Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002485-TA|BGIBMGA002485-PA|undefined
(207 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39877| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38) 33 0.13
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 31 0.68
SB_54481| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_44458| Best HMM Match : Filament (HMM E-Value=1) 30 1.2
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_44827| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_41291| Best HMM Match : Piwi (HMM E-Value=0) 29 3.6
SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 6.4
SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0) 28 6.4
SB_38020| Best HMM Match : Fer2_BFD (HMM E-Value=5.3) 27 8.4
SB_19519| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 27 8.4
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_7884| Best HMM Match : rve (HMM E-Value=2.1e-15) 27 8.4
>SB_39877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 555
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 4 ILPTYQRFVNGVPVPSISRRSFRIREKYLIVSVLLTFGIVWLGALFYLPEFKXXXXXXXX 63
ILPT+ RF +P I R R+REKY++V + + F ++ GA FY+P+ +
Sbjct: 3 ILPTH-RFQT---IP-IQRSGLRVREKYVLVLIFIAFLMLCFGAFFYVPDLR----DRTY 53
Query: 64 XXXXXKRIQKAGPEL--LMPP 82
KR AG E+ L PP
Sbjct: 54 LEDAYKRFVGAGGEIFPLKPP 74
>SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38)
Length = 234
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 117 KAKIDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDAS--PAGPK 173
KAK K ++P +P ++++ PSK P A ++PA + AAK A+ PA K
Sbjct: 146 KAKKPASKKPKAAKKPAAKKSPKKAAAKKPSKSPKKAAKKPAAKKPAAKKAAKKPAAKK 204
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 31.1 bits (67), Expect = 0.68
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 131 RPQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGP 172
RPQ AP + P +PP +++P ++ FA P+ P
Sbjct: 888 RPQQPPAPMPPQQQSPYQPPAPTMQQPQLQAFAPFSPQPSQP 929
>SB_54481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 79 LMPPPLAQNDVGDFPVVGIVRHGEEGDDPHIV-EDRNRLKAKIDEDM---GMKVLERPQF 134
L+PP +++N GDF ++ E+G V +N + +IDED G K+ + +
Sbjct: 44 LLPPLVSKNIQGDFAKKLVMSRMEDGKKKKKVWRPKNSVVVRIDEDFEIKGEKMCKNAKI 103
Query: 135 DVAPSVSSSRGPSKPPVDAIEEP 157
+ + SR P + + I P
Sbjct: 104 PESVKNNPSRDPEEETMRMIRIP 126
>SB_44458| Best HMM Match : Filament (HMM E-Value=1)
Length = 748
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 76 PELLMPPPLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMK 127
P++ +PPPL D+GD P+V ++ I E R L+ +E + ++
Sbjct: 534 PKVPVPPPLQMPDIGDAPLVKDTSSAKDRKQKVIEELRGELRRAKNERVDLE 585
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 139 SVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLE 198
S+ + R +K + + N ++ + A P R + V +GP+A+ ++ K+
Sbjct: 4706 SLENGRAGAKKVMVILTNQQSSNLPSELKAAAIPLDRAEIRIITVPLGPDANTNELAKIT 4765
Query: 199 TVKEDIL 205
VK+D+L
Sbjct: 4766 PVKKDLL 4772
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 140 VSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLET 199
++++ KP + + E AV FA+ + P K + VA+G A PD+ + T
Sbjct: 6416 LTANNTAGKPDIVKVLEKAVLMFASASSRPMAKKV---LVVIPVAVGSKAVPDELTTITT 6472
Query: 200 VKEDILST 207
K +++ T
Sbjct: 6473 DKGNVIVT 6480
>SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 93 PVVG-IVRHGEEGDDPHIVEDRNRLKAKIDEDMG-MKVLERPQF 134
P++G + H E P +VE+R RL+ I + M ++ L+RP++
Sbjct: 103 PLLGKLPTHNMETTSPPVVEERQRLRVAIIDGMAEVQSLDRPEW 146
>SB_44827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 5 LPTYQRFVNGVPVPSISRRSFRIREKYLIVSVLLTFGI 42
+ T ++ V +PV ISRR + RE + +L FG+
Sbjct: 31 ISTLRKVVFKLPVLRISRRFWNARENFKFAEILFAFGL 68
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 126 MKVLERPQF---DVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPK--PDGSNRY 180
+K ERP+ D A + P+KP + E+P + K PK P S+
Sbjct: 384 VKPRERPRRTSRDEAEGAKAEEAPAKPKLKIAEKPEEPDLWVKRDDLPSPKRSPRTSSPP 443
Query: 181 VAVAIGPNADPDQKQKLETVK 201
P D D+K L +K
