Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002486-TA|BGIBMGA002486-PA|IPR001382|Glycoside
hydrolase, family 47
(539 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39877| Best HMM Match : No HMM Matches (HMM E-Value=.) 467 e-131
SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0) 168 1e-41
SB_7286| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0.4) 95 1e-19
SB_23159| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1e-24) 81 2e-15
SB_25089| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 4e-10
SB_46857| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.005
SB_45449| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1.4e-07) 40 0.007
SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_23022| Best HMM Match : CUB (HMM E-Value=0) 30 5.4
SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0) 29 7.1
SB_20006| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_1731| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_7742| Best HMM Match : HEAT (HMM E-Value=9e-23) 29 9.4
>SB_39877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 467 bits (1151), Expect = e-131
Identities = 216/417 (51%), Positives = 295/417 (70%), Gaps = 9/417 (2%)
Query: 42 EARSLQSNQIEAGNSSSYSGALDSQSSVEKQRYIIEMMRHAWNNYKLYAWGKNELKPISK 101
E SL + + + G GA + +++ ++ +MM+HAWN Y YAWG NEL+PIS
Sbjct: 140 ELESLLATK-QTGTVEIIDGAPPDPLTRQRRDFVKKMMKHAWNGYVTYAWGSNELRPISH 198
Query: 102 RAHLSSVFGSGEMGATIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTI 161
H +S+FG G MGAT+VD L TL +MG+ +EF GR W+A++ N N+ S++SVFE TI
Sbjct: 199 TGHSASIFGRGSMGATVVDALSTLKLMGMNEEFERGRKWVAQNLNFNQA-SDISVFEMTI 257
Query: 162 RFVGGLLSCYALTGDTIFRDKAAEVADALLPAFETPTGLPYALINQSTKASRQYHWA-GP 220
RF+GGLLS YAL+G+ +F+ KA E+ D LLPAF TPTG+P+A++N ++ + + WA G
Sbjct: 258 RFLGGLLSAYALSGEEVFKVKAKELGDKLLPAFNTPTGIPWAMVNLASGSGHNWGWASGG 317
Query: 221 NSILSELGTLHLEFSYLSDVTGREVYRNKVDKIREVLYNIEKPGDLYPNFINPRTGQWGQ 280
SIL+E GTLHLEF YLS +TG +VY KV ++REV+ ++KP LYPN++NPRTG WG
Sbjct: 318 CSILAEFGTLHLEFVYLSHITGNQVYAKKVHRVREVVDQVQKPNGLYPNYLNPRTGVWGS 377
Query: 281 RHISLGALGDSFYEYLLKAWLASNRGDEQARTMFDTAMQAALDKML--RVSPSGLAYLAE 338
+H+SLGALGDSFYEYLLK+W+ S + D++AR M+D A++ A+++ML R S L YLAE
Sbjct: 378 QHVSLGALGDSFYEYLLKSWIMSGKMDKKARDMYDKAVE-AIERMLVQRSRKSNLTYLAE 436
Query: 339 LKYGRVIEEKMDHLSCFAGGMFALAATTLENSLSERYMDVARKLTHTCHESYFRSETKLG 398
KYGR +E KMDHL+CF GMFAL A +N + Y+ + +L +TCHE+Y R+ T +G
Sbjct: 437 YKYGR-LEHKMDHLACFTAGMFALGAKESKN--EKHYLQLGAELANTCHEAYKRTATGIG 493
Query: 399 PEAFRFSNAVEARAQKSNEKVYILRPETFESYFIMWRLTKEQKYRDWGWEAVQALEK 455
PE+FRF EA A ++NE+ YILRPE E +F MWR T++ KYRDW WEA Q K
Sbjct: 494 PESFRFEGNAEAVAIRNNERYYILRPEVIEGWFYMWRFTRDSKYRDWAWEAAQVSTK 550
>SB_43428| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0)
Length = 758
Score = 168 bits (408), Expect = 1e-41
Identities = 87/230 (37%), Positives = 132/230 (57%), Gaps = 6/230 (2%)
Query: 178 IFRDKAAEVADALLPAFETPTGLPYALINQSTKASRQYHWAGPNSILSELGTLHLEFSYL 237
+ + + E+ D LLP F + +G+P++ +N T+ W GP+S +SE+ T+ LEF L
Sbjct: 521 MLKTRGVELGDRLLPCFNSQSGIPFSDVNLMTRQVHPPRW-GPDSSVSEVSTIQLEFRDL 579
Query: 238 SDVTGREVYRNKVDKIREVLYNIEKPGDLYPNFINPRTGQWGQ-RHISLGALGDSFYEYL 296
S VTG + Y+ VDK+ L+++ K L P F+N TGQ+ I+LGA GDS+YEYL
Sbjct: 580 SYVTGNDKYKQAVDKVMRHLHSLPKKNGLVPIFVNANTGQFRPGATITLGARGDSYYEYL 639
Query: 297 LKAWLASNRGDEQARTMFDTAMQAALDKMLRVS-PSGLAYLAELKYGRVIEEKMDHLSCF 355
LK WL + + ++ + F +M + R S P+ L Y+ EL +G KMDHL CF
Sbjct: 640 LKQWLQTGKKEDWLKEDFTNSMNGVTSLLARRSHPNKLLYVGELLHGNSFSPKMDHLVCF 699
Query: 356 AGGMFALAATTLENSLSERYMDVARKLTHTCHESYFRSETKLGPEAFRFS 405
G ALAA N L +Y++ A+ + TC++ Y R ++L PE F+
Sbjct: 700 LPGTMALAA---HNGLDPKYLEFAKDMMETCYQMYARMPSRLSPEIAYFN 746
Score = 114 bits (275), Expect = 1e-25
Identities = 56/119 (47%), Positives = 79/119 (66%), Gaps = 6/119 (5%)
Query: 71 KQRYIIEMMRHAWNNYKLYAWGKNELKPISKRAHLSSVFGSGEMGATIVDGLDTLYVMGL 130
+Q+ +IE RHAW YK +AWG +ELKPISK S F +G TI+D LDT+ ++ L
Sbjct: 350 RQKAVIEAFRHAWKGYKQFAWGHDELKPISK--SFSEWF---NIGLTIIDSLDTMLLLNL 404
Query: 131 TDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAEVADA 189
DEFRE RDW+A + ++ + ++++FE TIR +GGLLS Y L+ D IF +KA +A
Sbjct: 405 KDEFREARDWVANSLSFDK-NVDVNLFEVTIRVLGGLLSAYHLSNDDIFLNKAVSTINA 462
>SB_7286| Best HMM Match : Glyco_hydro_47 (HMM E-Value=0.4)
Length = 107
Score = 95.1 bits (226), Expect = 1e-19
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 421 ILRPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRV-EGGYTGLTNVYHQNPQGDDV 479
+LRPET ES +I++RLTK++KY+++GWE QA EKH R+ GGY+ + +V N D
Sbjct: 7 LLRPETVESLYILYRLTKDKKYQEYGWEIFQAFEKHTRIASGGYSSINSVRQLNHGYRDK 66
Query: 480 QQSYFLAETXXXXXXXXXXXXXXXXXEWVFNTEAHPLPI 518
+S+FL ET ++VFNTEAHPLPI
Sbjct: 67 MESFFLGETLKYLFLLFSDLDVVPLDKFVFNTEAHPLPI 105
>SB_23159| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1e-24)
Length = 257
Score = 81.0 bits (191), Expect = 2e-15
Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 26/273 (9%)
Query: 192 PAFETPTGLPYALINQSTKASRQYHWAGPNSILSELGTLHLEFSYLSDVTGREVYRNKVD 251
PAF+TPTG+PY +N + P + S GT +EF +S +TG + + +
Sbjct: 8 PAFDTPTGMPYGTVNLLYGVPKG---ETPITCTSGCGTFVIEFGTISALTGDQRFMDTAM 64
Query: 252 KIREVLYNIEKPGDLYPNFINPRTGQWGQRHISLGALGDSFYEYLLKAWLASNRGDEQAR 311
E L+N + L N I+ +G+W +GA DS++EYLLK + GD +
Sbjct: 65 GALEGLWNSKSEIGLVGNHIDVVSGKWTALDAGIGAGVDSYFEYLLKGAILF--GDPKLM 122
Query: 312 TMFDTAMQAALDKMLRVSPSGLAYLAELKYGRVIEEKMDHLSCFAGGMFALAATTLENSL 371
MF+ + ++ K L+ S + A + G + L F G+ L
Sbjct: 123 EMFEE-LYGSIQKRLKFSDWYV--WANMNKGSITMPIFQSLEAFWPGLQVL--------- 170
Query: 372 SERYMDV-ARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQKSNEKVYILRPETFESY 430
Y D+ A T + S +R L PE F+ ++ V S + Y LRPE ES
Sbjct: 171 ---YGDIGAASRTIEKYHSVWREYGFL-PEFFQIASGVPV----SGREGYPLRPELIESA 222
Query: 431 FIMWRLTKEQKYRDWGWEAVQALEKHCRVEGGY 463
++R TK+ + + G + V+++E + GY
Sbjct: 223 VYLYRATKDPFFLEMGRDIVESIEASAKTLCGY 255
>SB_25089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 63.7 bits (148), Expect = 4e-10
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 33/241 (13%)
Query: 43 ARSLQSNQIEAGNSSSYSGALDSQSSVEKQRYIIEMMRHAWNNYKLYAWGKNELKPIS-- 100
A S QSN+ + + Y + S E R M + +Y YA+ +EL PI
Sbjct: 80 AHSCQSNRSDFDSKYQYFSESERLKSREDAR---RMFYFGYESYMRYAFPHDELDPIHCT 136
Query: 101 ----KRAHLSSVFGS---GEMGATIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSE 153
R + +++ + G+ T+V+ L TL VMG + EF+ + ++ + + S
Sbjct: 137 GRGPDRKNPTNININDVLGDYSLTLVEALGTLAVMGNSTEFKLAVQHVIDNVHFDR-KST 195
Query: 154 LSVFETTIRFVGGLLSCYALTGDTI--FRDK------------AAEVADALLPAF-ETPT 198
+ VFE IR +G LLS + + D + F D A ++A+ L+ AF ++PT
Sbjct: 196 VQVFEANIRVLGSLLSAHMIIKDPLQPFGDMSPDDYDDELLTLAHDLANRLVDAFNKSPT 255
Query: 199 GLPYALIN-QSTKASRQYHWAGPNSILSELGTLHLEFSYLSDVTGREVYRNKVDKIREVL 257
G+PY +N S +A R ++ L+ G+L LEF LS + G + N K +L
Sbjct: 256 GIPYPRVNLTSGEALRD----RSDTCLAGAGSLLLEFGVLSRLLGDPSFENLARKAVNML 311
Query: 258 Y 258
+
Sbjct: 312 W 312
>SB_46857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 39.9 bits (89), Expect = 0.005
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 353 SCFAGGMFALAATTLENSLSERYMDVARKLTHTCHESYFRS 393
+CF GMFAL A +N + Y+ + +L +TCHE+Y R+
Sbjct: 1 ACFTAGMFALGAKESKNE--KHYLQLGAELANTCHEAYKRT 39
>SB_45449| Best HMM Match : Glyco_hydro_47 (HMM E-Value=1.4e-07)
Length = 305
Score = 39.5 bits (88), Expect = 0.007
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 247 RNKVDKIREVLYNIE-KPGDLYPNFINPRTGQWGQRHISLGALGDSFYEYLLKAWL 301
+ K K E L+ + DL IN G W +R +GA DS+YEY LKA++
Sbjct: 55 QEKAKKAMESLWKFRSRASDLVGTVINIHNGDWVRRDSGVGAGIDSYYEYCLKAYI 110
>SB_4966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 30.3 bits (65), Expect = 4.1
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 409 EARAQKSNEKVYILRPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHC--RVEGGYTGL 466
+ +A++ N K L PE + ++T+ ++ WGWE ++ +E V G Y+ +
Sbjct: 469 DEQARQGNSKH--LEPEELDKK----KVTESISWKGWGWEGMETMEGAIPGAVRGWYSEI 522
Query: 467 TNVY-HQNPQGDDVQQSYFLA 486
N Y +Q +G+ +F A
Sbjct: 523 KNDYNYQTGKGNGKAVGHFQA 543
>SB_23022| Best HMM Match : CUB (HMM E-Value=0)
Length = 1307
Score = 29.9 bits (64), Expect = 5.4
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 293 YEYLLKAWLASNRGDEQARTMFDTAMQAALDKMLRVSPSGLAYLAELKYGRV 344
YE L+ A D++ + F A++A L K LR+SP + + EL+ G +
Sbjct: 1024 YEITLEGDCAVVLADDETKKDFRDALKAVLAKALRISPDDIK-VGELECGSI 1074
>SB_59316| Best HMM Match : LRR_1 (HMM E-Value=0)
Length = 680
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 225 SELGTLHLEFSYLSDVTGREVYRNKVDKIREVLYNIE 261
++L +L F+ L++V ++YRNK+ +I VL +E
Sbjct: 413 NQLSSLPASFANLTNVKTLDLYRNKLSEIPRVLLKLE 449
>SB_20006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 29.5 bits (63), Expect = 7.1
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 298 KAWLASNRGDEQARTMFDTAMQAALDKMLRVSPSGLAYLAELKYGRVIEEKMDHLSCFAG 357
++++ RG E + +Q+ L+ ++ P + L L + IE ++ +
Sbjct: 265 ESFVLDQRGQEAILALGYYELQSGLEYKAKIMPYLIDVLNGLPKAKWIESQLPIVKTPVA 324
Query: 358 GMFALAATTLENSLSERYMDVARKLT 383
G FAL +L + L+E+ A K+T
Sbjct: 325 GEFALKFVSLMSCLAEKDKSSAVKIT 350
>SB_1731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 7 LILTAVTVMICMSLPVQTFNAGQGTSVHPASRLARE 42
L+LTAV +IC L ++ G G S+ PA + E
Sbjct: 39 LLLTAVAFIICAFLQIRIQTVGAGPSLPPAGHASLE 74
>SB_7742| Best HMM Match : HEAT (HMM E-Value=9e-23)
Length = 940
Score = 29.1 bits (62), Expect = 9.4
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 399 PEAFRFSNAVEARAQKSNEKVYILRPE-TFESYFIMWRLTKEQKYRDWGWEAVQALEKHC 457
P + N+ EAR + ++++ L E YF++ L + +YR G A+ A+ + C
Sbjct: 388 PPFASWRNSEEARTDRPSQQLRSLNGEWRLMRYFLLTHLCADWRYRHAGLMAISAVGEGC 447
Query: 458 R 458
+
Sbjct: 448 Q 448
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.133 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,858,973
Number of Sequences: 59808
Number of extensions: 653098
Number of successful extensions: 1246
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1218
Number of HSP's gapped (non-prelim): 15
length of query: 539
length of database: 16,821,457
effective HSP length: 86
effective length of query: 453
effective length of database: 11,677,969
effective search space: 5290119957
effective search space used: 5290119957
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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