GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002495-TA|BGIBMGA002495-PA|IPR008075|Lipocalin-1
receptor, IPR006876|LMBR1-like conserved region
         (281 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132157-1|AAD34745.1|  527|Drosophila melanogaster unknown prot...   168   6e-42
AE014297-3631|AAF56340.1|  527|Drosophila melanogaster CG5807-PA...   168   6e-42
BT003212-1|AAO24967.1|  527|Drosophila melanogaster RE18250p pro...   165   6e-41

>AF132157-1|AAD34745.1|  527|Drosophila melanogaster unknown
           protein.
          Length = 527

 Score =  168 bits (409), Expect = 6e-42
 Identities = 87/170 (51%), Positives = 104/170 (61%), Gaps = 2/170 (1%)

Query: 19  KFRRRDSEDYFTADEDEVKVYRISLWLCTFXXXXXXXXXXXXXXXIVSNEVLILYPNSYY 78
           +FRRRD +D ++ DEDEV VYRIS WLCTF               I SNEVL+LYPNSYY
Sbjct: 44  RFRRRDRDDLYSNDEDEVLVYRISFWLCTFTLAVAEGAAMLLPVSIASNEVLLLYPNSYY 103

Query: 79  VKWLNSSLIQGLWNHXXXXXXXXXXXXXPFAYLFSESSGFPG-CRGLKGRVYETFIVXXX 137
           VKWLNSSLIQGLWNH             PF YLFSES+GF G  +G+  RVYETF V   
Sbjct: 104 VKWLNSSLIQGLWNHVFLFSNLSLFIFLPFVYLFSESTGFVGNKKGILPRVYETFTVFML 163

Query: 138 XXXXXXXXXYVISAWIEGDRSGVDALLNLWT-YLPFLYSCVSFVGVLMLL 186
                     V+SA    ++      LNL + +LPFLYSCVSF+GV+++L
Sbjct: 164 MAIIVLVLTAVLSAVFGIEKLQFFWFLNLGSVHLPFLYSCVSFLGVMLML 213


>AE014297-3631|AAF56340.1|  527|Drosophila melanogaster CG5807-PA
           protein.
          Length = 527

 Score =  168 bits (409), Expect = 6e-42
 Identities = 87/170 (51%), Positives = 104/170 (61%), Gaps = 2/170 (1%)

Query: 19  KFRRRDSEDYFTADEDEVKVYRISLWLCTFXXXXXXXXXXXXXXXIVSNEVLILYPNSYY 78
           +FRRRD +D ++ DEDEV VYRIS WLCTF               I SNEVL+LYPNSYY
Sbjct: 44  RFRRRDRDDLYSNDEDEVLVYRISFWLCTFTLAVAEGAAMLLPVSIASNEVLLLYPNSYY 103

Query: 79  VKWLNSSLIQGLWNHXXXXXXXXXXXXXPFAYLFSESSGFPG-CRGLKGRVYETFIVXXX 137
           VKWLNSSLIQGLWNH             PF YLFSES+GF G  +G+  RVYETF V   
Sbjct: 104 VKWLNSSLIQGLWNHVFLFSNLSLFIFLPFVYLFSESTGFVGNKKGILPRVYETFTVFML 163

Query: 138 XXXXXXXXXYVISAWIEGDRSGVDALLNLWT-YLPFLYSCVSFVGVLMLL 186
                     V+SA    ++      LNL + +LPFLYSCVSF+GV+++L
Sbjct: 164 MAIIVLVLTAVLSAVFGIEKLQFFWFLNLGSVHLPFLYSCVSFLGVMLML 213


>BT003212-1|AAO24967.1|  527|Drosophila melanogaster RE18250p
           protein.
          Length = 527

 Score =  165 bits (401), Expect = 6e-41
 Identities = 86/170 (50%), Positives = 103/170 (60%), Gaps = 2/170 (1%)

Query: 19  KFRRRDSEDYFTADEDEVKVYRISLWLCTFXXXXXXXXXXXXXXXIVSNEVLILYPNSYY 78
           +FRRRD +D ++ DEDEV VYRIS WLCTF               I SNEVL+LYPNSYY
Sbjct: 44  RFRRRDRDDLYSNDEDEVLVYRISFWLCTFTLAVAEGAAMLLPVSIASNEVLLLYPNSYY 103

Query: 79  VKWLNSSLIQGLWNHXXXXXXXXXXXXXPFAYLFSESSGFPG-CRGLKGRVYETFIVXXX 137
           VKWLNSSLIQGLWNH             PF YLFSES+GF G  +G+  RVYETF V   
Sbjct: 104 VKWLNSSLIQGLWNHVFLFSNLSLFIFLPFVYLFSESTGFVGNKKGILPRVYETFTVFML 163

Query: 138 XXXXXXXXXYVISAWIEGDRSGVDALLNLWT-YLPFLYSCVSFVGVLMLL 186
                     V+SA    ++      LNL + +LP LYSCVSF+GV+++L
Sbjct: 164 MAIIVLVLTAVLSAVFGIEKLQFFWFLNLGSVHLPSLYSCVSFLGVMLML 213


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.328    0.146    0.479 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,588,252
Number of Sequences: 52641
Number of extensions: 336089
Number of successful extensions: 613
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 604
Number of HSP's gapped (non-prelim): 3
length of query: 281
length of database: 24,830,863
effective HSP length: 84
effective length of query: 197
effective length of database: 20,409,019
effective search space: 4020576743
effective search space used: 4020576743
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)