Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002483-TA|BGIBMGA002483-PA|IPR011304|L-lactate
dehydrogenase
(1614 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-14
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 0.002
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 38 0.066
SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 38 0.088
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 38 0.088
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 37 0.12
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.12
SB_57086| Best HMM Match : PT (HMM E-Value=2.4) 37 0.12
SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.15
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 36 0.27
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.62
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.62
SB_39600| Best HMM Match : Sushi (HMM E-Value=0) 35 0.62
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.62
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 34 0.82
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 34 0.82
SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 1.1
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 34 1.1
SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.4
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 33 1.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.4
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 33 1.4
SB_50445| Best HMM Match : PT (HMM E-Value=2) 33 1.9
SB_48656| Best HMM Match : Extensin_2 (HMM E-Value=0.0009) 33 1.9
SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027) 33 1.9
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.9
SB_27106| Best HMM Match : PLDc (HMM E-Value=7e-05) 33 2.5
SB_25486| Best HMM Match : Glycos_transf_3 (HMM E-Value=7.3) 33 2.5
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 3.3
SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083) 32 4.4
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 4.4
SB_37366| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.82) 32 4.4
SB_51172| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 4.4
SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10) 32 4.4
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 32 4.4
SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07) 32 4.4
SB_32684| Best HMM Match : Extensin_2 (HMM E-Value=0.96) 31 5.8
SB_27115| Best HMM Match : SAM_1 (HMM E-Value=1.7e-08) 31 5.8
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 31 5.8
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 31 5.8
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 31 7.6
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.6
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.6
SB_563| Best HMM Match : Ank (HMM E-Value=0) 31 7.6
SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.6
SB_51186| Best HMM Match : Cornifin (HMM E-Value=0.00014) 31 7.6
SB_40321| Best HMM Match : CutA1 (HMM E-Value=8.3) 31 7.6
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.6
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 7.6
SB_23226| Best HMM Match : Herpes_UL43 (HMM E-Value=1.9) 31 7.6
>SB_59467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 79.0 bits (186), Expect = 3e-14
Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 13/118 (11%)
Query: 113 FQLGCMADASECFEXXXXXXXXXXXXXXXXXXXXXXXXPHCVPHRKFAMMLVEQSVCGAC 172
FQLG M DA+ECFE HC+ H+KFAM ++EQ++C C
Sbjct: 102 FQLGDMDDAAECFENILSRMHFHLAMNEHDDGCNAK---HCISHQKFAMQMIEQTIC-PC 157
Query: 173 QATSEPLPFTQMVHYVSATALTAQA-ALGEHGDS------FGLLLKKAGGMGDIRDCP 223
SEP PF ++V YVSA+AL +QA AL + G+ FG LL++ G D R+CP
Sbjct: 158 GERSEPFPFFELVRYVSASALCSQAKALEKRGEKYDPSRHFGNLLRRTG--EDTRECP 213
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 43.2 bits (97), Expect = 0.002
Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
Query: 1255 PTYQTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNALNG--NQ-INQ--SLPTSVPQNV 1309
P Q+A Q +V+K G PPNQ N NQ NQ + PT+ P N
Sbjct: 176 PNIQSASMDKTSQNHVRKIGGTLHQPTNLPPNQPYKQTNQPTNQPTNQPTNQPTNQPTNQ 235
Query: 1310 QSPIPYTQPPPVYSNQSNASPPNFSQNPVNRLT-PTAQNATYPIKHAANLQ-RNVPNQ 1365
+ P QP +NQ P N + P N+ PT P ANLQ + P+Q
Sbjct: 236 PTNQPTNQPTNQPTNQPTNQPTNQTNQPTNQPNQPTNLPTDQPTNQPANLQTTHAPSQ 293
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 37.9 bits (84), Expect = 0.066
Identities = 30/110 (27%), Positives = 42/110 (38%), Gaps = 4/110 (3%)
Query: 1270 VQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNAS 1329
+++S+G P N NA++ I S PTS Q Q P P +PPP
Sbjct: 163 LRQSIGTTFPPTRLPGNARVNAIDQISIGTSHPTSPSQITQPPPPPPRPPP----SPPPP 218
Query: 1330 PPNFSQNPVNRLTPTAQNATYPIKHAANLQRNVPNQYPPNHRAEINQLPT 1379
PP S +P P + P+ +PN P + LPT
Sbjct: 219 PPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPPPTLGYLPT 268
>SB_57482| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 789
Score = 37.5 bits (83), Expect = 0.088
Identities = 26/102 (25%), Positives = 36/102 (35%), Gaps = 3/102 (2%)
Query: 1269 NVQKSVGVYGTSPTAPPNQTPNALNG--NQINQSLPTSVPQNVQSPIPYTQPPP-VYSNQ 1325
+VQ +P A QT N + QS + P +P PY P P Y+
Sbjct: 370 SVQDDNSTDSQTPQAQNTQTQGYQNAADQSLQQSAGYTYPAQAPAPAPYQAPAPETYAAS 429
Query: 1326 SNASPPNFSQNPVNRLTPTAQNATYPIKHAANLQRNVPNQYP 1367
+N + SQ A A YP + + P YP
Sbjct: 430 ANTTAAEISQQNYTASPTAAYPAYYPASSPVSYPASSPASYP 471
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 37.5 bits (83), Expect = 0.088
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 1255 PTYQTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIP 1314
P Q Q + QPQ +Q G +P+ P+ P+ Q +P P + P P
Sbjct: 33 PPGQQQQQQQQPQTQMQSPYGAGQCAPSCAPSYQPSCCQQQQ-PMMMPFPPPPPIYMPPP 91
Query: 1315 --YTQPPPVY 1322
Y PPPVY
Sbjct: 92 PVYMPPPPVY 101
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 37.1 bits (82), Expect = 0.12
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Query: 1278 GTSPTAPPNQTPNALNGNQIN---QSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFS 1334
G P + P GNQ+N S P +P N +P +QP P NQ N PP S
Sbjct: 901 GNQVNPPMSSQPQPPPGNQVNPPMSSQPQPLPGNQVNPPMSSQPQPPPGNQVN--PPMSS 958
Query: 1335 Q---NPVNRLTPTAQNATYPIK-HAANLQRNVPNQYPPNHRAEINQ 1376
Q P N++ P + P + N + Q PP ++ ++ +
Sbjct: 959 QPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQVQLKE 1004
Score = 34.7 bits (76), Expect = 0.62
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 1278 GTSPTAPPNQTPNALNGNQIN---QSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFS 1334
G P + P GNQ+N S P P N +P +QP P+ NQ N PP S
Sbjct: 885 GNQVNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPLPGNQVN--PPMSS 942
Query: 1335 Q---NPVNRLTPTAQNATYP 1351
Q P N++ P + P
Sbjct: 943 QPQPPPGNQVNPPMSSQPQP 962
Score = 33.5 bits (73), Expect = 1.4
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 1278 GTSPTAPPNQTPNALNGNQIN---QSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFS 1334
G P + P GNQ+N S P P N +P +QP P NQ N PP S
Sbjct: 869 GNQVNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQVNPPMSSQPQPPPGNQVN--PPMSS 926
Query: 1335 QN---PVNRLTPTAQNATYP 1351
Q P N++ P + P
Sbjct: 927 QPQPLPGNQVNPPMSSQPQP 946
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 37.1 bits (82), Expect = 0.12
Identities = 57/256 (22%), Positives = 81/256 (31%), Gaps = 14/256 (5%)
Query: 1273 SVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPN 1332
SV +S T+ P L T+ P +P P T P +N +PP+
Sbjct: 38 SVSASASSSTSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTPPS 97
Query: 1333 FSQNPVNRLTP------TAQNATYPIKHAANLQRNVPNQYPPNHRAEINQLPTNAYYHRL 1386
N LTP T Q YP + + LQ+ P R + P++
Sbjct: 98 CQSNTPRPLTPPPRQSNTTQPPAYPPRQSYALQQTTPLHTSQPLRPTPRR-PSDTPQPFT 156
Query: 1387 PQXXXXXXXXXXXXXXXRQYGNTVPQSNTLPYQSVSSNTSAYQNYHNPPTSYITAEYSSR 1446
P + T PQ + + S +TS+Y S + +
Sbjct: 157 PPPRPFDDLRSLSSTPRK--STTSPQFTPFTHTTTSQSTSSYSLQATNAYSAMLEDEQPN 214
Query: 1447 FPQTNANHYNQSPYQRXXXXXXXXXXXXYNNNTYQKLNTNYYVDNASQPRAVDTRPYPPA 1506
+T A H S Q N +KL N V QP V +
Sbjct: 215 NWETFA-HSTTSAIQDLKAEVKTLKQEV--KNLKRKLKVNKDVPAEDQPSPVVR--FDKT 269
Query: 1507 QRPMYNQNVETSNNEQ 1522
YNQN E S +Q
Sbjct: 270 SNKQYNQNRELSQQKQ 285
>SB_57086| Best HMM Match : PT (HMM E-Value=2.4)
Length = 226
Score = 37.1 bits (82), Expect = 0.12
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 9/113 (7%)
Query: 1350 YPIKHAANLQRNVPNQYPPNHRAEINQLPTNAYYHRLPQXXXXXXXXXXXXXXXRQYGNT 1409
YP ++ P+QYP + T+ Y H+ P QY +
Sbjct: 18 YPHQYTHQYTHQYPHQYPHQY--------THQYTHQYPHQYTHQYTHQYTHQYTHQYTHQ 69
Query: 1410 VPQSNTLPYQSVSSNTSAYQNYHNPPTSYITAEYSSRFPQTNANHY-NQSPYQ 1461
T PY ++ +Q H+ T T +Y ++P + Y +Q P+Q
Sbjct: 70 YTHQYTHPYTHPYTHQYTHQYTHHQYTHQYTHQYPHQYPHQYPHQYPHQYPHQ 122
Score = 31.1 bits (67), Expect = 7.6
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 1/106 (0%)
Query: 1350 YPIKHAANLQRNVPNQYPPNHRAEINQLPTNAYYHRLPQXXXXXXXXXXXXXXXRQYGNT 1409
YP ++ P+QYP + + T+ Y H+ QY +
Sbjct: 103 YPHQYPHQYPHQYPHQYPHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQYTHQ 162
Query: 1410 VPQSNTLPYQSVSSNTSAYQNYHNPPTSYITAEYSSRFPQTNANHY 1455
T PY ++ + Y +P T T +Y ++ + Y
Sbjct: 163 YTHQCTHPYTHQYTHPYTHP-YTHPYTHQYTHQYPHQYTHQCTHQY 207
>SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1144
Score = 36.7 bits (81), Expect = 0.15
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 1286 NQTPNALNGNQINQSLP--TSVPQNVQSPIPYTQPPPVYSN-----QSNASPPNFSQNPV 1338
N T ++ Q ++P TSV + Q P P+TQP + Q S P F
Sbjct: 730 NTTKGGISRGQPTLTVPARTSVATH-QQPRPHTQPSAQSRSYGLPPQQPGSHPVFGTTSE 788
Query: 1339 NRLTPTAQNATYPIKHAANLQRNVPNQYPPNH 1370
R P Q A++P+ + QR +P Q P +H
Sbjct: 789 QRGLPPQQPASHPVFGTTSEQRGLPPQQPASH 820
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 35.9 bits (79), Expect = 0.27
Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 10/121 (8%)
Query: 1258 QTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQ-NVQSPIPYT 1316
Q Q R Q +++ + + PP A G Q+ P+ PQ Q P PY
Sbjct: 1586 QQLQQRFNQQQTLRRRMALMQNRGLPPPQVPVPAPTGGIPQQAHPSIHPQMQTQQPPPYQ 1645
Query: 1317 QPPPVYSNQSNASPPNFSQNPVNRLTPTAQ----NATYPIK-----HAANLQRNVPNQYP 1367
QP + A PP + V ++T A A P+ + +Q+ P Q P
Sbjct: 1646 QPQQMPQKPVTAGPPPGAVAAVQQITRDANIQAAQARQPMPVSTPGQMSMVQQGFPTQQP 1705
Query: 1368 P 1368
P
Sbjct: 1706 P 1706
Score = 31.5 bits (68), Expect = 5.8
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 6/103 (5%)
Query: 1258 QTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYT- 1316
Q QS++ PQ + + G T Q N + QS+ + P QSP P T
Sbjct: 705 QQQQSQMPPQSSQSMTGGQNNTQSLTGQGQGKNQMPSPATPQSMSSEKPSYPQSPKPSTG 764
Query: 1317 -----QPPPVYSNQSNASPPNFSQNPVNRLTPTAQNATYPIKH 1354
P P S P + + ++ +A + + P K+
Sbjct: 765 KGAVPSPSPQRPASSMGKPDTIEKQGITPVSESASSTSQPQKN 807
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 34.7 bits (76), Expect = 0.62
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 1251 QNTYPTYQTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQ 1310
Q + P+ A LQP YN + T APP P L +Q +P VP Q
Sbjct: 891 QPSAPSSMPAPVPLQP-YNTPMPP-ISSTPYQAPPTLPPTTLTTPSWSQPVP--VPSMYQ 946
Query: 1311 SPIP-YTQPPPVYSNQSNASPPNFSQNPVNRLTPTAQNATY 1350
P QPP +PP+F + + P++Q + Y
Sbjct: 947 PQPPGIMQPPTSIPPSQPMAPPSFPPSSMGGFPPSSQPSMY 987
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 34.7 bits (76), Expect = 0.62
Identities = 26/76 (34%), Positives = 28/76 (36%), Gaps = 6/76 (7%)
Query: 1281 PTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQP----PPVYSNQ-SNASPPNFSQ 1335
PT N P Q PT P Q+P P P PPV S + A PP S
Sbjct: 716 PTQAQNPAPTPAP-TQAQNPAPTPAPTQAQNPAPTPAPTQAQPPVPSPAPTQAQPPAPSP 774
Query: 1336 NPVNRLTPTAQNATYP 1351
P L T N T P
Sbjct: 775 APTQALLQTMANQTQP 790
Score = 31.5 bits (68), Expect = 5.8
Identities = 29/95 (30%), Positives = 32/95 (33%), Gaps = 3/95 (3%)
Query: 1281 PTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPVNR 1340
P P A Q PT P Q+P P T P N + P +Q PV
Sbjct: 703 PEVPYPTLSTAAQPTQAQNPAPTPAPTQAQNPAP-TPAPTQAQNPAPTPAPTQAQPPVPS 761
Query: 1341 LTPT-AQ-NATYPIKHAANLQRNVPNQYPPNHRAE 1373
PT AQ A P A LQ P AE
Sbjct: 762 PAPTQAQPPAPSPAPTQALLQTMANQTQPATATAE 796
>SB_39600| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1368
Score = 34.7 bits (76), Expect = 0.62
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 11/145 (7%)
Query: 1242 GNHAEYVRLQNTYP-TYQTAQSRLQ--PQYNVQKSVGVYGTSPTAPPNQTPNALNGNQIN 1298
G+H+ + T+ T T + + + P +V + PPN N
Sbjct: 580 GSHSRVCQANGTWSGTTTTCKEKCERYPSMDVSQCSMGCDVDQDCPPNHMCRCDGMQTTN 639
Query: 1299 QSLPTSV--PQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPVNRLTPTAQNATYPIKHAA 1356
+ PT+ P N P P ++ SNA+ P+ + +P N P+ NA +P A
Sbjct: 640 NNHPTNANHPSNANHPSNANHPSNA-NHPSNANHPSNANHPSNANHPS--NANHPSN--A 694
Query: 1357 NLQRNVPNQYPPNHRAEINQLPTNA 1381
N N + NH + N P+NA
Sbjct: 695 NHPSNANHPSNANHPSNANH-PSNA 718
Score = 32.3 bits (70), Expect = 3.3
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 1282 TAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPVNRL 1341
T N NA + + N + P N P P ++ SNA+ P+ + +P N
Sbjct: 637 TTNNNHPTNANHPSNANHPSNANHPSNANHPSNANHPSNA-NHPSNANHPSNANHPSNAN 695
Query: 1342 TPTAQNATYPIKHAANLQRNVPNQYPPNHRAEINQLPTNA 1381
P+ NA +P AN N + NH + N P+NA
Sbjct: 696 HPS--NANHPSN--ANHPSNANHPSNANHPSNANH-PSNA 730
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 34.7 bits (76), Expect = 0.62
Identities = 37/171 (21%), Positives = 53/171 (30%), Gaps = 6/171 (3%)
Query: 1270 VQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNAS 1329
VQ + V P P + Q + S P Q Y+ P Q+ +
Sbjct: 703 VQSATNVVSVMSAPPAYVPPTSAPPAQTQVTDTYSTPAQTQVTDTYSTPAQTTETQNYNA 762
Query: 1330 PPNFSQNPVNRLTPTAQNAT---YPIKHAANLQRNVPN-QYPPNHRAEINQLPTNAYYHR 1385
P +Q+P + A+ T Y A + Q PP+ E P
Sbjct: 763 PVETTQSPETTVPYNAEMHTTDSYQTTEANDRQSQTTEANTPPSQTTEAYTPPAQTTEAN 822
Query: 1386 LPQXXXXXXXXXXXXXXXRQYGNTVPQSNTLPYQSVSSNTSAYQNYHNPPT 1436
P Y NT ++ LPYQ S+ +S PPT
Sbjct: 823 TPPAQTTEANTPPVQTT-ESY-NTPTETTALPYQETSTESSTTAQPTQPPT 871
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 34.3 bits (75), Expect = 0.82
Identities = 34/133 (25%), Positives = 47/133 (35%), Gaps = 19/133 (14%)
Query: 1238 VGADGNHAEYVRLQNTYPTYQTAQSRLQPQYN------VQKSVGVYGTSPTAPPNQTPNA 1291
+G +G H + + T + + P YN + Y S PP Q
Sbjct: 862 MGKNGAHVMMTTVNSNNQTVDANGTYINPLYNPPDTAVTPQGTDAYNVSEVKPPQQ---- 917
Query: 1292 LNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPVN-----RLTPTAQ 1346
Q Q++PTS PQ +Q P T P S Q + Q P + TP Q
Sbjct: 918 ----QQPQTMPTSQPQQLQEPSQETIPTQKPSQQLQQTQAQLPQQPQETQEQAQATPQQQ 973
Query: 1347 NATYPIKHAANLQ 1359
AT + A Q
Sbjct: 974 LATQDKQQATQGQ 986
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 34.3 bits (75), Expect = 0.82
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 731 RRKNRSMPDLTEGADGNKENSNKEKRVSSVDDTDVGRKTNDDKSPLSGYLSEGHLEYSAA 790
++K + LT+ D EN N E++ DD D ++ND + S ++ + ++
Sbjct: 734 KKKQKKKKKLTQDKDVETENKNNEEKEKLEDDADQDHQSNDSEGEGSNERTKSPI---SS 790
Query: 791 SGTNPNLERSKLMRKSFHGSAGKILTAA 818
N N ++S RK + G + T A
Sbjct: 791 IIDNTNSQKSDTDRKLSSDTLGTLTTMA 818
>SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 33.9 bits (74), Expect = 1.1
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 7/102 (6%)
Query: 1251 QNTYPTYQTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQ 1310
Q P Q A L Q N + G P P +Q PN G Q NQ PT Q
Sbjct: 52 QANNPLTQQANKSLTQQAN--NPLTPKGKQPNQPTDQQPNKPTGQQPNQ--PTG--QQPN 105
Query: 1311 SPIPYTQPPPVYSNQSNASPPNFSQNPVNRLT-PTAQNATYP 1351
P P ++ + F+Q +LT PT Q T P
Sbjct: 106 QPTGQQPKDPTGQQPNDPTGKQFNQPTGQQLTDPTGQQPTDP 147
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 33.9 bits (74), Expect = 1.1
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 1311 SPIPYTQPPPVYSN-QSNASPPNFSQNPVNRLTPTAQNATYPIKHAANLQRNVPNQYPPN 1369
SP Y Q PP +S Q PPN + P ++T Y +K A Q Q P
Sbjct: 524 SPEQYQQVPPPHSQMQQPNQPPNMMKGPRPQMTRNQYLQEYMMKRAQMQQHYKQQQQPYM 583
Query: 1370 HRAEINQLPTNAYYHRLP 1387
NQ+P N +++P
Sbjct: 584 PNQMPNQMP-NQMPNQMP 600
Score = 31.5 bits (68), Expect = 5.8
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 1257 YQTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNAL---NGNQIN-QSLPTSVPQNVQSP 1312
Y ++++Q Y Q+ + P PNQ PN + G Q+ Q P Q+
Sbjct: 564 YMMKRAQMQQHYKQQQQPYMPNQMPNQMPNQMPNQMPNQGGPQMGYQMQPAGYQQSGYQQ 623
Query: 1313 IPYTQPPPVYSNQSNASPPNFSQ 1335
P PPP Y+ + + FSQ
Sbjct: 624 QP--TPPPPYTPAATMNQNPFSQ 644
>SB_45305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 33.5 bits (73), Expect = 1.4
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 1292 LNG--NQINQSLP----TSVPQNVQSPIPYTQPP----PVYSNQSNASPPNFSQNPVNRL 1341
LNG +QIN S P ++PQ +Q P +Q P P +++ +++PP + P +
Sbjct: 135 LNGYPSQINFSFPQTAAVTLPQQIQHPTQLSQQPQQPDPPPTHKPHSAPPPPVKTPQEIV 194
Query: 1342 TPTAQNATYPIKH 1354
TPTA P+++
Sbjct: 195 TPTAHAGKSPMEN 207
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 33.5 bits (73), Expect = 1.4
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 5/100 (5%)
Query: 1255 PTYQTAQSRLQPQYNVQKSVGVYGTSPTAPP---NQTPNALNGNQINQSLPTSVPQNVQS 1311
PT Q + P N V V T PP + P + + + PT+VP V +
Sbjct: 39 PT-QAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTVPPPVVTDA-PTTVPPPVVT 96
Query: 1312 PIPYTQPPPVYSNQSNASPPNFSQNPVNRLTPTAQNATYP 1351
P T PPPV ++ PP + + P Q P
Sbjct: 97 DAPTTVPPPVVTDAPTTVPPPVVTDAPTTVPPPVQPTEPP 136
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.5 bits (73), Expect = 1.4
Identities = 27/93 (29%), Positives = 28/93 (30%)
Query: 1277 YGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQN 1336
Y P AP PN N P S P PPP+Y N PPN
Sbjct: 116 YPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYP 175
Query: 1337 PVNRLTPTAQNATYPIKHAANLQRNVPNQYPPN 1369
P P P N PN PPN
Sbjct: 176 PPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPN 208
Score = 32.3 bits (70), Expect = 3.3
Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Query: 1276 VYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQ 1335
+Y P PP P + P P N P P P P N PPN +
Sbjct: 160 LYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPN-AP 218
Query: 1336 NPVNRLTPTAQNATYP 1351
NP P A N YP
Sbjct: 219 NPPYPPPPNAPNPPYP 234
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 33.5 bits (73), Expect = 1.4
Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 985 LQEELQKIQNINEVSNTNETQAPQGTLLAQLQEKRNQI--LKNENLTKPHQVETVNHTGD 1042
L+ ++ IQ+ NE + + ++ + +++EK +I L+ E T HQ+E +
Sbjct: 1086 LKNQITVIQSENEANVSIHVESQTESYKQEVREKEYEIEKLRTERATFEHQLEGMTSQIT 1145
Query: 1043 SLVRELQAALKLKRSGSLEGQLSSPSEKTIENNINVRNIASRFENNTQN 1091
+ E + +KL + EG S EK + +R+ ++EN ++
Sbjct: 1146 RIKAENEGHIKLVLESNAEGYESQIKEKDLVIQ-QLRDEREQYENQIES 1193
>SB_50445| Best HMM Match : PT (HMM E-Value=2)
Length = 206
Score = 33.1 bits (72), Expect = 1.9
Identities = 35/166 (21%), Positives = 57/166 (34%), Gaps = 12/166 (7%)
Query: 1295 NQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPVNRLTPTAQNATYPIKH 1354
N + Q++PT P P Q S PN + V P + Y +
Sbjct: 21 NSMKQNVPTGYPSTEHKCTNRVPKQPTQMYQQGTSTPNTN---VPTRVPKHRTQMYQ-QG 76
Query: 1355 AANLQRNVPNQYPPNHRAEINQLPTN-AYYHRLPQXXXXXXXXXXXXXXXRQYGNTVPQS 1413
+ NVP Y N++P + ++ + N VP+
Sbjct: 77 TSTPNTNVPTGYLNTEHKCTNRVPQHRTQMYQQGTSTPNTNVPTGYLNTEHKCTNRVPKQ 136
Query: 1414 NTLPYQSVSSNTSAYQNYHNPPTSYITAEY--SSRFPQTNANHYNQ 1457
T YQ +S + N PT Y+ +E+ ++R P+ Y Q
Sbjct: 137 QTQMYQQGTSTPNT-----NVPTGYLNSEHKCTNRVPKQRTQMYQQ 177
>SB_48656| Best HMM Match : Extensin_2 (HMM E-Value=0.0009)
Length = 392
Score = 33.1 bits (72), Expect = 1.9
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 1276 VYGTSPTAPPNQTPNALNGNQINQ-SLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFS 1334
V GT P + P+A++ + Q S T + SP P S+ S PP
Sbjct: 128 VNGTKPESKQAPLPSAISTTTMQQVSQSTGLQVENISPAPPPDKQRCKSSDSRPPPPAEP 187
Query: 1335 QNPVNRLTP-TAQNATYPIKHAANLQRNVPNQYPPNHRAEI--NQLPTNAYYHRLPQ 1388
Q P+ +L P Q A P + A Q+ P P +A + Q P + LPQ
Sbjct: 188 QAPLPQLAPLPKQQAPLPQQQAPLPQQQAP---LPQQQAPLPQQQAPLPQQHAPLPQ 241
>SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)
Length = 406
Score = 33.1 bits (72), Expect = 1.9
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 1306 PQNVQSPIP----YTQPPPVYSNQSNASPPNFSQNPVNRLTPTAQNATYPIKHAANLQRN 1361
P N P+P TQ +YS S A+PP + + P++ A+YP + A+ +
Sbjct: 29 PYNYHIPLPPVTKQTQARSMYS--SYAAPPPYQYSAYLASYPSSYPASYPASYPASYPAS 86
Query: 1362 VPNQYPPNH 1370
P YP ++
Sbjct: 87 YPASYPASY 95
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 33.1 bits (72), Expect = 1.9
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 756 RVSSVDDTDVGR-KTNDDKSPLSGYLSEGHLEYSAASGTNPNLERSKLMRK 805
RVS DD R KT+D S +G S HL+Y A LER RK
Sbjct: 742 RVSIWDDPPRSRIKTDDSASSTTGGTSSKHLDYDQAERNEDTLERMARSRK 792
>SB_27106| Best HMM Match : PLDc (HMM E-Value=7e-05)
Length = 515
Score = 32.7 bits (71), Expect = 2.5
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 369 FPAPEPRRAITPAPERPANGYARRAVTPGPDNDSDYMNRKVMESANILDAQAARRAPLVR 428
FPA + IT +P R NG RA P D +N + SA A RA L
Sbjct: 27 FPAASSEKPITSSPRRDENGVGTRATPVTPGMLPDTVNTFSIASAP--SGVAGLRAALPL 84
Query: 429 SLSTGS 434
S+++GS
Sbjct: 85 SVASGS 90
>SB_25486| Best HMM Match : Glycos_transf_3 (HMM E-Value=7.3)
Length = 370
Score = 32.7 bits (71), Expect = 2.5
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 369 FPAPEPRRAITPAPERPANGYARRAVTPGPDNDSDYMNRKVMESANILDAQAARRAPLVR 428
FPA + IT +P R NG RA P D +N + SA A RA L
Sbjct: 27 FPAASSEKPITSSPRRDENGVGTRATPVTPGMLPDTVNTFSIASAP--SGVAGLRAALPL 84
Query: 429 SLSTGS 434
S+++GS
Sbjct: 85 SVASGS 90
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 32.3 bits (70), Expect = 3.3
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Query: 368 PFPAPEPRRAITPAPERPANGYARRAVTPGPDNDSDYMNRKVMESANILDAQAARRAPLV 427
P P P+ +RA TP P+ ARR V + D N + ++ + A +R
Sbjct: 949 PLPPPQRKRASTP----PSPRRARRKVASPEEQDRQKSNGR---NSRSVSPSAVKRTKGS 1001
Query: 428 RSLSTGSTSDSNERPRARRDS 448
+ + S S S ER R RDS
Sbjct: 1002 KRSESRSVSRSPERDRKGRDS 1022
>SB_55131| Best HMM Match : fn3 (HMM E-Value=0.0083)
Length = 1266
Score = 31.9 bits (69), Expect = 4.4
Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 17/128 (13%)
Query: 1242 GNHAEYVRL-QNTYPTYQTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNALNGNQINQS 1300
G+HA + + P Q AQ + QP V + +P Q N + G Q
Sbjct: 1009 GSHAATIATGRPPVPAQQLAQHQQQPA-GVLITSRPTAAAPQHHQPQPANQVTGIPAQQR 1067
Query: 1301 LP-------TSVP-QNVQSPIPYTQPP----PVYSNQSNASPPNFSQNPVNRLTPTAQNA 1348
LP T P Q VQ P+P PP P + A PP P ++ P +
Sbjct: 1068 LPQPTGNPVTGRPHQAVQQPLPQQLPPQYRPPAIVTAAVARPPQVQGPPTQQVVP---GS 1124
Query: 1349 TYPIKHAA 1356
+ P++H A
Sbjct: 1125 SPPVRHQA 1132
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 31.9 bits (69), Expect = 4.4
Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Query: 1279 TSPTAPPNQTP---NALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASP-PNFS 1334
++P++ P+ P +++ + I+ P+S P S P ++P P S+ ++ P PN S
Sbjct: 517 SNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSSNPSSEPSPNPSSNPSSDPSPNPS 576
Query: 1335 QNPVNRLTPTAQNATYPIKHAANLQRNVPNQ 1365
+P +P++ ++ ++ + NL N PN+
Sbjct: 577 SDPSLSFSPSSSSSP-SVRPSPNLISN-PNR 605
>SB_37366| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.82)
Length = 705
Score = 31.9 bits (69), Expect = 4.4
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 1304 SVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPVNRLTPTAQNATYPIKHAANLQRNVP 1363
+VP +V +P P PP V S S S + SQNP N + PT P + + P
Sbjct: 146 NVP-SVNTPSPVV-PPSVASTSSPQSASSMSQNPTN-IDPT---QVVPPSNTTQV-FPPP 198
Query: 1364 NQYPPNHRAEINQLPT-NAYYHRLPQ 1388
N PN++ I Q N+Y RLP+
Sbjct: 199 NITHPNNQPFIPQASNFNSYSTRLPK 224
>SB_51172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 31.9 bits (69), Expect = 4.4
Identities = 26/84 (30%), Positives = 30/84 (35%), Gaps = 11/84 (13%)
Query: 1255 PTYQTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIP 1314
P Q Q + QPQY Q S PP Q + Q P+ Q Q P
Sbjct: 140 PPQQPYQGQRQPQYQPQGQA-----SNQQPPQQGQRPYQPSY--QGQPSQQQQQYQGQTP 192
Query: 1315 YTQPPPV----YSNQSNASPPNFS 1334
Y Q PP+ Y Q PP S
Sbjct: 193 YQQQPPLQRGPYLPQQYQQPPGLS 216
>SB_31796| Best HMM Match : SAP (HMM E-Value=3.5e-10)
Length = 1029
Score = 31.9 bits (69), Expect = 4.4
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 1257 YQTAQSRLQPQYNVQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSP---I 1313
Y Q +LQ + NVQ+ + T P Q P L+ Q+ S TS+ Q +SP I
Sbjct: 484 YLNLQMQLQ-RLNVQQPQVT--SVQTTSPMQQPVMLSTQQM-PSPNTSIKQEPESPNTCI 539
Query: 1314 PYTQPPPVYSNQSNASPPNFSQN 1336
QPPP + + AS P FS N
Sbjct: 540 FSQQPPPQPAIKKVASSPQFSYN 562
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 31.9 bits (69), Expect = 4.4
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 3/110 (2%)
Query: 1281 PTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPVNR 1340
P +PP P+ + P S + + SPI Y Y + PP+ + P +
Sbjct: 349 PPSPPRYPPSPPRYPSSHPRYPPSPLRYLPSPIRYPPSHSRYPSSHPRYPPSHLRYPPSS 408
Query: 1341 LTPTAQNATY---PIKHAANLQRNVPNQYPPNHRAEINQLPTNAYYHRLP 1387
L + Y P+++ + R P+ P H +L A H+LP
Sbjct: 409 LRYLPSHLRYPPPPLRYPPSPLRYPPSLSPICHHLFAIRLHLPAIRHQLP 458
Score = 31.1 bits (67), Expect = 7.6
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Query: 1281 PTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPVNR 1340
P +PP P+ Q P S + P Y PP Y + PP+ + P +
Sbjct: 300 PPSPPRYPPSLHRYPQSPLRYPPSPIRYPPLPSRYPPSPPRYPSSHPRYPPSPPRYPPSP 359
Query: 1341 LTPTAQNATYPIKHAANLQRNVPNQYPPNH 1370
+ + YP L P +YPP+H
Sbjct: 360 PRYPSSHPRYPPSPLRYLPS--PIRYPPSH 387
>SB_10587| Best HMM Match : DGCR6 (HMM E-Value=8.6e-07)
Length = 423
Score = 31.9 bits (69), Expect = 4.4
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 986 QEELQKIQN----INEVSNTNETQAPQGTLLAQLQEKRNQILKNENLTKPHQVETVNHTG 1041
+EE++K Q+ I V TNE G + Q ++ + +I KN++ +PH + V T
Sbjct: 134 KEEIEKNQHRPHHIPIVEKTNEEDKEVGRIRVQYKKHKEEIEKNQH--RPHHIPIVQKTN 191
Query: 1042 DSLVRELQAALKLKRSGSLEGQLSSPSEKTIENN----INVRNIASRFENNTQNAHPDNE 1097
+ E++ + + + ++ IE N ++ + E + + +
Sbjct: 192 EEDKEEIEKNQHRPHHIPIVEKTNEEDKEEIEKNQHRPHHIPIVEKTNEEDKEEIEKNQH 251
Query: 1098 RPH 1100
RPH
Sbjct: 252 RPH 254
>SB_32684| Best HMM Match : Extensin_2 (HMM E-Value=0.96)
Length = 201
Score = 31.5 bits (68), Expect = 5.8
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 1280 SPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQS----NASPPNFSQ 1335
SP N TP +N + S+P V SP P PP+ N + N++PP +
Sbjct: 88 SPPLMVNSTPLRVNSTP---QMVDSLPPIVNSPPPMVNSPPLMVNSTPLMVNSTPPMVNS 144
Query: 1336 NPVN-RLTPTAQNATYPIKHAANLQRN 1361
P+ TP N+T + ++ L+ N
Sbjct: 145 PPLMVNSTPLRVNSTPLMVNSTPLRVN 171
>SB_27115| Best HMM Match : SAM_1 (HMM E-Value=1.7e-08)
Length = 527
Score = 31.5 bits (68), Expect = 5.8
Identities = 30/149 (20%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Query: 1001 TNETQAPQGTLLAQLQEKRNQILKNENLTKPHQVETVNHTGDSLVRELQAALKLKRSGSL 1060
T+E TLL + I ++ + T ++++ +H+ +S+ ++ + K G +
Sbjct: 169 TSEDSVTDETLLEDEYQAMASIFESLDDTLKSKIQSCSHSKESMYENMRDIFQHKPGGVV 228
Query: 1061 EGQLSS--PSEKTIENNINVRNIASRFENNTQNAHPDNERPHISLAGMSGTRDVINCSDQ 1118
+ S E ++++ + ++ +T+ A L S D IN DQ
Sbjct: 229 QEHFGSLNVGEGLLDDDTSTEYLSMNMTGSTEAAGTGKH-----LGSPSARADKIN--DQ 281
Query: 1119 CNIGIYSRRASSSSIDAKQMDQEIADQRP 1147
+ R S +D+K DQ+ D P
Sbjct: 282 QSFSSSGRYTSKRCVDSKLADQKKKDFAP 310
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 31.5 bits (68), Expect = 5.8
Identities = 19/96 (19%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 999 SNTNETQAPQGTLLAQLQEKRNQILKNENLTKPHQVETVNHTGDSLVRELQAALKLKRSG 1058
S +N +P GTL + ++ R+ L +ENL + H +V S+ ++L R
Sbjct: 609 SASNGPASPSGTLTPEKRKARSNPLPDENLVEQHHTASVLSATQSVSTR---TVRLNRLI 665
Query: 1059 SLEGQLSSPSEKTIENNINVRNIASRFENNTQNAHP 1094
+ +L + + ++ +++ ++ +++ N P
Sbjct: 666 VAQTELQEDNAPDLGQDVQPQSVPAQSSSSSANEEP 701
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 31.5 bits (68), Expect = 5.8
Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 10/126 (7%)
Query: 1258 QTAQSRLQPQYNV-QKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYT 1316
Q S Q Q + ++ +G+Y +S + Q N + + + P P
Sbjct: 666 QPPLSEYQQQPTIFEQPLGIYSSSQSINQGQPSQGYNAQRNSATTPPPQQAYTSPPSSAP 725
Query: 1317 QPPPVYSNQSN------ASPPNFSQNPVNRLTPTAQNATYPIKHAANLQRNVPNQYPPNH 1370
PPP NQ++ P + N +PT +H N N Y P+
Sbjct: 726 APPPPQYNQASMQQLQYGGPQQYQHPHANTPSPTPHQ---QYQHPQNAGLPADNTYNPSP 782
Query: 1371 RAEINQ 1376
+ + NQ
Sbjct: 783 QGDPNQ 788
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 31.1 bits (67), Expect = 7.6
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 1269 NVQKSVGVYGTSPTA----PPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPP 1319
N+ ++ YG P PP TP L + PQ VQ +PY +PP
Sbjct: 567 NMYNAIARYGVPPQQFNQYPPGYTPPHLTRAPMGGPQGIGYPQGVQGRMPYPRPP 621
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.1 bits (67), Expect = 7.6
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 1279 TSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPV 1338
T+PT P TP + + + PTS +P P T P P Q+ +P +
Sbjct: 22 TTPT-PTKPTPTTHTPTKPSPTTPTSTAPTQTTPTP-TTPSPTAPTQTTPTPATPTPTTP 79
Query: 1339 NRLTPTAQNAT 1349
TPT +T
Sbjct: 80 TPKTPTPTTST 90
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 31.1 bits (67), Expect = 7.6
Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
Query: 1417 PYQSVSSNTSAYQNYHNPPTSYITAEYSSRFPQTNANHYNQSPYQRXXXXXXXXXXXXYN 1476
PY ++ + A NY +Y+ A ++ + N + N + Y
Sbjct: 3178 PY-AIHNYPYANHNYPYANHNYLYANHNYPYANHNYPYANHNYPYANHNYPYANHNYPYA 3236
Query: 1477 NNTYQKLNTNYYVDNASQPRAVDTRPYPPAQRPMYNQNVETSNN 1520
N+ Y N NY N + P A PY P N N +N+
Sbjct: 3237 NHNYPYANHNYPYANHNYPYANHNYPYANHNYPYANHNYPYANH 3280
>SB_563| Best HMM Match : Ank (HMM E-Value=0)
Length = 753
Score = 31.1 bits (67), Expect = 7.6
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 1268 YNVQKSVGVYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSN 1324
YN++ G T+P+A N I+ P +P+ + PIP P YSN
Sbjct: 3 YNLRDPDGEVHTNPSANGKAAIEMTQVNPIHVDQPPILPKLPELPIPVVSETPEYSN 59
>SB_193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1816
Score = 31.1 bits (67), Expect = 7.6
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 1304 SVPQNVQSPIPYTQPPPVYSNQSNASPPNFSQNPVNRLTPTAQNATYPIKHAANLQRNVP 1363
+VP +V +P P PPPV S S + SQNP N + PT P + + P
Sbjct: 436 NVP-SVNTPSPVV-PPPVAPTSSPQSASSMSQNPTN-IDPT---QVLPPSNTTQVV-PPP 488
Query: 1364 NQYPPNHRAEINQLPT-NAYYHRLPQ 1388
N P++ I Q N+Y RLP+
Sbjct: 489 NITHPSNEPFIPQASNFNSYSTRLPK 514
>SB_51186| Best HMM Match : Cornifin (HMM E-Value=0.00014)
Length = 217
Score = 31.1 bits (67), Expect = 7.6
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 1276 VYGTSPTAPPNQTPNALNGNQINQSLPTSVPQNVQSPIP---YTQPPP-VYSNQSNASPP 1331
+Y P PN + N N ++ T++P ++ + +P YT P +Y+N N
Sbjct: 110 MYTNMPNHMYTNMPNHMYTNMPNHNMYTNMPNHMYTNMPNHMYTNMPNHMYTNMPNHMYT 169
Query: 1332 NFSQNPVNRLTPTAQNATYPIKHAANLQRNVPNQYPPNH 1370
N + + P N+ ++ Q PNH
Sbjct: 170 NMPNHMYTNMPNHNMYTNMPNHMYTNMPNHIVYQPCPNH 208
>SB_40321| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 135
Score = 31.1 bits (67), Expect = 7.6
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 998 VSNTNETQAPQGTLLAQLQEKRNQILKNENLTKPHQVETVNHTGDSLVRELQ------AA 1051
++ N T APQ ++A+L + ILKN +L ++ N + ++ LQ
Sbjct: 23 MTKKNVTTAPQSRIMARLDGEMRAILKNTSLPLDAKIRQYNRVLNQYLKWLQQVKDDGGT 82
Query: 1052 LKLKRSGSLEGQLSSPS 1068
+ + S S+E L+ PS
Sbjct: 83 HRTRSSASVEPTLNLPS 99
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 31.1 bits (67), Expect = 7.6
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 729 LIRRKNRSMPDLTEGADGNKENSNKEKRVSSVDDTDVGRKTN-DDKSPLSGYLSEGHLEY 787
L+R+ R++ A+ N SNK ++D ++ N D+K ++E +E
Sbjct: 664 LVRKDARNLNGSGSDAEPNGRYSNKTPSEQTLDTRKSTKEKNPDNKEKTETKIAEPSMEV 723
Query: 788 SAASGTNPNLERSKLMRKSFHGSAGK 813
+ S ++ RSK + K F + K
Sbjct: 724 ARMSSSHAQRVRSKRLMKEFQDVSRK 749
>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 31.1 bits (67), Expect = 7.6
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 984 PLQEELQKIQNINEVSNTNETQAPQGTLLAQLQEKRNQILKNENLTKPHQVETVNHTGDS 1043
P Q++ Q Q + + + ET+ PQ Q Q++R L+N++L V +T
Sbjct: 575 PRQQKQQ--QPLQQQQSAPETRPPQ-----QPQQQREHYLQNQSL-------NVTNTQMP 620
Query: 1044 LVRELQAALKLKRSGSLEGQLSSPSEKTIENNINVRNIASRFENNTQNAHPDNERPHISL 1103
+ + ++ ++G + Q+ + + I N N +N + + ENN N + ++
Sbjct: 621 VQQGSSDNTQVSQTGDFQAQIE--TVEPIRN--NTQNNSEQAENNNNKQPQSNVQTNVDA 676
Query: 1104 A-GMSGTRDVINCSDQCNIG--IYSRRASSSSIDAKQMDQEIAD-QRPVHNT 1151
+ G+ + V+ S N G + + + SS ++++ Q D ++P NT
Sbjct: 677 SLGLQVQQVVVPLSSLVNTGSQMMNNQTSSEQVNSQVNPQMAGDTKQPQENT 728
>SB_23226| Best HMM Match : Herpes_UL43 (HMM E-Value=1.9)
Length = 749
Score = 31.1 bits (67), Expect = 7.6
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 1013 AQLQEKRNQILKNENLTKPHQVETVNHTGDSLVRELQAALKLKRSGSLEGQLSSPSEKT- 1071
A + E R Q ++L+K + TVN G + K KR+G+ + +S S T
Sbjct: 108 ALVLEPRQQSKAKQSLSKGARQSTVNEKGSNQPGIKAETSKPKRAGTFRTRRTSSSSLTD 167
Query: 1072 IENNINVRNIASRFENNTQNAHPDNERPHISLAGMSGTRDVINCSD 1117
I + I+S +N N N+ P S A ++ ++ ++ ++
Sbjct: 168 IPSPPLQTTISSPVQNVPNNLGTSNQGPLPSFASITVSKALVTSTE 213
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.129 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,899,072
Number of Sequences: 59808
Number of extensions: 2221377
Number of successful extensions: 5595
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 5429
Number of HSP's gapped (non-prelim): 193
length of query: 1614
length of database: 16,821,457
effective HSP length: 92
effective length of query: 1522
effective length of database: 11,319,121
effective search space: 17227702162
effective search space used: 17227702162
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 67 (31.1 bits)
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