Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002492-TA|BGIBMGA002492-PA|IPR006575|RWD
(238 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0338 - 21121289-21121350,21121456-21121528,21121808-211218... 97 1e-20
01_06_1254 + 35761046-35761162,35761332-35761416,35761877-357620... 40 0.001
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 36 0.029
04_04_0350 + 24591002-24591123,24592020-24592091,24592343-245924... 33 0.20
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042... 33 0.27
03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520... 32 0.47
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424... 31 0.82
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 30 1.9
01_06_1095 - 34484064-34484492,34484716-34485041,34485505-34485955 30 1.9
01_06_0256 - 27923497-27923855,27923944-27924016,27924116-27924121 30 1.9
11_06_0648 + 25873779-25874279,25874418-25875548 29 4.4
11_04_0097 + 13448740-13450725 29 4.4
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 29 4.4
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 28 5.8
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 28 5.8
02_01_0080 + 558915-558962,559016-559209,559644-559965 28 5.8
02_05_0390 + 28557722-28557937,28558440-28558514,28558597-285587... 28 7.7
>01_05_0338 -
21121289-21121350,21121456-21121528,21121808-21121892,
21122031-21122122,21122479-21122607,21123253-21123310,
21123448-21123517,21123643-21123676,21123850-21123917,
21124057-21124261
Length = 291
Score = 97.1 bits (231), Expect = 1e-20
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 20/199 (10%)
Query: 2 DYNYEQTSEVEALDSIYFGDMTVIE--------TKPFHKFSIPIKSEGFDDGEGLACHL- 52
DY EQ EVEAL +I D+ I+ T + + + + FD+ + L
Sbjct: 47 DYEQEQEMEVEALQAILMDDIKEIDPSESGLSTTARCFQIVLSPQDDDFDESAYVPVQLA 106
Query: 53 -VFTYTSKYPDELPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEW 111
+F +T KYPDE P++ + + + D L L ++ ENLGM MV+TLV++ Q+W
Sbjct: 107 LIFAHTEKYPDEPPLLNVKSVRGMKS-EDLASLKEKLEQEATENLGMAMVYTLVTSAQDW 165
Query: 112 LNETWDKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIP-AKRE 170
L+E + + + E +++ EE E+ G VTVESFLAWR +FE ++ + AK
Sbjct: 166 LSEKYGQNAGDGE----SEENEAEEEEVIVPHGEAVTVESFLAWRDRFEAELALQRAKLM 221
Query: 171 RE----AKDKNKLTGRELF 185
E A + KL+GR+ F
Sbjct: 222 PESALTAPKEKKLSGRQYF 240
>01_06_1254 +
35761046-35761162,35761332-35761416,35761877-35762017,
35762118-35762206,35762519-35762701,35763509-35763697,
35763808-35763938,35764023-35764125,35765123-35765308
Length = 407
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 118 KVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWR--KQFEIDMGIPAKREREAKD 175
K E E +A + E+ K T +T + F+ W+ K E + G+ A R AK+
Sbjct: 249 KALLEEESEKIAIEDEIEDQRKKVKTTTPMTTDLFMEWKRKKAEEREAGLAALRAERAKN 308
Query: 176 KNKLTGRELFLQDTTLNESDLKFLDDGDAVKVDE 209
++++GRELF+ D+++ F+DD +A V E
Sbjct: 309 -DRMSGRELFMADSSV------FVDDAEAYDVYE 335
>09_04_0151 -
15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 112 LNETWDKVKKEREERI-LAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAKRE 170
L ET +K+K +E+I L +KA+ + E+K+ + R +E L R F +D KR
Sbjct: 837 LKETENKLKNSIQEKIKLESEKAEAQREIKKLQSQRTLLERDLRKRDSFTVD-----KRH 891
Query: 171 REAKDKNKLTG 181
++ +L G
Sbjct: 892 EQSVKSKELAG 902
>04_04_0350 +
24591002-24591123,24592020-24592091,24592343-24592448,
24593138-24593242,24593693-24593815,24594163-24594630,
