Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002486-TA|BGIBMGA002486-PA|IPR001382|Glycoside
hydrolase, family 47
(539 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide 1,2-al... 254 2e-68
SPAC23A1.04c |mnl1||alpha mannosidase-like protein|Schizosacchar... 137 3e-33
SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces pom... 33 0.13
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 30 0.71
SPBC30D10.08 |mgm101||mitochondrial nucleoid protein|Schizosacch... 29 2.2
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 28 3.8
SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces ... 27 5.0
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 27 5.0
SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 6.6
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 6.6
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 27 8.7
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 27 8.7
>SPAC2E1P5.01c |mns1|SPAPB1E7.13c|mannosyl-oligosaccharide
1,2-alpha-mannosidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 254 bits (623), Expect = 2e-68
Identities = 169/483 (34%), Positives = 249/483 (51%), Gaps = 27/483 (5%)
Query: 66 QSSVEKQRYIIEMMRHAWNNYKLYAWGKNELKPISKRAHLSSVFGSGEMGATIVDGLDTL 125
+ S ++ I + +W +Y+ Y WGK+E PI KR + G MG I+D LDT+
Sbjct: 41 KGSTRRKALIKKTFIESWTDYETYGWGKDEYYPIIKRGR--NYLRKG-MGWMIIDSLDTM 97
Query: 126 YVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAE 185
+MGL ++ R+W+ N+ D E+SVFETTIR +GGLLS Y L+ D ++ D+A +
Sbjct: 98 MIMGLDEQVLRAREWVNNSLTWNQDDEEVSVFETTIRILGGLLSSYHLSQDKLYLDRAVD 157
Query: 186 VADALLPAFETPTGLPYALINQSTKASRQYHWAGPNSILSELGTLHLEFSYLSDVTGREV 245
+AD LL A+ T TGLP + +N T+ SR+ S +E GT+ +E YLS +TG
Sbjct: 158 LADRLLAAYNTSTGLPRSNVNLGTRKSRKRTREYFVS-TAESGTVQMELRYLSYLTGDPK 216
Query: 246 YRNKVDKIREVLYN--IEKPGDLYPNFINPRTGQWGQRHISLGALGDSFYEYLLKAWLAS 303
Y DK EVL L P +N TG + R+I LG+ GDS+YEYLLK L
Sbjct: 217 YWITADKTMEVLLGDATWSHTGLVPITVNLITGAYVGRNIRLGSHGDSYYEYLLKQDLQL 276
Query: 304 NRGDEQARTMFDTAMQAALDKMLR-VSPSGLAYLAELKYGRVIEE--KMDHLSCFAGGMF 360
R FD ++ ++ +L +P+ AY+AEL G + KMDHL CF G
Sbjct: 277 FSSGTVYRKAFDLSVDGIIEYLLNYTTPNHFAYIAELPGGLEHAQLPKMDHLVCFLPGTL 336
Query: 361 ---ALAATTLE--------NSLSERYMDVARKLTHTCHESYFRSETKLGPEA--FRFSNA 407
A T+LE + ER + +A++L TC+E Y + T L PE F
Sbjct: 337 MWGATNGTSLEAARTSKNWGTRQERDVKLAQELMRTCYEMYNMTATGLAPEIVFFDVDQT 396
Query: 408 VEARAQKSNEKVYILRPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRVEG--GYTG 465
K ++ ++RPET ES FI++R+T+++ YR+WGW + ++ R+ G +T
Sbjct: 397 KNEIYSKRRDQHNLMRPETVESLFILYRITRDEIYREWGWNIFVSFLRYSRLPGRDAFTC 456
Query: 466 LTNVYHQNPQGD-DVQQSYFLAETXXXXXXXXXXXXXXX-XXEWVFNTEAHPLP-IKGKN 522
L +V + + D +S++ AET + FNTEAHP P I+
Sbjct: 457 LDSVESKKVKDQRDKTESFWFAETLKYLYLLFEDDFSILPLTNYTFNTEAHPFPNIENNM 516
Query: 523 PLY 525
LY
Sbjct: 517 DLY 519
>SPAC23A1.04c |mnl1||alpha mannosidase-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 137 bits (332), Expect = 3e-33
Identities = 134/496 (27%), Positives = 222/496 (44%), Gaps = 61/496 (12%)
Query: 57 SSYSGALDSQSSVEKQRYIIEMMRHAWNNYKLYAWGKNELKPISKRAHLSSVFGSGEMGA 116
+S GA++S VE + + H +NNY +A+ +EL P+S +G
Sbjct: 21 NSIVGAINSARMVELRETSRRLFYHGYNNYMQFAFPNDELAPLSCEGLGPDYENPNNIGV 80
Query: 117 ---------TIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGL 167
T+VD LDTL V+G + F++ D + H N E D+++ VFE TIR +GGL
Sbjct: 81 NDVRGDYLLTLVDVLDTLVVLGDREGFQDAVDKVIHHINF-ERDTKVQVFEATIRILGGL 139
Query: 168 LSCYALTGDT-------IFRDK----AAEVADALLPAFETPTGLPYALINQSTKASRQYH 216
LS + + +++ + A E+A+ LLPAF TPTG+P+A IN + Y
Sbjct: 140 LSSHIFASEEKYGFQIPLYKGELLTLATELAERLLPAFRTPTGIPFARINLMKGVA--YR 197
Query: 217 WAGPNSILSELGTLHLEFSYLSDVTGREVYRNKVDKIREVLYNIEKPGDLYPNFINPRTG 276
N + +L LEFS L+ +TG ++ + ++ L N I+ +G
Sbjct: 198 EVTEN-CAAAASSLVLEFSMLTALTGNNKFKASAENAFFSVWKRRSGIGLLGNSIDVLSG 256
Query: 277 QWGQRHISLGALGDSFYEYLLKAWLASNRGDEQARTMFDTAMQAALDKMLRVSPSGLAYL 336
+W +GA DSFYEY K+++ GD + + Q +L+ + + S Y
Sbjct: 257 RWIYPVSGVGAGIDSFYEYAFKSYIF--LGDPR----YLEVWQKSLESLRHYTASLNEYY 310
Query: 337 AELKY---GRVIEEKMDHLSCFAGGMFALAATTLENSLSERYMDVARKLTHTCHESYFRS 393
+ Y G V+ +D LS + G+ LA +++A+K+ H YF
Sbjct: 311 YQNVYSANGMVMSRWVDSLSAYFPGLLVLAGE----------LELAKKM----HLYYFSI 356
Query: 394 ETKLG--PEAFR-FSNAVEARAQKSNEKVYILRPETFESYFIMWRLTKEQKYRDWGWEAV 450
K G PE + ++ ++E Y LRPE ES + ++R TK+ Y G +
Sbjct: 357 YLKFGQLPERYNLYTKSIELNG-------YPLRPEFAESTYYLYRATKDVFYLHVGELLL 409
Query: 451 QALEKHCRVEGGYTGLTNVYHQNPQGDDVQQSYFLAETXXXXXXXXXXX--XXXXXXEWV 508
+E H G+ + N+ + + +S+FL+ET +++
Sbjct: 410 SNIENHLWTPCGFAAVENL--EKYTLSNRMESFFLSETLKYLFLLFDDDNPIHRSHHDFI 467
Query: 509 FNTEAHPLPIKGKNPL 524
F TE H P+ + L
Sbjct: 468 FTTEGHLFPVTNQTRL 483
>SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 288 LGDSFYEYLLKAWLASNRGDEQARTMFDTAMQAALDKMLRVSPSGLAYLAELKYGRVIEE 347
+G+ +L + L R R+ A + ++K++ ++P + L EL +EE
Sbjct: 232 IGNPEIRMMLDSGLRDWRKQRSGRSSSHVASKG-INKVVNINPGDVKSLIELFPQLSVEE 290
Query: 348 KMDHLSCFAGGMFALAATTLENSLSE 373
++HLS G + A + + +SL E
Sbjct: 291 AVEHLSASLGNIDAACESVITSSLPE 316
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 30.3 bits (65), Expect = 0.71
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 132 DEFREGRDWIAEHF--NINEIDSEL-SVFETTIRFV 164
DEFRE WI ++ N +ID+EL F+T +R+V
Sbjct: 287 DEFREQVAWIIDYLLKNRRDIDAELYEPFQTAVRYV 322
>SPBC30D10.08 |mgm101||mitochondrial nucleoid
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 267
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 326 LRVSPSGLAYLAELKYGRVIEEKMDHLSCFAGGMFALAATTLENSLSERYMDVARKLTHT 385
+ + P G+ YL E+KY R++ + F G + LA N S+ V+R+
Sbjct: 126 IEIKPDGILYLPEIKYRRILNK------AFGPGGWGLAPRGNTNVTSK---SVSREYALV 176
