Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002482-TA|BGIBMGA002482-PA|IPR010994|RuvA domain 2-like,
IPR004579|DNA repair protein rad10
(278 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B5AB1 Cluster: PREDICTED: similar to excision r... 302 5e-81
UniRef50_Q292E9 Cluster: GA10163-PA; n=5; Endopterygota|Rep: GA1... 285 1e-75
UniRef50_Q7KMG7 Cluster: Nucleotide excision repair protein ERCC... 282 8e-75
UniRef50_P07992 Cluster: DNA excision repair protein ERCC-1; n=1... 262 5e-69
UniRef50_Q6NY87 Cluster: Zgc:77511; n=3; Danio rerio|Rep: Zgc:77... 261 2e-68
UniRef50_Q4RQQ8 Cluster: Chromosome 2 SCAF15004, whole genome sh... 233 3e-60
UniRef50_Q7ZYE2 Cluster: Ercc1-prov protein; n=2; Xenopus|Rep: E... 233 5e-60
UniRef50_Q4P0Z4 Cluster: Putative uncharacterized protein; n=1; ... 221 2e-56
UniRef50_Q5DBA0 Cluster: SJCHGC00905 protein; n=1; Schistosoma j... 216 6e-55
UniRef50_Q06182 Cluster: Mating-type switching protein swi10; n=... 214 2e-54
UniRef50_Q96S40 Cluster: Excision repair protein 1; n=5; Catarrh... 212 1e-53
UniRef50_Q6UIQ4 Cluster: Excision repair protein; n=4; Mammalia|... 208 1e-52
UniRef50_Q9MA98 Cluster: DNA excision repair protein ERCC-1; n=5... 202 6e-51
UniRef50_Q2UG62 Cluster: Structure-specific endonuclease ERCC1-X... 178 1e-43
UniRef50_A4RDF6 Cluster: Putative uncharacterized protein; n=4; ... 172 7e-42
UniRef50_A7F9X2 Cluster: Putative uncharacterized protein; n=1; ... 171 1e-41
UniRef50_Q0CL38 Cluster: Mating-type switching protein swi10; n=... 171 2e-41
UniRef50_Q5KFN9 Cluster: Mating-type switching protein swi10, pu... 165 1e-39
UniRef50_A6S8H4 Cluster: Putative uncharacterized protein; n=1; ... 163 6e-39
UniRef50_Q6C7S4 Cluster: Similar to sp|Q06182 Schizosaccharomyce... 162 1e-38
UniRef50_Q5CX40 Cluster: ERCC1 excision repair 1; C-terminal HhH... 151 1e-35
UniRef50_A2Z9D6 Cluster: Putative uncharacterized protein; n=2; ... 151 2e-35
UniRef50_O96136 Cluster: ERCC1 nucleotide excision repair protei... 141 2e-32
UniRef50_Q93456 Cluster: Putative uncharacterized protein; n=2; ... 120 5e-26
UniRef50_Q55GG6 Cluster: DNA excision repair protein; n=1; Dicty... 120 5e-26
UniRef50_Q6BTB0 Cluster: Similar to CA2889|IPF13628 Candida albi... 116 7e-25
UniRef50_Q5AA15 Cluster: Putative uncharacterized protein ERC1; ... 113 4e-24
UniRef50_A3GFT8 Cluster: SsDNA endonuclease and repair protein; ... 113 5e-24
UniRef50_A5DWH7 Cluster: Putative uncharacterized protein; n=1; ... 112 8e-24
UniRef50_Q8SR16 Cluster: ERCC1-LIKE DNA EXCISION REPAIR PROTEIN;... 111 2e-23
UniRef50_Q4UII7 Cluster: DNA repair protein (RAD10 homologue), p... 97 4e-19
UniRef50_A2DBF5 Cluster: DNA repair protein rad10 containing pro... 94 3e-18
UniRef50_Q75BB8 Cluster: ADL351Wp; n=1; Eremothecium gossypii|Re... 89 1e-16
UniRef50_A7TSX3 Cluster: Putative uncharacterized protein; n=1; ... 83 8e-15
UniRef50_Q6CRB9 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 81 3e-14
UniRef50_P06838 Cluster: DNA repair protein RAD10; n=3; Saccharo... 79 9e-14
UniRef50_Q00SZ4 Cluster: Nucleotide repair protein; n=1; Ostreoc... 79 1e-13
UniRef50_A7AQ89 Cluster: Putative uncharacterized protein; n=1; ... 76 1e-12
UniRef50_A4RT39 Cluster: NA excision repair protein ERCC-1-like ... 74 3e-12
UniRef50_UPI0000498D76 Cluster: DNA excision repair protein; n=1... 66 7e-10
UniRef50_Q4D929 Cluster: DNA repair protein, putative; n=2; Tryp... 52 2e-05
UniRef50_A5UMG4 Cluster: ERCC4-like helicase; n=2; Methanobacter... 50 9e-05
UniRef50_Q57V05 Cluster: DNA repair protein, putative; n=1; Tryp... 48 3e-04
UniRef50_Q8TUS6 Cluster: ERCC4-like helicase-nuclease; n=1; Meth... 43 0.007
UniRef50_A6UTA1 Cluster: DEAD/DEAH box helicase domain protein; ... 42 0.013
UniRef50_A2BL31 Cluster: Predicted ERCC4-type nuclease; n=1; Hyp... 42 0.017
UniRef50_A0RTK1 Cluster: Helicase-associated endonuclease for fo... 42 0.023
UniRef50_Q5JJ98 Cluster: Helicase-associated endonuclease for fo... 41 0.030
UniRef50_Q22RX3 Cluster: Mating-type switching protein swi10, pu... 40 0.070
