Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002489-TA|BGIBMGA002489-PA|undefined
(140 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 34 0.043
Z35597-3|CAA84646.2| 498|Caenorhabditis elegans Hypothetical pr... 31 0.23
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 30 0.70
AL132876-13|CAD21663.1| 214|Caenorhabditis elegans Hypothetical... 29 1.2
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 2.1
AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical ... 28 2.1
AL132876-10|CAC48129.1| 106|Caenorhabditis elegans Hypothetical... 28 2.8
Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical pr... 27 3.7
AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical ... 27 3.7
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 27 4.9
U50198-1|AAA91259.2| 529|Caenorhabditis elegans Hypothetical pr... 27 4.9
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 27 4.9
Z93385-5|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 27 6.5
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 27 6.5
U55373-6|AAC25890.2| 890|Caenorhabditis elegans Hypothetical pr... 27 6.5
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 27 6.5
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 27 6.5
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 27 6.5
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 27 6.5
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 6.5
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 27 6.5
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 26 8.6
Z81071-5|CAB03011.1| 200|Caenorhabditis elegans Hypothetical pr... 26 8.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 26 8.6
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 26 8.6
U55373-7|AAD34666.1| 805|Caenorhabditis elegans Hypothetical pr... 26 8.6
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 26 8.6
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 33.9 bits (74), Expect = 0.043
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 36 DKDGVSRSEVFDM-LHSRDDSPDNFDLPTFPEDVEDMKSEVPGLPDSQAEFLQVADSEVR 94
D+D V +S + L D+S D+ ED+ED + ++ L + + E + +D E
Sbjct: 309 DEDTVEKSRILKKNLDGSDESDDD-------EDLEDEEEDLDDLLEDEDELEEDSDDEEA 361
Query: 95 KDSQKLRRPAKREEP 109
+++QK+ + AK+ P
Sbjct: 362 QEAQKVVKKAKKSAP 376
>Z35597-3|CAA84646.2| 498|Caenorhabditis elegans Hypothetical
protein C36E8.3 protein.
Length = 498
Score = 31.5 bits (68), Expect = 0.23
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 53 DDSPDNFDLPTFPEDVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAKREEPVGL 112
DD + +D +P+ LP A+ ++ D +DS + + K+EEP G
Sbjct: 384 DDEDETYDEEDYPKSQLMPNGGHTVLP-LDADKMKKTDKTTSEDSDEWKGHKKKEEPKGG 442
Query: 113 AAGIMVIVTCSIVFVAYSA 131
A + +IV + VA+ A
Sbjct: 443 VATLTMIVVFLVCIVAWLA 461
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.9 bits (64), Expect = 0.70
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 10/99 (10%)
Query: 4 RDESSALAKEVKDNSRYKTLEANAIMSK--LLVDDKDGVSRSEVFDMLHSRDDSPDNFDL 61
R +S+ AK + K E S L + KDG+S +++ SRD PD+ D+
Sbjct: 212 RRQSALFAKFFSKVEKKKVAEPQKESSNWYLPFERKDGMSLAKII----SRDPLPDDADI 267
Query: 62 PTFPEDVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQKL 100
T E++ + S + +S A+ + + S+ R KL
Sbjct: 268 FTQHEEINSIASFI----ESAAKIVPIESSKARNMKAKL 302
>AL132876-13|CAD21663.1| 214|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 214
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 65 PEDVEDMKSEVPGLPDSQAE----FLQVADSEVRKDSQKLRRPAKREEPVGLA 113
P D+K ++PG P + A +V D +V+ D +KL+ K+++ A
Sbjct: 75 PLQAVDLKMDIPGTPSAAAPDPVVKQEVDDEDVKPDVKKLQEELKKQQAAAAA 127
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 28.3 bits (60), Expect = 2.1
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 6 ESSALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEV--FDMLHSRDDSPDNFDLPT 63
E++ L ++ D L + KL D K GV+ +++ FDM + + PD P+
Sbjct: 190 EATELIRDTPDQKIQLDLNLGILDRKL--DVKSGVASAKISIFDMPKVKKEDPDE-PGPS 246
Query: 64 FPEDVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAKREEPVGLAAGIMV-IVTC 122
P K P ++ + A E+ K+ ++ ++ K + + GI+V ++T
Sbjct: 247 QPSRKSGKKRSRSRSPAAKKFSKKSALDEI-KEMEERKKERKNRKDYWMREGIVVKVITK 305
Query: 123 SIVFVAYSALIIWRRI 138
S+ Y A + R++
Sbjct: 306 SLGSEYYKAKGVVRKV 321
>AF067622-2|AAK68367.1| 651|Caenorhabditis elegans Hypothetical
protein F33E11.3 protein.
