GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002486-TA|BGIBMGA002486-PA|IPR001382|Glycoside
hydrolase, family 47
         (539 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-5|CAB01415.1|  590|Caenorhabditis elegans Hypothetical pr...   463   e-130
Z73906-1|CAA98114.1|  540|Caenorhabditis elegans Hypothetical pr...   461   e-130
U41272-1|AAA82446.2|  584|Caenorhabditis elegans Hypothetical pr...   287   2e-77
Z68270-2|CAA92567.1|  532|Caenorhabditis elegans Hypothetical pr...   285   7e-77
Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical pr...   147   1e-35
Z81497-2|CAB04078.1|  781|Caenorhabditis elegans Hypothetical pr...   147   2e-35
Z68882-3|CAA93106.2|  568|Caenorhabditis elegans Hypothetical pr...   133   3e-31
Z68115-3|CAA92168.1|  243|Caenorhabditis elegans Hypothetical pr...    30   4.7  
U80441-5|AAB37654.1|  207|Caenorhabditis elegans Atp synthase su...    29   6.3  
U80441-4|AAR25649.1|  228|Caenorhabditis elegans Atp synthase su...    29   6.3  

>Z78012-5|CAB01415.1|  590|Caenorhabditis elegans Hypothetical
           protein C52E4.5 protein.
          Length = 590

 Score =  463 bits (1142), Expect = e-130
 Identities = 233/514 (45%), Positives = 324/514 (63%), Gaps = 6/514 (1%)

Query: 8   ILTAVTVMICMSLPVQTFNAGQGTSVHPASRLAREARSLQSNQIEAGNSSSYSGALDSQS 67
           +++   V I     V++   G+ TS  P      +A    S  +E      +    D ++
Sbjct: 77  VVSQEKVEILRPARVESKPPGEKTSTEPEETGVGKAPIQTSEGLEKLIGKIHYENKDEEN 136

Query: 68  SVEKQRYIIEMMRHAWNNYKLYAWGKNELKPISKRAHLSSVFGSGEMGATIVDGLDTLYV 127
            + +Q+ + EMM HAW  YK Y+WG NEL+P+SK+ +  ++FG  +M ATIVD  DTL++
Sbjct: 137 DLRRQK-VKEMMIHAWEGYKNYSWGANELRPMSKKPNSQNIFGGSQMPATIVDAADTLFI 195

Query: 128 MGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAEVA 187
           M L D+++E RD+I  +F++ +  S LSVFETTIRF+GGLLS YALT ++ + +KA EV 
Sbjct: 196 MDLKDKYKEARDYIENNFSMAKSTSTLSVFETTIRFLGGLLSLYALTQESFYIEKAREVG 255

Query: 188 DALLPAFETPTGLPYALINQSTKASRQYHWA-GPNSILSELGTLHLEFSYLSDVTGREVY 246
           +ALLPAF TP+G+P + ++ ++K +  Y WA G  SILSE+G+LHLEF YLS ++   ++
Sbjct: 256 EALLPAFNTPSGIPKSNLDVASKHASNYGWANGGQSILSEIGSLHLEFLYLSRISNAPIF 315

Query: 247 RNKVDKIREVLYNIEKPGDLYPNFINPRTGQWGQRHISLGALGDSFYEYLLKAWLASNRG 306
             KV K+R+ L   EKP  LY N+INP TG++   H+SLGALGDSFYEYL+K+++ SN  
Sbjct: 316 EKKVKKVRDALEKAEKPNGLYSNYINPDTGKFTGSHMSLGALGDSFYEYLIKSYVQSNYT 375

Query: 307 DEQARTMFDTAMQAALDKMLRVS-PSGLAYLAELKYGRVIEEKMDHLSCFAGGMFALAAT 365
           D QA+ M+     A    M++VS  S L Y  EL  G+  + KM HL+CF  GMFAL A 
Sbjct: 376 DTQAKNMYWDVSDAIQKHMIKVSKQSNLTYTVELNNGQA-QHKMGHLACFVPGMFALQAI 434

