GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002490-TA|BGIBMGA002490-PA|IPR001478|PDZ/DHR/GLGF
         (78 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           21   6.6  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    20   8.7  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    20   8.7  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)

Query: 23 GEAGLPHVIY 32
          G  G PHVIY
Sbjct: 85 GRKGFPHVIY 94


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 26  GLPHVIY 32
           GLPHVIY
Sbjct: 96  GLPHVIY 102


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 15  LGFGFSLLGEAGLPHVIYEIEE 36
           + FG S  G AG P V   + E
Sbjct: 324 VSFGLSKCGTAGYPGVYTNVVE 345


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,874
Number of Sequences: 2123
Number of extensions: 2409
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 78
length of database: 516,269
effective HSP length: 52
effective length of query: 26
effective length of database: 405,873
effective search space: 10552698
effective search space used: 10552698
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)