GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002489-TA|BGIBMGA002489-PA|undefined
         (140 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   0.94 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   2.2  
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    23   5.0  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.0  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    22   8.7  
AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding pr...    22   8.7  
AY062202-1|AAL58563.1|  151|Anopheles gambiae cytochrome P450 CY...    22   8.7  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    22   8.7  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 0.94
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 51  SRDDSPDNFDLPTFPEDVEDMKSEVPGLPD 80
           S  D PD    P   E+ +D++ E+  +PD
Sbjct: 283 SASDKPDTDGEPEKDEENDDLRRELKSIPD 312


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 77  GLPDSQAEFLQVADSEVRKDSQKLRRPAKRE 107
           GL      +LQV+  E+++ +Q+ R   +RE
Sbjct: 694 GLQQKPPRYLQVSMDELKRHTQQRREQLQRE 724


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
          protein.
          Length = 134

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 4  RDESSALAKEVKDNSRYKTLEANAIMSKLL 33
          RDE+S L K  K+  +  TLE    ++K L
Sbjct: 63 RDENSTLEKLAKNKQKPITLEQGEKLAKEL 92


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 63  TFPEDVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAKRE-EPVGLAAGIMVIVT 121
           T  E+  D K       D + EF    DS+  +D   +     RE  P     GI++ V 
Sbjct: 720 TIDEERNDNKCTFFDEDDCRFEF-SYNDSD--QDKVVVTAQENRECPPKVFMLGIVLAVI 776

Query: 122 CSIVFVAYSALIIWR 136
             +V +  + L++W+
Sbjct: 777 AVVVLIGMAVLLLWK 791


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
          protein.
          Length = 932

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 44 EVFDMLHSRDDSPDNFDLPTFPEDV 68
          E  D   S DD P+  D P F ++V
Sbjct: 59 EFVDDYDSYDDQPEPSDEPVFEKNV 83


>AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding
          protein AgamOBP22 protein.
          Length = 131

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 33 LVDDKDGVSRSEVFDMLHSRDDSPDNF 59
          L DDK GV     ++ L + DD+ + F
Sbjct: 59 LYDDKYGVDLQANWENLGNSDDADEEF 85


>AY062202-1|AAL58563.1|  151|Anopheles gambiae cytochrome P450
           CYP4H14 protein.
          Length = 151

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 55  SPDNFDLPTFPEDVEDMKSEVPGLPDS 81
           +P+ FD   F ED E  +     LP S
Sbjct: 116 NPNQFDPSRFAEDAESKRGPFDYLPFS 142


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
          protein OBPjj83b protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 33 LVDDKDGVSRSEVFDMLHSRDDSPDNF 59
          L DDK GV     ++ L + DD+ + F
Sbjct: 72 LYDDKYGVDLQANWENLGNSDDADEEF 98


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.132    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,337
Number of Sequences: 2123
Number of extensions: 4034
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 8
length of query: 140
length of database: 516,269
effective HSP length: 58
effective length of query: 82
effective length of database: 393,135
effective search space: 32237070
effective search space used: 32237070
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)