GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002489-TA|BGIBMGA002489-PA|undefined
         (140 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   0.78 
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    23   0.78 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   1.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   1.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   3.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   4.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   4.1  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            20   7.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    20   7.2  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
          protein 11 protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 9  ALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDL 61
          A+A  + +NS+Y T   N  + +++  D+  + ++ V  +L     +PD  +L
Sbjct: 13 AIASSLAENSKYTTKYDNVDLDEIIKSDR--LLKNYVNCLLEKGKCTPDGAEL 63


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 3/36 (8%)

Query: 37  KDGVSRSEVFDMLHSRD--DSPDNFDLPTF-PEDVE 69
           KD ++   ++D+ H+ D    P+ FD   F PE+V+
Sbjct: 83  KDTITIIHIYDLHHNPDIYPDPEKFDPDRFLPENVQ 118


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query: 90  DSEVRKDSQKLRRPAKREEPVGLAAG 115
           + E  + S K R+P     P+G  AG
Sbjct: 43  NDEEERPSFKSRKPKNYSAPIGFVAG 68


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 8/84 (9%)

Query: 5   DESSALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTF 64
           DE   +++EV +    K + A  +  + L D+   + +S  ++ +      P  F   T 
Sbjct: 257 DEFLQISEEVANIWGLKKVYAPVVDGEFLTDEPIAIIKSGDYNHV------PMIFGYTTR 310

Query: 65  PEDVEDM--KSEVPGLPDSQAEFL 86
              + +M  K+E PG+P+   EF+
Sbjct: 311 EGMIVEMMRKNETPGMPNDFEEFV 334


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 81  SQAEFLQVADSEVRKDSQKLRRPAKREEPVGLAAGIMVIVTCSIVFVAYSAL 132
           SQ + +    S+  K           + P G ++ +  ++TC +   A+S+L
Sbjct: 509 SQEQIISWRSSDDAKGGGGGSGSGNNQPPGGPSSHVSAVLTCKVCDQAFSSL 560



 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/40 (22%), Positives = 19/40 (47%)

Query: 55 SPDNFDLPTFPEDVEDMKSEVPGLPDSQAEFLQVADSEVR 94
          +P +   P+ P  + +       LP+S+    + +DS V+
Sbjct: 56 TPGDVPTPSSPRSISEDPLNCRDLPNSRCNSRESSDSLVQ 95


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 72  KSEVPGLPDSQAEFL 86
           K+E PG+P+   EF+
Sbjct: 318 KTETPGMPNDFEEFV 332


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 72  KSEVPGLPDSQAEFL 86
           K+E PG+P+   EF+
Sbjct: 320 KNETPGMPNDFEEFV 334


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)

Query: 47  DMLHSRDDSPDNFDLPTFPEDV 68
           DM H    SP N     +P DV
Sbjct: 80  DMTHGASISPQNTPPAGYPMDV 101


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/22 (40%), Positives = 10/22 (45%)

Query: 47  DMLHSRDDSPDNFDLPTFPEDV 68
           DM H    SP N     +P DV
Sbjct: 80  DMTHGASISPQNTPPAGYPMDV 101


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.132    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,972
Number of Sequences: 317
Number of extensions: 1054
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 140
length of database: 114,650
effective HSP length: 51
effective length of query: 89
effective length of database: 98,483
effective search space:  8764987
effective search space used:  8764987
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)