24595226-24595351,24595430-24595516,24595615-24595701,
24595807-24595903,24596519-24596636,24596923-24596995,
24597504-24597566,24597666-24597832,24598444-24598631,
24598909-24599057,24599193-24599442,24599597-24599855,
24599977-24600073,24606696-24606776,24606914-24606970,
24607264-24607395,24607476-24607562,24607941-24608049,
24608134-24608270,24608841-24608945,24609566-24609654,
24609757-24609859,24609960-24610064,24610282-24610293,
24611013-24611078
Length = 1279
Score = 33.1 bits (72), Expect = 0.20
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 20/107 (18%)
Query: 10 EVEALDSIYFGDMTVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKYPDELPIIEI 69
E+ AL SI+ D V P +F+I I+ C + YP + P + +
Sbjct: 37 ELTALGSIFLEDFKVTSESPQTRFTICIR-----------CF------AGYPHKCPKLRV 79
Query: 70 DNEENFDNIVDKEELLTHLAEQGK--ENLGMVMVFTLVSAGQEWLNE 114
E+ D LL+ L +Q G VM+F LV A QE+L+E
Sbjct: 80 LPEKTLSR-EDANRLLSLLVDQANIYSREGRVMIFNLVEAAQEFLSE 125
>11_06_0061 -
19702893-19703869,19703960-19704098,19704166-19704287,
19704362-19704416,19704508-19704624,19704718-19705413,
19706358-19706393,19707190-19708236
Length = 1062
Score = 32.7 bits (71), Expect = 0.27
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 19 FGDMTVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKYPDELPIIEIDNEENFDNI 78
F +M V P +P+K EG A L+++YT + + D+ E F+
Sbjct: 872 FEEMDVFRKMPQQPHFLPLKHHPLGLREGTALGLMWSYTDAVDNISKLCITDSMEIFE-- 929
Query: 79 VDKEELLTHLAEQGKENLGMVMVFT-LVSAGQEWLNETWD--KVKKEREERILAKQKAD 134
D + LT L E G + + T L+ ++ N D K+K++ ++ A + D
Sbjct: 930 -DHIKTLTILEENGFSVQSLQQILTKLLQIRSDYTNSLRDGEKLKEQIADKAFAVSRVD 987
>03_06_0326 +
33150599-33150907,33151013-33151104,33151961-33152057,
33152585-33152656,33152750-33152812,33152905-33153045,
33153603-33153698,33154120-33154404,33154692-33154851,
33154947-33155089,33155688-33155861,33156386-33156652,
33156737-33156856
Length = 672
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 117 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 162
+KVKK REER + K + +EE L E R + + ++F D
Sbjct: 170 EKVKKRREERAIEKAQHEEEMALLARERARAEFQDWEKKEEEFHFD 215
>10_08_0849 +
21040043-21040199,21040620-21040678,21040925-21042494,
21042583-21042710,21042793-21043033,21043160-21043710
Length = 901
Score = 31.1 bits (67), Expect = 0.82
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 126 RILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGIPAKREREAKDKNKLTGRELF 185
R L +Q +A F G + S R++F+I G +KRE+ A L G
Sbjct: 366 RYLHQQPCTSQAP--EFSGRESSKFSIKEVRRRFKIVTG-DSKREKNAIPAENLPGDSHQ 422
Query: 186 LQDTTLNESDLKFLDDGDAVKVDESLFQN 214
L+D+ + + D + L +G S F+N
Sbjct: 423 LKDSVVEDKDPRHLTEGSLPDKAASNFKN 451
>03_01_0096 +
763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 29.9 bits (64), Expect = 1.9
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 62 DELPIIEIDNEENFDNIVD-KEELLTHLAEQGKE---NLGMVMVFTLVSAGQEWLNETWD 117
D L +E DN +N +N KE+ +L E+ KE L M + S Q+ NE +
Sbjct: 727 DSLRKLE-DNCQNLENKAKGKEQFYKNLQEKVKELESQLDSKMHSQITSEKQQ--NELFG 783
Query: 118 KVKKEREERILAKQKADEEAELK 140
K+K++ E +QK EE+E K
Sbjct: 784 KLKEKEEMCTTLQQKIAEESEHK 806
>01_06_1095 - 34484064-34484492,34484716-34485041,34485505-34485955
Length = 401
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 72 EENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEW-LNETWDKVKKEREERILAK 130