Query: 366 TLENSLSE-RYMDVARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQKSNEKVYILRP 424
             +    + R M +A +L  TCHESY RSET +GPE F F+   EA   K +E  YI RP
Sbjct: 435 NEDTEEEKLRIMTLAEELAKTCHESYIRSETHIGPEMFYFNERDEA-TSKHSENGYIQRP 493

Query: 425 ETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRVEGGYTGLTNVYHQNPQGDDVQQSYF 484
           E  E +F +WRLT +  YRDW W+AVQA+EK+CRV+ G+TGL NVY+     +DV QS+F
Sbjct: 494 EVIEGWFYLWRLTGKTMYRDWVWDAVQAIEKYCRVDSGFTGLQNVYNPKAGREDVMQSFF 553

Query: 485 LAETXXXXXXXXXXXXXXXXXEWVFNTEAHPLPI 518
           LAE                  +WVFNTEAHP+P+
Sbjct: 554 LAEFLKYAYLTFADESLISLDKWVFNTEAHPVPV 587


>Z73906-1|CAA98114.1|  540|Caenorhabditis elegans Hypothetical
           protein D2030.1 protein.
          Length = 540

 Score =  461 bits (1137), Expect = e-130
 Identities = 212/458 (46%), Positives = 308/458 (67%), Gaps = 4/458 (0%)

Query: 65  SQSSVEKQRYIIEMMRHAWNNYKLYAWGKNELKPISKRAHLSSVFGSGEMGATIVDGLDT 124
           S  +  ++ ++ +M++ AW+ Y+ YAWG+NEL+P S+  H SS+FG G+ GATI+D +DT
Sbjct: 83  SDDAEGRRIFVKQMIKFAWDGYRKYAWGENELRPNSRSGHSSSIFGYGKTGATIIDAIDT 142

Query: 125 LYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAA 184
           LY++GL +E++E RDWIA+         +LSVFET IRF GGLLS +ALTGD +F  KA 
Sbjct: 143 LYLVGLKEEYKEARDWIADFDFKTSAKGDLSVFETNIRFTGGLLSAFALTGDKMFLKKAE 202

Query: 185 EVADALLPAFETPTGLPYALINQSTKASRQYHWAGPNSILSELGTLHLEFSYLSDVTGRE 244
           +VA  LLPAFETP+G+P +LI+  T  S+ Y WA   +ILSE G++ LEF YLS++TG  
Sbjct: 203 DVATILLPAFETPSGIPNSLIDAQTGRSKTYSWASGKAILSEYGSIQLEFDYLSNLTGNP 262

Query: 245 VYRNKVDKIREVLYNIEKPGDLYPNFIN-PRTGQWGQRHISLGALGDSFYEYLLKAWLAS 303
           V+  K DKIR+VL  +EKP  LYP +I      +WGQ   S+GA+ DS+YEYLLK W+A+
Sbjct: 263 VFAQKADKIRDVLTAMEKPEGLYPIYITMDNPPRWGQHLFSMGAMADSWYEYLLKQWIAT 322

Query: 304 NRGDEQARTMFDTAMQAALDKML-RVSPSGLAYLAELKYGRVIEEKMDHLSCFAGGMFAL 362
            + D++ +  ++ A+ A   +ML +   S L Y A++  G  +E   +HL+CF+GGM  L
Sbjct: 323 GKKDDRTKREYEEAIFAMEKRMLFKSEQSNLWYFAKMN-GNRMEHSFEHLACFSGGMVVL 381

Query: 363 AATTLEN-SLSERYMDVARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQKSNEKVYI 421
            A   +N ++S+ YM + +++ HTCHESY RS T +GPE+F+F+++VEA+ ++  +  YI
Sbjct: 382 HAMNEKNKTISDHYMTLGKEIGHTCHESYARSTTGIGPESFQFTSSVEAKTERRQDSYYI 441

Query: 422 LRPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRVEGGYTGLTNVYHQNPQGDDVQQ 481
           LRPE  E++F +WR TK++KYR W W+ VQ LE++C+   GY+G+ NVY  +P+ DDVQQ
Sbjct: 442 LRPEVVETWFYLWRATKDEKYRQWAWDHVQNLEEYCKGTAGYSGIRNVYESSPEQDDVQQ 501