Length = 651
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 41 SRSEVFDMLHSRDDSPDNFDLPTFPEDVEDMKSEVPGLPD---SQAEFLQVADSEVRKDS 97
S + FD +D D +LP P+ V ++ E P D S+ L+ + E++K+
Sbjct: 450 SNNPFFDEEDEEEDFKDAPELPEEPKTVPEVVEEAPKTHDHLKSELHLLESRNEELQKER 509
Query: 98 QKL 100
+L
Sbjct: 510 DRL 512
>AL132876-10|CAC48129.1| 106|Caenorhabditis elegans Hypothetical
protein Y105E8A.11 protein.
Length = 106
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 20 YKTLEANAIMSKLLVDDKDGVSRSEVFDM 48
+K EA MSKLL + DG +R EV D+
Sbjct: 28 HKMSEAELKMSKLLTEGIDGCTRVEVHDV 56
>Z49967-7|CAA90257.1| 740|Caenorhabditis elegans Hypothetical
protein F54C9.9 protein.
Length = 740
Score = 27.5 bits (58), Expect = 3.7
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 5 DESSALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTF 64
DE + + +++N K + ++ M +D D + E+ DD + +
Sbjct: 388 DEYYGVEENIQENEDEKPIFSD--MEDSDYEDYDNLDVDELKREEQEADDDDEEDEESVD 445
Query: 65 PEDVEDM-KSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAKR 106
ED +++ KS+ + + + + + A + KD RR +KR
Sbjct: 446 DEDEQEVPKSKKSAMKNGKFDMVAAAQKAMSKDKNDSRRKSKR 488
>AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical
protein T10B5.3 protein.
Length = 295
Score = 27.5 bits (58), Expect = 3.7
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 14 VKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTFPEDVEDMKS 73
+ D + +T + L+V + D S SE FD + S DD + D + ED E +
Sbjct: 197 IADLIKRRTNNVVIVQQPLVVFNNDLDSDSEDFDTIGSDDDGESSED--DWWEDNELKED 254
Query: 74 EVPGLPDSQAEFLQVADSEVRKDS 97
E D + DSE+ DS
Sbjct: 255 EEENQDDDDEDDNDSDDSEMDADS 278
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 78 LPDSQAEFLQVADSEVRK-DSQKLRRPAKREEPVGLAAGIMVIVTCSIVFV 127
+PD++ +V S R + + LR K V LAA +M ++ +IV++
Sbjct: 129 IPDAKRNSKKVVYSHFRNPEDEYLREKQKNRMLVVLAATVMALIGANIVYI 179
>U50198-1|AAA91259.2| 529|Caenorhabditis elegans Hypothetical
protein R04B3.1 protein.
Length = 529
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 4 RDESSALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNF 59
R ES L++EVK + + A++ +++L++ DK + + L + ++P ++
Sbjct: 307 RAESHLLSREVKQQAAPTLVNASSSLNELILLDKSAENDCQSLQCLMDQQNAPCDY 362
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 52 RDDSPDNFDLPTFPE--DVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAKREE 108
+ +S D TF E DVE++K + D + + V + K +K ++P K++E
Sbjct: 19 KSESKKKKDKKTFEEEDDVENVKRKPAESSDDEVVVVVVKKDQKGKRGKKSKKPKKKQE 77
>Z93385-5|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 3 NRDESSALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLP 62
+ D+ K+ K N++ K E++ + + + VS +V +HS D+ + + P
Sbjct: 91 SEDDYKPEKKKSKKNNKKKAQESSEDDDE---ESEGDVSEEDVKPQIHSDDELEEEDEAP 147
Query: 63 TFPEDVEDMKSE 74
T ++ E + E
Sbjct: 148 TTDDEEEQKRKE 159
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
C03D6.4 protein.
Length = 1390
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 66 EDVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQ-KLRRPAKREE 108
E+V+D KSE PD ++E + +++V+++ + ++ P K EE
Sbjct: 1001 EEVKDEKSENEVTPDLKSEEPKSLETKVKEEPKPAVQTPVKEEE 1044
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 3 NRDESSALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLP 62
+ D+ K+ K N++ K E++ + + + VS +V +HS D+ + + P
Sbjct: 91 SEDDYKPEKKKSKKNNKKKAQESSEDDDE---ESEGDVSEEDVKPQIHSDDELEEEDEAP 147
Query: 63 TFPEDVEDMKSE 74
T ++ E + E
Sbjct: 148 TTDDEEEQKRKE 159
>U55373-6|AAC25890.2| 890|Caenorhabditis elegans Hypothetical
protein F26F12.3a protein.
Length = 890
Score = 26.6 bits (56), Expect = 6.5
Identities = 20/99 (20%), Positives = 43/99 (43%)
Query: 7 SSALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTFPE 66
+S + + N R++ LEA VD + + V +L ++D + L +
Sbjct: 79 ASNVLYSMNKNKRWEALEAETTWETTGVDGRSSMPVQIVERVLTAKDTIDNVVSLTEIDK 138
Query: 67 DVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAK 105
+ E ++ E G + + L V + K ++K R+ ++
Sbjct: 139 NGEIVRHETAGGKGANLQTLLVTGTTNTKKTRKARKESE 177
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 26.6 bits (56), Expect = 6.5
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 14 VKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTFPEDVEDMKS 73
V +SRY L+ ++ + K R + + SR SP + + T ED ++S
Sbjct: 435 VDSSSRYDVLKNLESPNQSYHEKKSANGRPPLIQKIFSRSSSPADDIIDTEEEDPHRVRS 494
Query: 74 EVPGLPDSQAEFLQVADSEVRKDSQK-------LRRPAKREEP 109
S Q + +V+KD +K RR ++EEP
Sbjct: 495 -------SSTHVHQNGNGQVKKDQRKRVAQVNQRRRKGRKEEP 530
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 26.6 bits (56), Expect = 6.5
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 14 VKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTFPEDVEDMKS 73
V +SRY L+ ++ + K R + + SR SP + + T ED ++S
Sbjct: 435 VDSSSRYDVLKNLESPNQSYHEKKSANGRPPLIQKIFSRSSSPADDIIDTEEEDPHRVRS 494
Query: 74 EVPGLPDSQAEFLQVADSEVRKDSQK-------LRRPAKREEP 109
S Q + +V+KD +K RR ++EEP
Sbjct: 495 -------SSTHVHQNGNGQVKKDQRKRVAQVNQRRRKGRKEEP 530
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 26.6 bits (56), Expect = 6.5
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 14 VKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTFPEDVEDMKS 73
V +SRY L+ ++ + K R + + SR SP + + T ED ++S
Sbjct: 435 VDSSSRYDVLKNLESPNQSYHEKKSANGRPPLIQKIFSRSSSPADDIIDTEEEDPHRVRS 494
Query: 74 EVPGLPDSQAEFLQVADSEVRKDSQK-------LRRPAKREEP 109
S Q + +V+KD +K RR ++EEP
Sbjct: 495 -------SSTHVHQNGNGQVKKDQRKRVAQVNQRRRKGRKEEP 530
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 26.6 bits (56), Expect = 6.5
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 14 VKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTFPEDVEDMKS 73
V +SRY L+ ++ + K R + + SR SP + + T ED ++S
Sbjct: 434 VDSSSRYDVLKNLESPNQSYHEKKSANGRPPLIQKIFSRSSSPADDIIDTEEEDPHRVRS 493
Query: 74 EVPGLPDSQAEFLQVADSEVRKDSQK-------LRRPAKREEP 109
S Q + +V+KD +K RR ++EEP
Sbjct: 494 -------SSTHVHQNGNGQVKKDQRKRVAQVNQRRRKGRKEEP 529
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 26.6 bits (56), Expect = 6.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 12 KEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSP 56
KE KDN K + A ++ K+L + V R V M S +P
Sbjct: 1666 KEYKDNLNRKVMGALVMLEKMLNEHNGNVPRDVVLKMYDSLGLNP 1710
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 26.6 bits (56), Expect = 6.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 12 KEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSP 56
KE KDN K + A ++ K+L + V R V M S +P
Sbjct: 291 KEYKDNLNRKVMGALVMLEKMLNEHNGNVPRDVVLKMYDSLGLNP 335
>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
protein F09C3.1 protein.
