GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002483-TA|BGIBMGA002483-PA|IPR011304|L-lactate
dehydrogenase
         (1614 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    29   0.75 
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    28   1.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   1.7  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           27   4.0  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           27   4.0  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          27   5.3  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    27   5.3  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     26   7.0  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         26   7.0  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         26   7.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   7.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    26   7.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    26   7.0  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 29.5 bits (63), Expect = 0.75
 Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 6/118 (5%)

Query: 385  PANGYARRAVTPGPDNDSDYMNRKVMESANILDAQAARRAPLVRSLS---TGSTSDSNER 441
            PA    RR  +   D+D      +    +       +R     R+ S   +GS S S  R
Sbjct: 1043 PATKRKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSRSR 1102

Query: 442  PRARRDSGNWSGDRNXXXXXXXXXXXXPYMYTRGRGPGSVPS---SPTRKGELSSGGS 496
             R+R  SG+  G R+                +R +  GS  S   S +R G  +S GS
Sbjct: 1103 SRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKSGSRSRSRSGSQASRGS 1160


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
            protein.
          Length = 474

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 5/48 (10%)

Query: 1277 YGTSP-TAPPNQTP----NALNGNQINQSLPTSVPQNVQSPIPYTQPP 1319
            YG  P T PP  +P    N ++G Q    + T+      +P+ Y +PP
Sbjct: 231  YGALPETPPPAYSPPEEGNTVSGGQDGNQMDTNQMHGEVAPVSYQEPP 278


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 11/77 (14%)

Query: 1275 GVYGTSPTAP----PNQTPNALNGNQINQSLPTSVPQNVQSPIPYTQPPPVYSNQSNASP 1330
            G+Y   P  P    P   P A+ G Q          Q +Q P    QPPP+        P
Sbjct: 216  GMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPI-------RP 268

Query: 1331 PNFSQNPVNRLTPTAQN 1347
            PN    P  +++P   N
Sbjct: 269  PNPMGGPRPQISPQNSN 285


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 1153 SDRSKPKKKSVSFCDQVILVSTAEDQEDDSYIPNPILERVLKSAMNKPELTT 1204
            S RS PKK+++ F D+    ST+      + +PNP+      +    P  TT
Sbjct: 908  SARSTPKKQNLKFIDEASTPSTSAMAA--TIVPNPVQASPSPATAPAPAKTT 957


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 6/133 (4%)

Query: 1313 IPYTQPPPVYSNQSNASPPNFSQNPVNRLTP----TAQNATYPIKHA--ANLQRNVPNQY 1366
            I +  P     +Q+  +  + SQ PV  L P    TA   +    H+  ++L   VP ++
Sbjct: 7    IAFMLPTGANPHQTLTTQVHPSQPPVPMLVPIPSRTASTGSASSGHSGSSSLYDRVPREH 66

Query: 1367 PPNHRAEINQLPTNAYYHRLPQXXXXXXXXXXXXXXXRQYGNTVPQSNTLPYQSVSSNTS 1426
              +        P N++Y  +                  Q+  +   S++    S+SS++S
Sbjct: 67   ATSSPYHAPPSPANSHYEPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSS 126

Query: 1427 AYQNYHNPPTSYI 1439
            +  +  + P S +
Sbjct: 127  SSFSSPDSPLSLV 139


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 10/101 (9%)

Query: 1280 SPTAPPNQTPNALNGNQINQSLPTSV-----PQNVQSPIPYTQPPPVYSNQSNASPPNFS 1334
            S T P N   NALN N +    P+ V      Q    P    Q       Q   S P + 
Sbjct: 181  SNTVPVNTQYNALNDNYVTSPQPSQVTSRQLQQQQLQPNQLHQQLQQQQQQQQLSSPCYM 240

Query: 1335 QNPVNRLTPTAQNATYPIKHAANLQRNVPNQY--PPNHRAE 1373
            +  + +  PT  N T     +  +  N+PN    PP + +E
Sbjct: 241  EATLGQQIPT--NTTIMDSVSVGVP-NIPNTETPPPGYMSE 278


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcription
            factor protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 6/86 (6%)

Query: 1251 QNTYPTYQTAQSRLQPQYNVQKSVGVY---GTSPTAPPNQ-TPN--ALNGNQINQSLPTS 1304
            QN  P ++        Q N ++S+      G SP+ P ++ +P+   L G+++ Q  P+S
Sbjct: 403  QNQCPIHRIQHCTCMLQNNARESISPASGTGMSPSYPHSEPSPDYAMLIGSRVIQRTPSS 462

Query: 1305 VPQNVQSPIPYTQPPPVYSNQSNASP 1330
             P    + I     PP    Q + +P
Sbjct: 463  SPPLTPNTICGLIAPPPQQQQQDPTP 488


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 7/79 (8%)

Query: 1296 QINQSLPTSVPQNVQSPIP-YTQPPPVYSNQSNASPPNFSQNPVNRLT----PTAQNATY 1350
            Q N S+P     N+  P   + QP P ++    + P    QNP N L     P A     
Sbjct: 504  QPNASVPM-FETNLPGPSNGWVQPVPSHTQNGPSQPQPQQQNPFNLLNFGTLPLATGDPL 562

Query: 1351 PIKHAANLQRNVPNQYPPN 1369
                 AN   N PN  PP+
Sbjct: 563  MAMSTAN-TNNQPNVGPPS 580


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 887 SPQSQNFHTVVTKAMIHQEQSPVKRDFMPPIQPSHNN 923
           SP       VV  + +H +Q P+  D   P QP H++
Sbjct: 59  SPTRDEMSVVVPISPLHIKQEPLGSDGPMPAQPPHHH 95


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 887 SPQSQNFHTVVTKAMIHQEQSPVKRDFMPPIQPSHNN 923
           SP       VV  + +H +Q P+  D   P QP H++
Sbjct: 59  SPTRDEMSVVVPISPLHIKQEPLGSDGPMPAQPPHHH 95


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 16/51 (31%), Positives = 20/51 (39%)

Query: 356 PCDTRNAPKDVVPFPAPEPRRAITPAPERPANGYARRAVTPGPDNDSDYMN 406
           P   RN P    P      RR  T   ++   GY RR+      ND+ Y N
Sbjct: 508 PRARRNPPATTRPVRHRPTRRKSTKRGKKDDKGYDRRSGKEERSNDNRYTN 558


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 431 STGSTSDSNERPRARRDSGNWSGDRNXXXXXXXXXXXXPYMYTRGRGPGSVPSSPTRKGE 490
           S+ +TS S+ +P  ++     S D              P   +      SVP+ PT  GE
Sbjct: 11  SSSTTSSSSSKPSPQQQQQLHSAD--VPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGE 68

Query: 491 LSSGGS 496
             + GS
Sbjct: 69  PRAAGS 74


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 431 STGSTSDSNERPRARRDSGNWSGDRNXXXXXXXXXXXXPYMYTRGRGPGSVPSSPTRKGE 490
           S+ +TS S+ +P  ++     S D              P   +      SVP+ PT  GE
Sbjct: 11  SSSTTSSSSSKPSPQQQQQLHSAD--VPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGE 68

Query: 491 LSSGGS 496
             + GS
Sbjct: 69  PRAAGS 74


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.129    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,559,271
Number of Sequences: 2123
Number of extensions: 65893
Number of successful extensions: 109
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 96
Number of HSP's gapped (non-prelim): 20
length of query: 1614
length of database: 516,269
effective HSP length: 73
effective length of query: 1541
effective length of database: 361,290
effective search space: 556747890
effective search space used: 556747890
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)