Query: 386 CH 387
CH
Sbjct: 177 CH 178
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Query: 401 AFRFSNAVEARAQKSNEKVYILR----PETFESYFIMWRLTKEQKYRD 444
A+ + E +E VY+LR P+T S FI W T++ + D
Sbjct: 122 AYDSVGSFEEHVHSISENVYLLREFDIPKTVYSLFIEWNRTRKHSFLD 169
>SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 655
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 343 RVIEEKMDHLSCFAGGMFALAATTLENS 370
R + EK +HL C+ +F++ T++ NS
Sbjct: 404 RTLLEKSNHLHCYQDDIFSMIQTSVTNS 431
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 27.5 bits (58), Expect = 5.0
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 307 DEQARTMFDTAMQAALDKMLRVSPSGLAYLAELKYGRVIEEKMDHLSC-FAGGMFALAAT 365
D + T + A+DK+L S G +++G V+ +K + L C F +FA + +
Sbjct: 453 DTRESRWLPTVISTAMDKLLINSALGFDSWLVMRHGSVL-QKENRLGCYFCNDIFAPSNS 511
Query: 366 TLENSLSE 373
++ +L +
Sbjct: 512 LVDRTLDQ 519
>SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 206
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 373 ERYMDVARKLTHTCHESYFRSETK-LGPEAFRFSNAVEARAQKSNEKVY 420
+R +A K H H++ + K LG +RF NA E + +NE+ Y
Sbjct: 8 KRKATLAYKKKHDIHDAPVKPRKKNLGNNEWRFKNAGEYFDEDNNEEEY 56
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.1 bits (57), Expect = 6.6
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 203 ALINQSTKASRQYH--WAGPNSILSELGTLHLEFSYLSDVTGREVYRNKVDKIREVLYNI 260
+L NQ T A +Y +A SI +L E SYLSD++ K+ I++ I
Sbjct: 906 SLENQVTIADEKYEFLYAEKQSIEEDLANKQTEISYLSDLS--STLEKKLSSIKKDEQTI 963
Query: 261 -EKPGDLYPNFINPRTG-QWGQRHIS 284
K +L +++N Q +H+S
Sbjct: 964 SSKYKELEKDYLNIMADYQHSSQHLS 989
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 26.6 bits (56), Expect = 8.7
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 356 AGGMFALAATTLENSLSERYMDVARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQKS 415
+G +F AA E + + +++ HT + ++ P F+F+NA + K
Sbjct: 1085 SGVLFGKAA---EWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKK 1141
Query: 416 NEKVYILRPETFESYFIMWRLTKEQK 441
N KV L FE WR++K++K
Sbjct: 1142 NLKVLPLY-NRFEKP-DEWRISKQRK 1165
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 59 YSGALDSQSSVEKQRYIIEMMRHAWNNYKLYAWGKNE 95
Y G + ++ V++++ + +R WN + Y K+E
Sbjct: 18 YRGYVSQENKVKRRKRLFNAIRKLWNERRRYRMPKDE 54
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.133 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,370,592
Number of Sequences: 5004
Number of extensions: 95351
Number of successful extensions: 257
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 239
Number of HSP's gapped (non-prelim): 12
length of query: 539
length of database: 2,362,478
effective HSP length: 76
effective length of query: 463
effective length of database: 1,982,174
effective search space: 917746562
effective search space used: 917746562
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -