   F+
Sbjct: 189 PSLSADVPKVEVLEQELAWL-----KEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 243

Query: 88  EYCYSYYNFDAFMASSKF 105
           +Y Y+ YN+ AF   + F
Sbjct: 244 DYEYAGYNYQAFDIGNHF 261


>BC010082-1|AAH10082.1|  386|Homo sapiens ETNK2 protein protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 31  PNFCYEQIKKSVLEWQ-AWLSKINQKNKWHHINSPIVW--KEMLMKGSKPVYIGGASEFL 87
           P+   +  K  VLE + AWL     K     + SP+V+   ++L K      I G   F+
Sbjct: 213 PSLSADVPKVEVLERELAWL-----KEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 267

Query: 88  EYCYSYYNFDAFMASSKF 105
           +Y Y+ YN+ AF   + F
Sbjct: 268 DYEYAGYNYQAFDIGNHF 285


>AL592146-9|CAI16603.1|  394|Homo sapiens ethanolamine kinase 2
           protein.
          Length = 394

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 31  PNFCYEQIKKSVLEWQ-AWLSKINQKNKWHHINSPIVW--KEMLMKGSKPVYIGGASEFL 87
           P+   +  K  VLE + AWL     K     + SP+V+   ++L K      I G   F+
Sbjct: 213 PSLSADVPKVEVLERELAWL-----KEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 267

Query: 88  EYCYSYYNFDAFMASSKF 105
           +Y Y+ YN+ AF   + F
Sbjct: 268 DYEYAGYNYQAFDIGNHF 285


>AL592146-8|CAI16602.1|  386|Homo sapiens ethanolamine kinase 2
           protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 31  PNFCYEQIKKSVLEWQ-AWLSKINQKNKWHHINSPIVW--KEMLMKGSKPVYIGGASEFL 87
           P+   +  K  VLE + AWL     K     + SP+V+   ++L K      I G   F+
Sbjct: 213 PSLSADVPKVEVLERELAWL-----KEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 267

Query: 88  EYCYSYYNFDAFMASSKF 105
           +Y Y+ YN+ AF   + F
Sbjct: 268 DYEYAGYNYQAFDIGNHF 285


>AL592146-6|CAI16600.1|  217|Homo sapiens ethanolamine kinase 2
           protein.
          Length = 217

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 31  PNFCYEQIKKSVLEWQ-AWLSKINQKNKWHHINSPIVW--KEMLMKGSKPVYIGGASEFL 87
           P+   +  K  VLE + AWL     K     + SP+V+   ++L K      I G   F+
Sbjct: 79  PSLSADVPKVEVLERELAWL-----KEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 133

Query: 88  EYCYSYYNFDAFMASSKF 105
           +Y Y+ YN+ AF   + F
Sbjct: 134 DYEYAGYNYQAFDIGNHF 151


>AL592146-5|CAI16599.2|  184|Homo sapiens ethanolamine kinase 2
           protein.
          Length = 184

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 31  PNFCYEQIKKSVLEWQ-AWLSKINQKNKWHHINSPIVW--KEMLMKGSKPVYIGGASEFL 87
           P+   +  K  VLE + AWL     K     + SP+V+   ++L K      I G   F+
Sbjct: 35  PSLSADVPKVEVLERELAWL-----KEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 89

Query: 88  EYCYSYYNFDAFMASSKF 105
           +Y Y+ YN+ AF   + F
Sbjct: 90  DYEYAGYNYQAFDIGNHF 107


>AK001623-1|BAA91793.1|  394|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10761 fis, clone NT2RP3004669, weakly similar to
           ETHANOLAMINE KINASE (EC 2.7.1.82). ).
          Length = 394

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 8/78 (10%)

Query: 31  PNFCYEQIKKSVLEWQ-AWLSKINQKNKWHHINSPIVW--KEMLMKGSKPVYIGGASEFL 87
           P+   +  K  VLE + AWL     K     + SP+V+   ++L K      I G   F+
Sbjct: 213 PSLSADVPKVEVLERELAWL-----KEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 267

Query: 88  EYCYSYYNFDAFMASSKF 105
           +Y Y+ YN+ AF   + F
Sbjct: 268 DYEYAGYNYQAFDIGNHF 285


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.135    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,689,182
Number of Sequences: 224733
Number of extensions: 1449752
Number of successful extensions: 2646
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2642
Number of HSP's gapped (non-prelim): 22
length of query: 253
length of database: 73,234,838
effective HSP length: 88
effective length of query: 165
effective length of database: 53,458,334
effective search space: 8820625110
effective search space used: 8820625110
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)

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