Query: 482 SYFLAETXXXXXXXXXXXXXXXXXEWVFNTEAHPLPIK 519
           S+  AE                  +WVFNTEAHP  I+
Sbjct: 502 SFLFAELFKYLYLIFSEDNILPLDQWVFNTEAHPFRIR 539


>U41272-1|AAA82446.2|  584|Caenorhabditis elegans Hypothetical
           protein T03G11.4 protein.
          Length = 584

 Score =  287 bits (703), Expect = 2e-77
 Identities = 163/458 (35%), Positives = 252/458 (55%), Gaps = 21/458 (4%)

Query: 70  EKQRYIIEMMRHAWNNYKLYAWGKNELKPISKRAHLSSVFGSGEMGATIVDGLDTLYVMG 129
           ++Q+ +++  +HAW  YK YAWG + LKP+SK    S  F   + G TIVDGLDT  +MG
Sbjct: 136 DRQKAVVKAFQHAWIGYKKYAWGHDTLKPVSKS--YSDWF---DTGLTIVDGLDTAIIMG 190

Query: 130 LTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAEVADA 189
           L DE  E  +WI       E D  ++ FE TIR +GG++S + LTG  +F +K+ ++ D 
Sbjct: 191 LEDEATEATEWIQNTLTF-EKDRMVNFFECTIRVLGGMMSAFHLTGKKMFLEKSVDLGDR 249

Query: 190 LLPAFETPTGLPYALINQSTKASRQYHWAGPNSILSELGTLHLEFSYLSDVTGREVYRNK 249
           LL AF++P+ +PY+ +N   + +    W G +S LSE+ T+ LE+  LS  +G   Y + 
Sbjct: 250 LLSAFKSPSPIPYSDVNLLKRTATNPQW-GADSSLSEVTTVQLEYRALSRASGNSTYEDL 308

Query: 250 VDKIREVLYNI--EKPGDLYPNFINPRTGQWGQ-RHISLGALGDSFYEYLLKAWLASNRG 306
              + + ++ I  E    L   FIN  TG + +   I+ GA  DSFYEYL K W+ + + 
Sbjct: 309 TFNVFKHIHKIGCETHEGLCGMFINANTGNFKKDSTITFGARSDSFYEYLFKQWIQTGKT 368

Query: 307 DEQARTMFDTAMQAALDKMLRVS-PSGLAYLAELKYGRVIEEKMDHLSCFAGGMFALAAT 365
            +  +  +  AM+A    + R S P+ + ++ EL  G+    KMDHL CF  G  +  + 
Sbjct: 369 IDWLKEDYGKAMKAMEKYLYRNSKPNKMFFIGELLSGQTYSPKMDHLVCFIAGTLSQGS- 427

Query: 366 TLENSLSERYMDVARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQ---KSNEKVYIL 422
             ++    +++D+A K+  TCH  Y  + T LGPE   F N +  +     K  +   +L
Sbjct: 428 --QHGFPRKHLDMAEKIGETCHNMY-DNPTGLGPEIAHF-NMIPGKEDLYVKPLDAHCLL 483

Query: 423 RPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRV-EGGYTGLTNVYHQNPQGDDVQQ 481
           RPE  E++F ++R T ++KY++WGW A QA+EK+ R+  GGY+ ++NV   N +  D  +
Sbjct: 484 RPEAIEAWFYLYRFTGDKKYQEWGWSAFQAIEKYARIPTGGYSSISNVKQINVRFRDSME 543

Query: 482 SYFLAETXXXXXXXXXXXXXXX-XXEWVFNTEAHPLPI 518
           S+ L ET                  +WVF TE HPLPI
Sbjct: 544 SFLLGETFKYLYLLLGDDQTVLPLDKWVFTTEGHPLPI 581


>Z68270-2|CAA92567.1|  532|Caenorhabditis elegans Hypothetical
           protein ZC410.3 protein.
          Length = 532

 Score =  285 bits (698), Expect = 7e-77
 Identities = 170/463 (36%), Positives = 265/463 (57%), Gaps = 27/463 (5%)

Query: 70  EKQRYIIEMMRHAWNNYKLYAWGKNELKPISKRAHLSSVFGSGEMGATIVDGLDTLYVMG 129
           E+Q+ I+   +HAW+ YK YAWG +EL+P+SKR      FG   +G TI+D LDT  +MG
Sbjct: 81  ERQKAIVRAFQHAWSGYKKYAWGHDELRPVSKR--FDDSFG---LGLTIIDSLDTAIIMG 135

Query: 130 LTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGDTIFRDKAAEVADA 189
           L +E R+G +WI E+ N++   S ++VFETTIR +GGLLS Y LTG+    +KA ++ D 
Sbjct: 136 LEEETRDGVEWIRENLNVSPARS-VNVFETTIRVLGGLLSGYHLTGEEALLEKATQLGDN 194

Query: 190 LLPAFETPTGLPYALINQSTKASRQYHWAGPN---SILSELGTLHLEFSYLSDVTGREVY 246
           L+ AF   +    +LI +S       +   PN   S L+E  TL LEF  L+ +TG + Y
Sbjct: 195 LIKAFTKSS----SLIPKSDVNLDNGNACSPNRDLSSLAEATTLQLEFRDLTALTGDQKY 250

Query: 247 RNKVDKIREVLYNI--EKPGDLYPNFINPRTGQWGQRHISLGALGDSFYEYLLKAWLASN 304
            +      E ++N+  +K   L P +I+ + G++ +  I+LGA  DS+YEYL+K WL + 
Sbjct: 251 EDVAFGASEHVHNVGCKKMDGLCPFYIDGK-GEFKKSSITLGARADSYYEYLIKQWLQTK 309

Query: 305 RGDEQARTMFDTAMQAALDKMLRVS-PSGLAYLAELKYGRVIEEKMDHLSCFAGGMFALA 363
           +  +  R  F  ++ A    + R S P+ + +L E+        KMDHL CF  G   L+
Sbjct: 310 KSIDWLRDDFIQSIAAMKKHLYRQSQPNSIWFLGEITELAQFYPKMDHLVCFLSGSLVLS 369

Query: 364 ATTLENSLSERYMDVARKLTHTCHESYFRSETKLGPEAFRF-----SNAVEARAQKSNEK 418
                +  +E ++++A+ + + CH+ Y  + T LGPE   F     S+  +A     N  
Sbjct: 370 HLNGLDHDNE-HLEMAKNIGNVCHKMY-ENPTGLGPEIIHFNMEDSSDMTQADTYVKNLD 427

Query: 419 VY-ILRPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRVE-GGYTGLTNVYHQNPQG 476
            + +LRPE  E++F ++R+TK++KY++WGW+A +++EK+ +VE GGY+ + NV  +  + 
Sbjct: 428 AHSLLRPEAIEAWFYLYRVTKDKKYQEWGWKAFESIEKYAKVETGGYSSIDNVLRKKIKR 487

Query: 477 DDVQQSYFLAETXXXXXXXXXXXXXXXXXE-WVFNTEAHPLPI 518
            D  +S+FLAET                 + WV NTEAHPLPI
Sbjct: 488 RDKMESFFLAETLKYLYLLMADDQEILPLDRWVLNTEAHPLPI 530


>Z47073-1|CAA87371.3|  931|Caenorhabditis elegans Hypothetical
           protein ZC506.1 protein.
          Length = 931

 Score =  147 bits (357), Expect = 1e-35
 Identities = 140/490 (28%), Positives = 218/490 (44%), Gaps = 64/490 (13%)

Query: 58  SYSGALDSQSSVEKQRYIIEMMRHAWNNYKLYAWGKNELKPISKRAHLSSVFGS------ 111
           S+   LD +  ++K+ Y  +M  H +N+Y  YA+  +EL P+S +  +  V  S      
Sbjct: 19  SHGEELDKKK-LQKEAY--DMFMHGYNSYMNYAFPADELMPLSCKGRIRGVTPSRGDVDD 75

Query: 112 --GEMGATIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLS 169
             G    T++D LDTL VM   DEF +  D + +H   +  D  +SVFET IR +GGL+S
Sbjct: 76  VLGNFSVTLLDSLDTLVVMNELDEFEKAIDLVIKHVRFDS-DHVVSVFETNIRVLGGLIS 134

Query: 170 CYAL-------------TGDTIFRDKAAEVADALLPAFETPTGLPYALINQSTKASRQYH 216
            + L             T D      A EV + LLPAF T +GLP++ IN   K   Q H
Sbjct: 135 AHVLAELVKEKYPNRLTTYDNQLLKMATEVGNRLLPAFNTTSGLPFSRIN--LKHGMQDH 192

Query: 217 WAGPNSILSELG-TLHLEFSYLSDVTGREVYRNKVDKIREVLYNIE-KPGDLYPNFINPR 274
                   +  G T+ LEF+ L+ +TG  +Y  K  K  + L+    +  DL    +N  
Sbjct: 193 LKRQKDTCTACGGTMILEFAALTSLTGDPIYEKKARKAMDFLWQQRHRSSDLMGTVLNVH 252

Query: 275 TGQWGQRHISLGALGDSFYEYLLKAWLASNRGDEQARTMFDTAMQAALDKMLRVSPSGLA 334
           +G W +R   +GA  DS+YEY LKA++    GDE     F+   +A    + R    G  
Sbjct: 253 SGDWTRRESGIGAGIDSYYEYTLKAYIL--LGDESYLDRFNKHYEA----IKRYINKGPI 306

Query: 335 YLAELKYGRVIEEK--MDHLSCFAGGMFALAATTLENSLSERYMDVARKLTHTCHESYFR 392
           ++    +   +  +  MD L  F  G+  L              DV   +    HE  F+
Sbjct: 307 FVDVHMHRPTVATRGFMDSLLAFWPGLQVLKG------------DVKEAI--EMHEMLFQ 352

Query: 393 --SETKLGPEAFRFSNAVEARAQKSNEKVYILRPETFESYFIMWRLTKEQKYRDWGWEAV 450
              + K  PEAF     V       +   + +RPE  ES + ++R TK+  Y     + +
Sbjct: 353 VIQKHKFLPEAFTHDFQV-------HWAEHPIRPEFVESTYFLYRATKDPHYLHVAKQIM 405

Query: 451 QALEKHCRVEGGYTGLTNVYHQNPQGDDVQQSYFLAETXXXXXXXXX--XXXXXXXXEWV 508
            ++ K+ +V  G+  L ++  +    +D  +S+ L+ET                    +V
Sbjct: 406 DSINKYVKVPCGFAALKDI--RTMVKEDQMESFVLSETFKYLYMIFTDPEDLMFDPDHYV 463

Query: 509 FNTEAHPLPI 518
             TEAH LP+
Sbjct: 464 LTTEAHFLPL 473


>Z81497-2|CAB04078.1|  781|Caenorhabditis elegans Hypothetical
           protein F10C2.5 protein.
          Length = 781

 Score =  147 bits (356), Expect = 2e-35
 Identities = 130/428 (30%), Positives = 199/428 (46%), Gaps = 49/428 (11%)

Query: 77  EMMRHAWNNYKLYAWGKNELKPISKRAHLSSVFGSGEMGATIVDGLDTLYVMGLTDEFRE 136
           +M  HA+N Y  +A+  +ELKPI+        +GS  +  +++D LDTL VMG T EFR 
Sbjct: 48  KMFYHAYNGYLDHAFPLDELKPITCVGQ--DTWGSFSL--SLIDALDTLLVMGNTTEFRR 103

Query: 137 GRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTG--------------DTIFRDK 182
               + E    ++ +  +SVFET IR VGGL+S + L G              D+     
Sbjct: 104 AVSLVLEKAR-DDANVNVSVFETNIRVVGGLISAHMLAGRHKDLVVDWEGYPCDSPLLKL 162

