GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002487-TA|BGIBMGA002487-PA|IPR001382|Glycoside
hydrolase, family 47
         (83 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   2.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    20   4.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   8.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   8.3  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   8.3  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 5   IETVLELQDSELSVFETTIRF 25
           +ET+ +     ++V E T+RF
Sbjct: 653 VETLAQFLTGNMAVTEVTVRF 673


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 11/46 (23%), Positives = 18/46 (39%)

Query: 11  LQDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAEVADTLLPVF 56
           L    + +  TTI+     L+ + LT D + R       D  +  F
Sbjct: 144 LDTGTIGIGNTTIQACPYTLNIFDLTSDKLLRQYRLRAEDINMNTF 189


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 20  ETTIRFVGGLLSCYALT 36
           E TI  + G+L CY  T
Sbjct: 552 ELTIILLAGVLVCYLNT 568


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)

Query: 20  ETTIRFVGGLLSCYALT 36
           E TI  + G+L CY  T
Sbjct: 642 ELTIILLAGVLVCYLNT 658


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 10  ELQDSELSVFETTIRFV 26
           EL+D +  +FE  I+FV
Sbjct: 301 ELEDFDGRLFEFPIKFV 317


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.141    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,878
Number of Sequences: 429
Number of extensions: 578
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 83
length of database: 140,377
effective HSP length: 47
effective length of query: 36
effective length of database: 120,214
effective search space:  4327704
effective search space used:  4327704
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.2 bits)
S2: 37 (19.0 bits)