Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002485-TA|BGIBMGA002485-PA|undefined
(207 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_05_0004 + 7717748-7717798,7718107-7718317,7719424-7720079,772... 33 0.22
01_07_0016 - 40476014-40476333,40476598-40476740,40476945-404790... 32 0.29
10_08_0006 - 14035990-14036135,14036246-14036339,14036845-140371... 30 1.2
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 30 1.2
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 30 1.5
04_03_0969 + 21331989-21332674,21333090-21333194,21333269-213333... 29 2.0
02_05_0496 - 29499959-29500653,29501039-29501093 29 2.0
12_01_0969 - 9765114-9765664,9767963-9768512,9769507-9769561,976... 29 2.7
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 29 2.7
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 29 2.7
10_01_0171 + 1917520-1918056,1919201-1919336,1921873-1922060,192... 29 3.6
09_06_0311 + 22218219-22218421,22219157-22219422,22219881-222200... 29 3.6
08_02_1087 + 24245535-24246350 29 3.6
01_06_0353 - 28647452-28647477,28647568-28649134 29 3.6
09_04_0110 + 14720800-14720932,14721015-14721144,14721231-147219... 28 6.2
08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766 28 6.2
07_03_1363 - 26022333-26023225,26023319-26023451 28 6.2
05_04_0086 - 17797792-17797810,17798049-17798234,17798319-177984... 28 6.2
03_05_0478 - 24712157-24712177,24712206-24712260,24712377-247124... 28 6.2
10_08_1056 - 22591847-22591936,22592968-22593052,22593135-22593430 27 8.2
09_06_0220 + 21644642-21647293 27 8.2
05_03_0468 + 14376926-14377183,14377534-14377710,14377802-143778... 27 8.2
02_02_0322 - 8938101-8938149,8938235-8938458,8938545-8938605,893... 27 8.2
>10_05_0004 +
7717748-7717798,7718107-7718317,7719424-7720079,
7721296-7721469,7721562-7721678,7722820-7722999,
7723244-7723290,7724068-7724401
Length = 589
Score = 32.7 bits (71), Expect = 0.22
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 103 EGDDPHIVEDRNRLKAKIDEDMGMKVLERPQF-DVAPSVSSSRGPSKPPVD-AIE--EPA 158
+G+ I ED ++LK +DE + L+R + ++ S+ SS S D AIE E
Sbjct: 479 QGEMTVICEDVSQLKQIVDERLSFCKLQRSKMSSLSSSLQSSLHKSGSSADRAIEAVEST 538
Query: 159 VRNFAAKDASPA-GPKPDGSNRYVAVAIGPN-ADPD 192
++ A+ A+ A G P+GS R + V G AD D
Sbjct: 539 DKHTVAEGANAAVGDDPNGSKRIIHVWNGSGMADKD 574
>01_07_0016 - 40476014-40476333,40476598-40476740,40476945-40479099,
40479205-40480047,40480176-40480269,40480356-40481207,
40481367-40481437,40481750-40481821,40481977-40482019
Length = 1530
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 95 VGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPS-KPPVDA 153
+ + + G D H +E A D+ + + ++PS +S GPS + V +
Sbjct: 1413 IRLKKAGHASSDDHKLESGGVTSAAQPVDIPVSTNKEAGSFISPSGTSVDGPSFREMVKS 1472
Query: 154 IEEPAVRNFAAKDASPAGPKPDGSNR 179
++PA++ + A +++ GP G+ +
Sbjct: 1473 TKKPALQQYDASESADGGPGGKGAKK 1498
>10_08_0006 -
14035990-14036135,14036246-14036339,14036845-14037176,
14038040-14038094,14038682-14038750,14038940-14039039,
14039212-14039255,14039705-14039873,14040262-14040333,
14040439-14040519,14040586-14040650,14040796-14041260
Length = 563
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 121 DEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSN 178
D+D + + D AP SS R P KP E V AA A+ A PKPD ++
Sbjct: 70 DDDDSLHTFTAARLDGAPPSSSGR-PPKP-----ESSTVSAAAAAAAAAAAPKPDSAS 121
>02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Query: 128 VLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGP 187
+LER V P V SS PP +A + A+D P + + P
Sbjct: 1788 MLERQSISV-PLVQSSLSSQNPPAEAEPASTLSRETARDVQPERQQSASVLETSLQRMHP 1846
Query: 188 NADPDQKQKLETV 200
+ D K +LETV
Sbjct: 1847 DDDSQTKHQLETV 1859
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 110 VEDRNRLKAKIDEDMGMK---VLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRN 161
+ + + K+ E MG V ++ D P + ++ GP+ PVD ++ +V++
Sbjct: 1081 INEARKKHRKVGEIMGSSSKVVSDKSNDDALPDICTTSGPALQPVDVTQQKSVQS 1135
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 132 PQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGP 187
P F ++PS S PS P A R + +G P+ S R+ A +GP
Sbjct: 71 PSF-LSPSPSDDPAPSPSPSSAAAVDLRRRSPYSEVETSGAVPEPSRRFTADLVGP 125
>04_03_0969 +
21331989-21332674,21333090-21333194,21333269-21333391,
21333458-21333628,21333710-21333839,21333926-21334135,
21334700-21334855
Length = 526
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 132 PQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADP 191
P +A +V+ + P KPP D E P+ A+ A P V A P P
Sbjct: 58 PVLHLATAVAPPKHPGKPPKDIQEVPS-------RAAAAAAAPKAQPAQVIQAPPPQPPP 110
Query: 192 DQKQKLETVKE 202
+ ++ET KE
Sbjct: 111 SESIQIETGKE 121
>02_05_0496 - 29499959-29500653,29501039-29501093
Length = 249
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 131 RPQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFA-AKDASPAGPKPD--GSNRYVA-VAIG 186
+PQ P+ GP A +P A+DA PA PKP G N+ V G
Sbjct: 78 QPQTPPPPAQQQQHGPEHEHHQAQPQPQQEPPPPAQDAPPAEPKPPKRGKNKKSGRVRFG 137
Query: 187 PNADPDQKQK 196
P P ++Q+
Sbjct: 138 PEPPPPEQQQ 147
>12_01_0969 -
9765114-9765664,9767963-9768512,9769507-9769561,
9769918-9769980,9770547-9771325
Length = 665
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 148 KPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYV 181
KPP P VR +A+ ASP P P ++ YV
Sbjct: 16 KPPPIRPRPPPVRPYASSAASPPPPPPPPASAYV 49
>07_03_0471 +
18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 137 APSVSSSRGPSKPPVDAIEEP--AVRNFAAKDASPAGPKPDGSNRYVAVA 184
+PS SS P PP DA ++P A R AS + P P S + A A
Sbjct: 75 SPSSSSWPPPPPPPPDASQDPDLAPREATTPPASSSSPSPRASAKARASA 124
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 138 PSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPN 188
P V S PS PP ++E + F + +P+ P P + A P+
Sbjct: 41 PVVGSPPPPSPPPPPPLDEETLAQFPSPPTNPSPPPPPPLDADAAAEAAPS 91
>10_01_0171 +
1917520-1918056,1919201-1919336,1921873-1922060,
1922491-1922694,1923913-1924425
Length = 525
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 20 ISRRSFRIREKYLIVSVLL-TFGIVWLGAL---FYLPEFK 55
I RR FR R+ Y+IV ++L GI+ +GAL F P FK
Sbjct: 253 IFRRDFRGRKNYIIVILILRRSGIICIGALKEIFKPPIFK 292
>09_06_0311 + 22218219-22218421,22219157-22219422,22219881-22220050,
22220149-22220365,22220798-22221021,22221559-22221738,
22221875-22222013,22222107-22222255,22223394-22223505,
22223998-22224506,22224661-22224784,22224904-22225178,
22225507-22225626,22225707-22225769,22225861-22226052,
22226381-22226440,22226535-22226738,22226926-22227051,
22227093-22227254,22227357-22227476,22227665-22227820,
22227895-22227957,22228041-22228168,22228524-22228920,
22229442-22229544,22229646-22229776,22230096-22230167,
22230472-22230553,22231083-22231190,22231288-22231429,
22231659-22231698,22231746-22231876,22232215-22232301,
22232395-22232605,22232687-22232741,22232836-22232927,
22233011-22233071,22233361-22233719
Length = 2010
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 126 MKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKP 174
MK+LE+ AP ++ P+ P A+ +PA + A + SP P+P
Sbjct: 1935 MKLLEKKPIREAPPRHATPAPASAPAAAMADPA--SPATGELSPRTPQP 1981
>08_02_1087 + 24245535-24246350
Length = 271
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Query: 109 IVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIE---EPAVRNFAAK 165
+ + +++ K D G+ ++ +D P + PV+ E PA
Sbjct: 147 VQNEGDKVTIKTDASDGVARIKDTVYDKDPIAIYAVDTVLEPVELFEPAESPAPAPAPVA 206
Query: 166 DASPAGPKPDGSNRYVAVAIGPNAD--PDQKQKLETVKED 203
DA A S+R+VA A GP D P Q+ + K D
Sbjct: 207 DAPKASKSKKASHRHVADAPGPAGDDAPPADQRKSSKKND 246