Query: 183 AAEVADALLPAFETPTGLPYALINQSTKASRQYHWAGPNSILSELGTLHLEFSYLSDVTG 242
           A ++AD L+PAF T TG+PY  +N      +      P +  + +GT  +EF  LS +TG
Sbjct: 163 AVKMADRLMPAFNTETGMPYGTVNLKYGVHKD---ETPITCTAGVGTFLIEFGTLSRLTG 219

Query: 243 REVYRNKVDKIREVLYNIEKPGDLYPNFINPRTGQWGQRHISLGALGDSFYEYLLK-AWL 301
            + Y     K  + L++   P  L  N IN +TGQW      +GA  DS++EYL K A+L
Sbjct: 220 DDKYEKVALKALDALWSTRSPIGLVGNHINVQTGQWTATDSGIGAGVDSYFEYLAKGAYL 279

Query: 302 ASNRGDEQARTMFDTAMQAALDKMLRVSPSGLAYLAELKYGRVIEEKMDHLSCFAGGMFA 361
              R     +   + A   +++K +R       +++  K G V       L  F  G   
Sbjct: 280 F--RRPSLMKQFHEHA--TSINKHVR-KGEWFMWVSMAK-GSVSLPIFQSLEAFWPGTLT 333

Query: 362 LAATTLENS-LSERYMDVARKLTHTCHESYFRSETKLGPEAFRFSNAVEARAQKSNEKVY 420
           +     + S +   Y +V RK                 PE +   N  E   +K     +
Sbjct: 334 MVGDVQDASRIMLTYSEVIRKY-------------GFPPEFYNIHN--EEPGEK--RAAF 376

Query: 421 ILRPETFESYFIMWRLTKEQKYRDWGWEAVQALEKHCRVEGGYTGLTNVYHQNPQGDDVQ 480
            LRPE  ES   ++R TK++ + + G E + A+E   R + GY  + NV   +   +D  
Sbjct: 377 PLRPEMVESLMYLYRATKDETWLELGAEMIDAIESSARTKCGYATINNVKEHSI--EDRM 434

Query: 481 QSYFLAET 488
           +S+FLAET
Sbjct: 435 ESFFLAET 442


>Z68882-3|CAA93106.2|  568|Caenorhabditis elegans Hypothetical
           protein C47E12.3 protein.
          Length = 568

 Score =  133 bits (321), Expect = 3e-31
 Identities = 138/502 (27%), Positives = 228/502 (45%), Gaps = 62/502 (12%)

Query: 63  LDSQSSVEKQRYIIEMMRHAWNNYKLYAWGKNELKPISKRA-----------HLSSVFGS 111
           +D Q  + K R   EM +  W+NY  +A+  +EL PI  R            +++ V G 
Sbjct: 42  VDLQYGLAKTR---EMFQFGWDNYMEHAFPADELDPIHCRGRGHDHDNPDNINVNDVLGD 98

Query: 112 GEMGATIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCY 171
             +G  ++D LD+L V G  DEF+   + + +  +  E ++ + VFE+TIR +GGLL+ +
Sbjct: 99  YSLG--LIDTLDSLVVFGDADEFKRAVNLVIKTVSF-EKNTTVQVFESTIRVMGGLLAAH 155

Query: 172 ALTGDTIFR--------------DKAAEVADALLPAFE-TPTGLPYALINQSTKASRQYH 216
            +  D   R                A ++A  LLPAF+ T TG+PY  IN          
Sbjct: 156 MIAADKTNRFGPFYMSDYGGELLTLAHDLAGRLLPAFDGTATGIPYTRINLQKGI---LP 212

Query: 217 WAGPNSILSELGTLHLEFSYLSDVTGREVYRNKVDKIREVLYNI-EKPGDLYPNFINPRT 275
               ++  S  G+L LEF  LS + G + Y     ++ E L+N+  +   L+ N I+ +T
Sbjct: 213 GTTNSTCTSGAGSLLLEFGVLSKLLGDDTYERLARRVNEKLWNLRNEVTGLHGNLIDIQT 272

Query: 276 GQWGQRHISLGALGDSFYEYLLKAWLASNRGDEQARTMFDTAMQAALDKMLRVSPSGLAY 335
           G+W      LGA  DSFYEY+LK+++    G+++   M++ +       M R    G + 
Sbjct: 273 GEWLGHLAGLGAGIDSFYEYMLKSYILF--GNQRDLDMYNESFARITTYMRR----GRSR 326