EEN +N+ LL +E +E + + + QEW E + +K + +E++ +
Sbjct: 31 EENLENLEQPLPLLMPSSEDHREQQLVPVPWLQQDQDQEWHEQEQFLPLKNQNQEQLQDQ 90
Query: 131 QKADEEAELKRFEG 144
Q ++ E +R+ G
Sbjct: 91 QPLQDQEETRRYLG 104
>01_06_0256 - 27923497-27923855,27923944-27924016,27924116-27924121
Length = 145
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 60 YPDELPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNETWDKV 119
+ DE + + E + IVDK L H ++GKE MV + + ++ E +K
Sbjct: 33 FDDEKSTLTVIGEVDVVVIVDK---LRH-PKKGKEKREGYMVEVMAVSDEK--KEAEEKK 86
Query: 120 KKEREERILAKQKADEEAELKRFE 143
KK+ EE+ K+K EE E K+ E
Sbjct: 87 KKDEEEK-KKKEKEKEEEEKKKKE 109
>11_06_0648 + 25873779-25874279,25874418-25875548
Length = 543
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 95 NLGMVMVFTLVSAGQEWLNETWDK------VKKEREERILAKQKADEEAELKRFEGTRVT 148
+LG+VM+ L + E W+K V++E+ E + K EE + E T
Sbjct: 393 SLGVVMLEVLTGKKPYFSKEEWEKEKTEERVEEEKREECEQEGKNTEEGKESEREEDGKT 452
Query: 149 VESFLAWRKQ 158
E + WRK+
Sbjct: 453 KEEWHEWRKR 462
>11_04_0097 + 13448740-13450725
Length = 661
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 117 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEID 162
+ + KE EER A+ KA EEA + +R +E+ L +K+ E D
Sbjct: 581 EALAKEEEERKKAEAKAKEEAAAR---ASRAAIEAVLGRKKEGEND 623
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 139 LKRFEGTRVTVESFLAWRKQFEIDMGIPAKREREAKDKNKLTG 181
++ EGTR T S +A+ ++ E+ +G PAKR+ +N G
Sbjct: 57 IENSEGTRTT-PSVVAFNQKGELLVGTPAKRQAVTNPQNTFFG 98
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 109 QEWLNETWDKVKKEREERILAKQKADE----EAELKRFEGTRVTVESFLAWRKQFE 160
Q + + KV + + E I+ K+K E E E+K E + T ESF++W K+ E
Sbjct: 1480 QRTIKDVSAKVLQLKSE-IIDKEKGYEARLKELEIKMQEKEKDTAESFISWNKERE 1534
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 64 LPIIEIDNEENFDNIVDKEELLTHLAEQGKE------NLGMVMVFTLVSAGQEWLNETWD 117
+P++ N++ V +EEL HL +G + G T + AG +WL E +
Sbjct: 259 VPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEME 318
Query: 118 KVKKEREERILAKQKADEE 136
+ K R E ++A+ + E+
Sbjct: 319 RSK--RTEVLMARTETAEK 335
>02_01_0080 + 558915-558962,559016-559209,559644-559965
Length = 187
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 79 VDKEELLTHLAEQGKENLGMVMV---FTLVSAGQEWLNETWDKVKKEREERILAKQKADE 135
VDK +++T A G + + F A ++ E ++VKK +++ K+K +E
Sbjct: 30 VDKMQMVTAAAGGGSSSRRRKAIKRNFKAKEADRKETEEEGNQVKKITSQQLKRKRKKEE 89
Query: 136 EAELKRFEGTRVTVES 151
+A K+ + R T E+
Sbjct: 90 DASEKKKKKKRQTEEA 105
>02_05_0390 +
28557722-28557937,28558440-28558514,28558597-28558766,
28559046-28559124,28559320-28559516,28560300-28560387,
28560453-28560679,28560763-28560919,28561467-28561517
Length = 419
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 7 QTSEVEALDSIYFGDMTVIETKPFHKF 33
Q EV AL++I+ GDM ++E K +F
Sbjct: 69 QEDEVIALEAIFGGDMVILENKDSLRF 95
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.133 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,551,776
Number of Sequences: 37544
Number of extensions: 279829
Number of successful extensions: 621
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 611
Number of HSP's gapped (non-prelim): 22
length of query: 238
length of database: 14,793,348
effective HSP length: 80
effective length of query: 158
effective length of database: 11,789,828
effective search space: 1862792824
effective search space used: 1862792824
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -