Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002485-TA|BGIBMGA002485-PA|undefined
(207 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063300-1|AAH63300.1| 641|Homo sapiens mannosidase, alpha, cla... 38 0.025
AL358072-1|CAH71079.1| 641|Homo sapiens mannosidase, alpha, cla... 38 0.025
AL157902-1|CAI22315.1| 641|Homo sapiens mannosidase, alpha, cla... 38 0.025
AF053621-1|AAC26200.1| 358|Homo sapiens alpha 1,2-mannosidase I... 38 0.025
AF027156-1|AAC26169.1| 641|Homo sapiens alpha 1,2-mannosidase I... 38 0.025
BC063835-1|AAH63835.1| 615|Homo sapiens VGF nerve growth factor... 35 0.23
BC044212-1|AAH44212.1| 377|Homo sapiens VGF protein protein. 35 0.23
AC004876-3|AAD45830.1| 615|Homo sapiens WUGSC:H_DJ0747G18.3 pro... 35 0.23
AK124054-1|BAC85760.1| 130|Homo sapiens protein ( Homo sapiens ... 32 1.2
BC023641-1|AAH23641.1| 645|Homo sapiens ZC3H14 protein protein. 31 2.2
BC011793-1|AAH11793.1| 736|Homo sapiens zinc finger CCCH-type c... 31 2.2
AY578062-1|AAS90301.1| 571|Homo sapiens putative NY-REN-37 anti... 31 2.2
AY578061-1|AAS90300.1| 579|Homo sapiens putative NY-REN-37 anti... 31 2.2
AY578060-1|AAS90299.1| 736|Homo sapiens putative NY-REN-37 anti... 31 2.2
AL834215-1|CAD38897.1| 571|Homo sapiens hypothetical protein pr... 31 2.2
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 31 3.8
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 31 3.8
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 31 3.8
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 31 3.8
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 31 3.8
>BC063300-1|AAH63300.1| 641|Homo sapiens mannosidase, alpha, class
1A, member 2 protein.
Length = 641
Score = 37.9 bits (84), Expect = 0.025
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 22 RRSFRIREKYLIVSVLLTFGIVWLGALFYLPEFKXXXXXXXXXXXXXKRIQKAGPELLMP 81
R + R+ EK++++ +L F + GA F+LP+ KR ++L+P
Sbjct: 28 RATLRLSEKFILLLILSAFITLCFGAFFFLPD-----------SSKHKRFDLGLEDVLIP 76
Query: 82 PPLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVS 141
A + P V ++ HG D+ E+ RL+ KI D K LE + +
Sbjct: 77 HVDAGKGAKN-PGVFLI-HGP--DEHRHREEEERLRNKIRAD-HEKALE----EAKEKLR 127
Query: 142 SSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETVK 201
SR + + + V+ K+ P P P V + G D D ++K E +K
Sbjct: 128 KSREEIRAEIQTEKNKVVQEMKIKENKPLPPVP--IPNLVGIRGGDPEDNDIREKREKIK 185
Query: 202 E 202
E
Sbjct: 186 E 186
>AL358072-1|CAH71079.1| 641|Homo sapiens mannosidase, alpha, class
1A, member 2 protein.
Length = 641
Score = 37.9 bits (84), Expect = 0.025
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 22 RRSFRIREKYLIVSVLLTFGIVWLGALFYLPEFKXXXXXXXXXXXXXKRIQKAGPELLMP 81
R + R+ EK++++ +L F + GA F+LP+ KR ++L+P
Sbjct: 28 RATLRLSEKFILLLILSAFITLCFGAFFFLPD-----------SSKHKRFDLGLEDVLIP 76
Query: 82 PPLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVS 141
A + P V ++ HG D+ E+ RL+ KI D K LE + +
Sbjct: 77 HVDAGKGAKN-PGVFLI-HGP--DEHRHREEEERLRNKIRAD-HEKALE----EAKEKLR 127
Query: 142 SSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETVK 201
SR + + + V+ K+ P P P V + G D D ++K E +K
Sbjct: 128 KSREEIRAEIQTEKNKVVQEMKIKENKPLPPVP--IPNLVGIRGGDPEDNDIREKREKIK 185
Query: 202 E 202
E
Sbjct: 186 E 186
>AL157902-1|CAI22315.1| 641|Homo sapiens mannosidase, alpha, class
1A, member 2 protein.
Length = 641
Score = 37.9 bits (84), Expect = 0.025
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 22 RRSFRIREKYLIVSVLLTFGIVWLGALFYLPEFKXXXXXXXXXXXXXKRIQKAGPELLMP 81
R + R+ EK++++ +L F + GA F+LP+ KR ++L+P
Sbjct: 28 RATLRLSEKFILLLILSAFITLCFGAFFFLPD-----------SSKHKRFDLGLEDVLIP 76
Query: 82 PPLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVS 141
A + P V ++ HG D+ E+ RL+ KI D K LE + +
Sbjct: 77 HVDAGKGAKN-PGVFLI-HGP--DEHRHREEEERLRNKIRAD-HEKALE----EAKEKLR 127
Query: 142 SSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETVK 201
SR + + + V+ K+ P P P V + G D D ++K E +K
Sbjct: 128 KSREEIRAEIQTEKNKVVQEMKIKENKPLPPVP--IPNLVGIRGGDPEDNDIREKREKIK 185
Query: 202 E 202
E
Sbjct: 186 E 186
>AF053621-1|AAC26200.1| 358|Homo sapiens alpha 1,2-mannosidase IB
protein.
Length = 358
Score = 37.9 bits (84), Expect = 0.025
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 22 RRSFRIREKYLIVSVLLTFGIVWLGALFYLPEFKXXXXXXXXXXXXXKRIQKAGPELLMP 81
R + R+ EK++++ +L F + GA F+LP+ KR ++L+P
Sbjct: 28 RATLRLSEKFILLLILSAFITLCFGAFFFLPD-----------SSKHKRFDLGLEDVLIP 76
Query: 82 PPLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVS 141
A + P V ++ HG D+ E+ RL+ KI D K LE + +
Sbjct: 77 HVDAGKGAKN-PGVFLI-HGP--DEHRHREEEERLRNKIRAD-HEKALE----EAKEKLR 127
Query: 142 SSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETVK 201
SR + + + V+ K+ P P P V + G D D ++K E +K
Sbjct: 128 KSREEIRAEIQTEKNKVVQEMKIKENKPLPPVP--IPNLVGIRGGDPEDNDIREKREKIK 185
Query: 202 E 202
E
Sbjct: 186 E 186
>AF027156-1|AAC26169.1| 641|Homo sapiens alpha 1,2-mannosidase IB
protein.
Length = 641
Score = 37.9 bits (84), Expect = 0.025
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 22 RRSFRIREKYLIVSVLLTFGIVWLGALFYLPEFKXXXXXXXXXXXXXKRIQKAGPELLMP 81
R + R+ EK++++ +L F + GA F+LP+ KR ++L+P
Sbjct: 28 RATLRLSEKFILLLILSAFITLCFGAFFFLPD-----------SSKHKRFDLGLEDVLIP 76
Query: 82 PPLAQNDVGDFPVVGIVRHGEEGDDPHIVEDRNRLKAKIDEDMGMKVLERPQFDVAPSVS 141
A + P V ++ HG D+ E+ RL+ KI D K LE + +
Sbjct: 77 HVDAGKGAKN-PGVFLI-HGP--DEHRHREEEERLRNKIRAD-HEKALE----EAKEKLR 127
Query: 142 SSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETVK 201
SR + + + V+ K+ P P P V + G D D ++K E +K
Sbjct: 128 KSREEIRAEIQTEKNKVVQEMKIKENKPLPPVP--IPNLVGIRGGDPEDNDIREKREKIK 185
Query: 202 E 202
E
Sbjct: 186 E 186
>BC063835-1|AAH63835.1| 615|Homo sapiens VGF nerve growth factor
inducible protein.
Length = 615
Score = 34.7 bits (76), Expect = 0.23
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 90 GDFPVVGIVRHGEEGDDPHIVE--DRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPS 147
G P V R+ E D+ + + D L A + ++ L+RP APS S +GP
Sbjct: 54 GSAPEVRGARNSEPQDEGELFQGVDPRALAAVL-----LQALDRPASPPAPS-GSQQGPE 107
Query: 148 KPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETV 200
+ +A+ VR+ +P P+P R GP A D ++LE +
Sbjct: 108 EEAAEALLTETVRSQTHSLPAPESPEPAAPPRPQTPENGPEAS-DPSEELEAL 159
>BC044212-1|AAH44212.1| 377|Homo sapiens VGF protein protein.
Length = 377
Score = 34.7 bits (76), Expect = 0.23
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 90 GDFPVVGIVRHGEEGDDPHIVE--DRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPS 147
G P V R+ E D+ + + D L A + ++ L+RP APS S +GP
Sbjct: 54 GSAPEVRGARNSEPQDEGELFQGVDPRALAAVL-----LQALDRPASPPAPS-GSQQGPE 107
Query: 148 KPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETV 200
+ +A+ VR+ +P P+P R GP A D ++LE +
Sbjct: 108 EEAAEALLTETVRSQTHSLPAPESPEPAAPPRPQTPENGPEAS-DPSEELEAL 159
>AC004876-3|AAD45830.1| 615|Homo sapiens WUGSC:H_DJ0747G18.3
protein.
Length = 615
Score = 34.7 bits (76), Expect = 0.23
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 90 GDFPVVGIVRHGEEGDDPHIVE--DRNRLKAKIDEDMGMKVLERPQFDVAPSVSSSRGPS 147
G P V R+ E D+ + + D L A + ++ L+RP APS S +GP
Sbjct: 54 GSAPEVRGARNSEPQDEGELFQGVDPRALAAVL-----LQALDRPASPPAPS-GSQQGPE 107
Query: 148 KPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVAIGPNADPDQKQKLETV 200
+ +A+ VR+ +P P+P R GP A D ++LE +
Sbjct: 108 EEAAEALLTETVRSQTHSLPAPESPEPAAPPRPQTPENGPEAS-DPSEELEAL 159
>AK124054-1|BAC85760.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ42060 fis, clone SYNOV2005448. ).
Length = 130
Score = 32.3 bits (70), Expect = 1.2
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 115 RLKAKIDEDMGMK--VLERPQ--FDVAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPA 170
RL+ K+ MG LE+P P ++ R P PP +P+ + A A PA
Sbjct: 25 RLQPKLARSMGQVPLCLEKPGALLPCPPEPTAGRTPPAPPHPVARDPSENSEAGPRAVPA 84
Query: 171 GPKPDG 176
G +P G
Sbjct: 85 GARPVG 90
>BC023641-1|AAH23641.1| 645|Homo sapiens ZC3H14 protein protein.
Length = 645
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 120 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRN 161
IDED+ V E P P+V+ + G S+P ++ PA RN
Sbjct: 92 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 132
>BC011793-1|AAH11793.1| 736|Homo sapiens zinc finger CCCH-type
containing 14 protein.
Length = 736
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 120 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRN 161
IDED+ V E P P+V+ + G S+P ++ PA RN
Sbjct: 182 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 222
>AY578062-1|AAS90301.1| 571|Homo sapiens putative NY-REN-37 antigen
isoform 3 protein.
Length = 571
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 120 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRN 161
IDED+ V E P P+V+ + G S+P ++ PA RN
Sbjct: 148 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 188
>AY578061-1|AAS90300.1| 579|Homo sapiens putative NY-REN-37 antigen
isoform 2 protein.
Length = 579
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 120 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRN 161
IDED+ V E P P+V+ + G S+P ++ PA RN
Sbjct: 182 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 222
>AY578060-1|AAS90299.1| 736|Homo sapiens putative NY-REN-37 antigen
isoform 1 protein.
Length = 736
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 120 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRN 161
IDED+ V E P P+V+ + G S+P ++ PA RN
Sbjct: 182 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 222
>AL834215-1|CAD38897.1| 571|Homo sapiens hypothetical protein
protein.
Length = 571
Score = 31.5 bits (68), Expect = 2.2
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 120 IDEDMGMKVLERPQFDVAPSVSSSRGPSKPPVDAIEEPAVRN 161
IDED+ V E P P+V+ + G S+P ++ PA RN
Sbjct: 148 IDEDLNF-VQENPLSQKKPTVTLTYGSSRPSIEIYRPPASRN 188
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 136 VAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVA 184
VA +V+++ G PPV EP + A ++ PA P+ S+ + AVA
Sbjct: 144 VAENVTNNEGSPPPPVKVSSEPPTQ--ATPNSVPAVPQLPSSDAFAAVA 190
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 136 VAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVA 184
VA +V+++ G PPV EP + A ++ PA P+ S+ + AVA
Sbjct: 144 VAENVTNNEGSPPPPVKVSSEPPTQ--ATPNSVPAVPQLPSSDAFAAVA 190
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 136 VAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVA 184
VA +V+++ G PPV EP + A ++ PA P+ S+ + AVA
Sbjct: 144 VAENVTNNEGSPPPPVKVSSEPPTQ--ATPNSVPAVPQLPSSDAFAAVA 190
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 136 VAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVA 184
VA +V+++ G PPV EP + A ++ PA P+ S+ + AVA
Sbjct: 144 VAENVTNNEGSPPPPVKVSSEPPTQ--ATPNSVPAVPQLPSSDAFAAVA 190
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
protein rA4 protein.
Length = 1157
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 136 VAPSVSSSRGPSKPPVDAIEEPAVRNFAAKDASPAGPKPDGSNRYVAVA 184
VA +V+++ G PPV EP + A ++ PA P+ S+ + AVA
Sbjct: 154 VAENVTNNEGSPPPPVKVSSEPPTQ--ATPNSVPAVPQLPSSDAFAAVA 200
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.138 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,541,368
Number of Sequences: 224733
Number of extensions: 1414282
Number of successful extensions: 3903
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3898
Number of HSP's gapped (non-prelim): 20
length of query: 207
length of database: 73,234,838
effective HSP length: 87
effective length of query: 120
effective length of database: 53,683,067
effective search space: 6441968040
effective search space used: 6441968040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)
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