Sbjct: 444 SKSPFSPTTDSDKKHPLSAIK 464
>SB_41291| Best HMM Match : Piwi (HMM E-Value=0)
Length = 598
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 100 HGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERP 132
+G+ G H++ DR LKA I +D G K+ + P
Sbjct: 225 NGKLGGTNHVIADR--LKATITDDKGKKIFDSP 255
>SB_34511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2492
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 83 PLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVL--ERPQFDVAPSV 140
P+ +D G F +R ED NR+K + +G K ERP D
Sbjct: 1027 PIKAHDYGQFERSASLRRSNRSPRSS-AEDVNRVKTAANS-LGRKASASERPSPDAHRGP 1084
Query: 141 SSSRGPSKP 149
S RGPS P
Sbjct: 1085 SDPRGPSDP 1093
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 165 KDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETVKED 203
K S G P G + A+ +GP +P K KL +ED
Sbjct: 237 KKKSAMGGAPAGYLKVTAMVLGPGDEPPIKAKLPPKEED 275
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 181 VAVAIGPNADPDQKQKLETVKEDIL 205
+A+A+G ADPDQ K+ T ++++
Sbjct: 591 IAIALGSTADPDQLGKIATSPKNLI 615
>SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0)
Length = 584
Score = 27.9 bits (59), Expect = 6.4
Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Query: 71 IQKAGPELLMPPPLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLE 130
++ P ++ P A FP G + + + H+ E L E +G +
Sbjct: 187 VESTPPRMVNHNPTATTGSNSFPRSGSINNDHTQQNNHLTETSQAL-----EKLGSSIAS 241
Query: 131 RPQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGS 177
APS++++ S+ P + ++ + P+ P P S
Sbjct: 242 L-SIAPAPSIATAAPISQLPSQPVHMSSINPVLSSKPEPSQPTPPSS 287
>SB_38020| Best HMM Match : Fer2_BFD (HMM E-Value=5.3)
Length = 100
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 93 PVVG-IVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKV 128
P++G + H E P +VE+R RL+ I + M ++V
Sbjct: 46 PLLGKLPTHNMETTSPPVVEERQRLRVAIIDGMAIEV 82
>SB_19519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 146 PSKPPVDAIEEPAVRNFAAKDASPA--GPKPDGSNRYVAVAIGPNADPDQKQKLETVKE 202
P P+D+I A+R ++ P+ P P G+ + P PD + VK+
Sbjct: 169 PDPLPIDSIRVSAIRRVSSASTLPSWNRPPPSGAPPPPPIGAPPPPPPDDDVSMTPVKD 227
>SB_804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 90 GDFPVVGIVRHGEEGDDPHIVEDRNRLKA 118
G FP + ++ H + DD I ED N ++A
Sbjct: 122 GSFPFLALLEHRGDDDDGGITEDFNIIRA 150
>SB_32762| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 830
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/66 (27%), Positives = 25/66 (37%)
Query: 139 SVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLE 198
S SS S P ++ +V KD+ P KP + A PN P Q+
Sbjct: 656 SASSQGKESSRPAFKPDKQSVSQSKCKDSRPVESKPKENRPEKKKATKPNPKPSSSQESN 715
Query: 199 TVKEDI 204
ED+
Sbjct: 716 WSLEDL 721
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 27.5 bits (58), Expect = 8.4
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 117 KAKIDEDMGMKVLER--PQFDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKP 174
K +DE L R P +AP+ S + P A+ A + ++S AG P
Sbjct: 886 KQDMDEKFAFGNLHRTEPLAGMAPA-SGTPNVWYPASAALTNIAAGAKGSPNSSYAGSTP 944
Query: 175 DGSNRYVAVAIGPNAD 190
D S R+V GP A+
Sbjct: 945 DSSARFVTPPSGPTAE 960
>SB_7884| Best HMM Match : rve (HMM E-Value=2.1e-15)
Length = 813
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 9 QRFVNGVPVPSISRRSFRIREKYLIVSVLLT 39
+RFV+G PS+SR SF K+ + S L T
Sbjct: 222 RRFVSGSGAPSVSRESFYGDNKFALWSDLRT 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.138 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,107,155
Number of Sequences: 59808
Number of extensions: 295978
Number of successful extensions: 691
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 671
Number of HSP's gapped (non-prelim): 29
length of query: 207
length of database: 16,821,457
effective HSP length: 79
effective length of query: 128
effective length of database: 12,096,625
effective search space: 1548368000
effective search space used: 1548368000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -