GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002487-TA|BGIBMGA002487-PA|IPR001382|Glycoside
hydrolase, family 47
         (83 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   4.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   4.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    19   7.1  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 19  FETTIRFVGGLLSC 32
           ++ T RF GG L C
Sbjct: 100 WDITYRFYGGFLLC 113


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
          protein.
          Length = 255

 Score = 19.8 bits (39), Expect = 4.0
 Identities = 8/31 (25%), Positives = 16/31 (51%)

Query: 35 LTGDTIFRDKAAEVADTLLPVFETPTGLPYA 65
          + GD  + D+  E  +    +++ P GL +A
Sbjct: 35 VVGDETYCDRYWECVNGQQELYDCPNGLVFA 65


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.0 bits (37), Expect = 7.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 17  SVFETTIRFVGGLLSC 32
           S F T ++ +GG  SC
Sbjct: 695 SAFLTDLKLMGGKWSC 710


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.141    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,501
Number of Sequences: 317
Number of extensions: 519
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 83
length of database: 114,650
effective HSP length: 46
effective length of query: 37
effective length of database: 100,068
effective search space:  3702516
effective search space used:  3702516
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.7 bits)
S2: 36 (18.6 bits)