>01_06_0353 - 28647452-28647477,28647568-28649134
Length = 530
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 157 PAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETV 200
PA N + A GP D S YV P DPD++ L+ V
Sbjct: 57 PAEENIREEAARLRGPGNDFSAWYVPFPPTPEDDPDERYSLDEV 100
>09_04_0110 +
14720800-14720932,14721015-14721144,14721231-14721925,
14722133-14722140
Length = 321
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 18 PSISRRSFRIREKYLIVSVLLTFGIVWLGALFYLPE 53
P I R +F +E+ LIV + G W YLPE
Sbjct: 63 PGIKRGNFTEQEEKLIVHLQALLGNRWAAIASYLPE 98
>08_02_0792 +
21233578-21233710,21233807-21233936,21234097-21234766
Length = 310
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 18 PSISRRSFRIREKYLIVSVLLTFGIVWLGALFYLPE 53
P I R +F +E+ LIV + G W YLPE
Sbjct: 63 PGIKRGNFTDQEEKLIVHLQALLGNRWAAIASYLPE 98
>07_03_1363 - 26022333-26023225,26023319-26023451
Length = 341
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 18 PSISRRSFRIREKYLIVSVLLTFGIVWLGALFYLPE 53
P I R +F +E+ LIV + G W YLPE
Sbjct: 63 PGIKRGNFTDQEEKLIVHLQALLGNRWAAIASYLPE 98
>05_04_0086 -
17797792-17797810,17798049-17798234,17798319-17798407,
17798518-17798712,17799364-17799525,17799609-17799681,
17799929-17799996,17800086-17800133,17800223-17800288,
17800418-17800488,17800825-17800891
Length = 347
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 95 VGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRG 145
+GI H E IV N+L+ K+D D + ++P V SS G
Sbjct: 294 LGISMHAEASGSCRIVTGDNKLQYKMDSDGNIVFSKQPGLSVDQLHSSQHG 344
>03_05_0478 -
24712157-24712177,24712206-24712260,24712377-24712473,
24712558-24713302,24713822-24714189,24714279-24714419,
24715480-24715849
Length = 598
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 136 VAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSN 178
V P SSS P++PP A A AA A+ A + S+
Sbjct: 24 VTPDASSSAPPAEPPAAAAAAVAAAAAAASSAAAAAAQAQASS 66
>10_08_1056 - 22591847-22591936,22592968-22593052,22593135-22593430
Length = 156
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 146 PSKPPVDAIEEPAVRNFAAKDASPAGPKPDGS 177
PS PP + VR+FAAKD S A P S
Sbjct: 57 PSSPPPMQWQTQQVRHFAAKDRSRAPRTPTTS 88
>09_06_0220 + 21644642-21647293
Length = 883
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 81 PPPLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDED 123
P P + D +FP +V G EG + ++VE + + + E+
Sbjct: 377 PEPEEKVDDSEFPEFDVVDKGVEGQEENVVEAKGAAEEEAKEE 419
>05_03_0468 +
14376926-14377183,14377534-14377710,14377802-14377867,
14378009-14378134,14378499-14378678,14379015-14379179,
14380185-14380538
Length = 441
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 143 SRGPSKPPVDAIEEPAVRNFAA-KDASPAGPKPDGSNRYVAVA 184
S GPS PP D++ A+R AA +DAS S+ A A
Sbjct: 26 SVGPSSPPQDSLAAQAMRASAAHRDASSLSSAYSSSSASAAAA 68
>02_02_0322 -
8938101-8938149,8938235-8938458,8938545-8938605,
8938724-8940761,8940797-8940908,8942037-8942047,
8942293-8942443
Length = 881
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 86 QNDVGDFPVVGIVR-HGEEGDDPHIVEDRNRLKAKIDEDMGMK 127
QN V D VV I+ +E DDP ++DR + +D +K
Sbjct: 674 QNTVKDVSVVNIMDLSDDEYDDPDYMQDRGDVAQPVDHPRAVK 716
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.138 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,668,734
Number of Sequences: 37544
Number of extensions: 295463
Number of successful extensions: 945
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 930
Number of HSP's gapped (non-prelim): 25
length of query: 207
length of database: 14,793,348
effective HSP length: 79
effective length of query: 128
effective length of database: 11,827,372
effective search space: 1513903616
effective search space used: 1513903616
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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