Length = 1391
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 65 PEDVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAKREE 108
P+++ED+KS + + E ++A+ VR + K P R+E
Sbjct: 468 PQNLEDLKSTMQEINAEVEEAFKLAEQVVRINKAKGSEPKVRKE 511
>Z81071-5|CAB03011.1| 200|Caenorhabditis elegans Hypothetical
protein F28F8.5 protein.
Length = 200
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 66 EDVEDMKSEVPGLPD---SQAEFLQVADSEVRKDSQKLR 101
ED++D+ + P LPD S + AD + D +++R
Sbjct: 26 EDIDDILGDAPDLPDDEYSNSVPQGAADGSIENDERRMR 64
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 69 EDMKSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAKREE 108
ED K E P + + E ++ + + +KD + + K+EE
Sbjct: 286 EDKKEEEPKKEEEKKEEVEKKEEDEKKDEEPKKEEEKKEE 325
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Query: 32 LLVDDK-DG-VSRSEVFDMLHSRDDSPDNFDL 61
+L D K DG + ++VF++L S D++P N D+
Sbjct: 15 MLFDKKGDGKIDAAQVFEVLRSLDENPKNSDV 46
>U55373-7|AAD34666.1| 805|Caenorhabditis elegans Hypothetical
protein F26F12.3b protein.
Length = 805
Score = 26.2 bits (55), Expect = 8.6
Identities = 19/89 (21%), Positives = 39/89 (43%)
Query: 17 NSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPTFPEDVEDMKSEVP 76
N R++ LEA VD + + V +L ++D + L ++ E ++ E
Sbjct: 4 NKRWEALEAETTWETTGVDGRSSMPVQIVERVLTAKDTIDNVVSLTEIDKNGEIVRHETA 63
Query: 77 GLPDSQAEFLQVADSEVRKDSQKLRRPAK 105
G + + L V + K ++K R+ ++
Sbjct: 64 GGKGANLQTLLVTGTTNTKKTRKARKESE 92
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 26.2 bits (55), Expect = 8.6
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 2/106 (1%)
Query: 4 RDESSALAKEVKDNSRYKTLEANAIMSKLLVDDKDGVSRSEVFDMLHSRDDSPDNFDLPT 63
+D+ + E KD K + K D+K + E S+D+ ++
Sbjct: 90 KDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEE-SKEKSKDEEKKKDEVKD 148
Query: 64 FPEDVEDMKSEVPGLPDSQAEFLQVADSEVRKDSQKLRRPAKREEP 109
ED E + PG + + E ++ + K +K P K E P
Sbjct: 149 KKED-EKKDDKKPGEKEEKKEEVKKETKKEEKKEEKKEEPKKSEAP 193
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.132 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,329,433
Number of Sequences: 27539
Number of extensions: 133188
Number of successful extensions: 533
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 516
Number of HSP's gapped (non-prelim): 34
length of query: 140
length of database: 12,573,161
effective HSP length: 75
effective length of query: 65
effective length of database: 10,507,736
effective search space: 683002840
effective search space used: 683002840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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