Query: 336 LAELKYGRVIEEKMDHLSCFAGGMFALAATTLENSLSERYMDVARKLTHTCHES-YFRSE 394
            + L+    I   +D      G        +L+ S +   +         CH + Y+   
Sbjct: 327 CSSLEGDIPIYVNVDSRD---GSTSNTWIDSLQASFAGVLVLAGEVDEAVCHHALYYAIW 383

Query: 395 TKLG--PEAFRFSNAVEARAQKSNEKVYILRPETFESYFIMWRLTKEQKYRDWGWEAVQA 452
            K G  PE F +      + Q  +   Y LRPE  ES ++++  TK   Y+  G E + +
Sbjct: 384 KKYGVLPERFNW------QLQAPDVSFYPLRPEFVESTYLLYTATKNPFYQHVGLEILDS 437

Query: 453 LEKHCRVEGGYTGLTNVYHQNPQGDDVQQSYFLAETXXXXXXXXXXXXXXXXXEW---VF 509
           LE   RV+ G+  + +V   +   +D  +S+FL+ET                 +    +F
Sbjct: 438 LETITRVKCGFATVHDVI--DGSLEDRMESFFLSETLKYLYLLFDVDHPINKEQQESVLF 495

Query: 510 NTEAHPLPIKGKNPLYRMASTP 531
           +TE H  PI   +PL+ +  TP
Sbjct: 496 STEGHIFPI---SPLFNLPPTP 514


>Z68115-3|CAA92168.1|  243|Caenorhabditis elegans Hypothetical
           protein F19H6.4 protein.
          Length = 243

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 8/95 (8%)

Query: 159 TTIRFVGGLLSCYAL----TGDTIFRDKAAEVADALLPAFETPTGLPYALINQSTKASRQ 214
           TT + VG L+ C  +      DTI R+  A+        ++ PTG  Y  I+    A   
Sbjct: 132 TTRKLVGSLMYCTGMYINHKSDTILRELRADGGTG----YKIPTGFLYEYISCPNYAGEI 187

Query: 215 YHWAGPNSILSELGTLHLEFSYLSDVTGREVYRNK 249
             W G + +   L  L      ++++  R V  +K
Sbjct: 188 MEWIGYSILAWNLPALAFAIFTIANIGPRAVAHHK 222


>U80441-5|AAB37654.1|  207|Caenorhabditis elegans Atp synthase
           subunit protein 3,isoform a protein.
          Length = 207

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 117 TIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGD 176
           T ++ + T   +GLT E       +AE+  +N+++S +S FE+ +R   G L     + +
Sbjct: 84  TAIEAISTK--LGLTKETGNFLGLLAENGRLNKLESVVSSFESIMRAHRGELFVQVTSAE 141

Query: 177 TIFRDKAAEVADAL 190
            +       ++DAL
Sbjct: 142 ELSSSNQKALSDAL 155


>U80441-4|AAR25649.1|  228|Caenorhabditis elegans Atp synthase
           subunit protein 3,isoform b protein.
          Length = 228

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 117 TIVDGLDTLYVMGLTDEFREGRDWIAEHFNINEIDSELSVFETTIRFVGGLLSCYALTGD 176
           T ++ + T   +GLT E       +AE+  +N+++S +S FE+ +R   G L     + +
Sbjct: 105 TAIEAISTK--LGLTKETGNFLGLLAENGRLNKLESVVSSFESIMRAHRGELFVQVTSAE 162

Query: 177 TIFRDKAAEVADAL 190
            +       ++DAL
Sbjct: 163 ELSSSNQKALSDAL 176


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.318    0.133    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,527,904
Number of Sequences: 27539
Number of extensions: 497776
Number of successful extensions: 1133
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1083
Number of HSP's gapped (non-prelim): 15
length of query: 539
length of database: 12,573,161
effective HSP length: 85
effective length of query: 454
effective length of database: 10,232,346
effective search space: 4645485084
effective search space used: 4645485084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)