UniRef50_Q9HMW5 Cluster: ATP-dependent RNA helicase homolog eIF-... 40 0.070
UniRef50_Q8R653 Cluster: Zinc protease; n=3; Fusobacterium nucle... 40 0.092
UniRef50_Q9RSQ5 Cluster: DNA ligase; n=2; Deinococcus|Rep: DNA l... 39 0.12
UniRef50_Q0F271 Cluster: Excinuclease ABC subunit C; n=1; Maripr... 39 0.16
UniRef50_A4F130 Cluster: Putative integrase for prophage CP-933U... 39 0.16
UniRef50_Q89AD1 Cluster: Probable 5'-3' exonuclease; n=1; Buchne... 39 0.16
UniRef50_Q8TZH8 Cluster: ATP-dependent RNA helicase, putative; n... 38 0.37
UniRef50_Q4JB33 Cluster: XPF/RAD1 repair endonuclease; n=4; Sulf... 38 0.37
UniRef50_Q7RL00 Cluster: Putative uncharacterized protein PY0274... 37 0.49
UniRef50_O28814 Cluster: ATP-dependent RNA helicase, putative; n... 37 0.49
UniRef50_A5YS51 Cluster: Putative uncharacterized protein; n=1; ... 37 0.49
UniRef50_Q630W7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.65
UniRef50_A5K2U3 Cluster: DNA repair endonuclease, putative; n=1;... 37 0.65
UniRef50_O27466 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 37 0.65
UniRef50_Q83CD5 Cluster: UvrABC system protein C; n=25; Gammapro... 37 0.65
UniRef50_Q1AU07 Cluster: Putative uncharacterized protein; n=1; ... 36 0.86
UniRef50_A7HJ71 Cluster: Putative uncharacterized protein; n=1; ... 36 0.86
UniRef50_A6EGW7 Cluster: Putative DNA processing Smf-like protei... 36 0.86
UniRef50_Q8NQ55 Cluster: UvrABC system protein C; n=3; Actinomyc... 36 1.1
UniRef50_O25336 Cluster: DNA ligase; n=7; Campylobacterales|Rep:... 36 1.1
UniRef50_UPI00004990DD Cluster: hypothetical protein 7.t00064; n... 36 1.5
UniRef50_A5EW70 Cluster: Excinuclease ABC, C subunit; n=1; Diche... 36 1.5
UniRef50_A3JK29 Cluster: ERCC4-like helicase-nuclease; n=1; Mari... 36 1.5
UniRef50_A0EAJ1 Cluster: Chromosome undetermined scaffold_86, wh... 36 1.5
UniRef50_A0CU34 Cluster: Chromosome undetermined scaffold_28, wh... 36 1.5
UniRef50_Q9YC15 Cluster: Repair endonuclease XPF; n=1; Aeropyrum... 36 1.5
UniRef50_UPI0001509CD5 Cluster: Zinc finger, C2H2 type family pr... 35 2.0
UniRef50_P46883 Cluster: Copper amine oxidase precursor; n=13; G... 35 2.0
UniRef50_Q6CKF9 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 35 2.6
UniRef50_Q4FQ48 Cluster: UvrABC system protein C; n=7; Pseudomon... 35 2.6
UniRef50_Q86XP1 Cluster: Diacylglycerol kinase eta; n=61; Eutele... 35 2.6
UniRef50_Q7T5J1 Cluster: Desmoplakin; n=1; Cryptophlebia leucotr... 34 3.5
UniRef50_A2SND2 Cluster: Helicase-associated endonuclease for fo... 34 3.5
UniRef50_Q8I3P4 Cluster: Putative uncharacterized protein PFE109... 34 3.5
UniRef50_Q5CXQ4 Cluster: Thioredoxin/PDI, cyanobacterial type, s... 34 3.5
UniRef50_Q54FN8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.5
UniRef50_Q4QH40 Cluster: Tubulin-tyrsoine ligase-like protein; n... 34 3.5
UniRef50_A7SIZ4 Cluster: Predicted protein; n=3; Nematostella ve... 34 3.5
UniRef50_Q58900 Cluster: Putative ATP-dependent RNA helicase MJ1... 34 3.5
UniRef50_Q2ACP1 Cluster: Competence protein ComEA helix-hairpin-... 34 4.6
UniRef50_O30253 Cluster: DNA repair protein, putative; n=1; Arch... 34 4.6
UniRef50_Q0G696 Cluster: Transcriptional regulator, putative; n=... 33 6.0
UniRef50_A2BWW3 Cluster: Helix-hairpin-helix DNA-binding motif c... 33 6.0
UniRef50_Q7RQH8 Cluster: Putative uncharacterized protein PY0111... 33 6.0
UniRef50_A0CVL6 Cluster: Chromosome undetermined scaffold_29, wh... 33 6.0
UniRef50_Q0U1E7 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 6.0
UniRef50_Q12XG3 Cluster: ERCC4-like helicase; n=1; Methanococcoi... 33 6.0
UniRef50_P41474 Cluster: Uncharacterized 21.7 kDa protein in GP4... 33 6.0
UniRef50_Q6NAL3 Cluster: UvrABC system protein C; n=38; Alphapro... 33 6.0
UniRef50_Q8G6E0 Cluster: UvrABC system protein C; n=5; Bifidobac... 33 6.0
UniRef50_Q04110 Cluster: Protein ECM11; n=2; Saccharomyces cerev... 33 6.0
UniRef50_Q75AH6 Cluster: Mitochondrial aspartate-glutamate trans... 33 6.0
UniRef50_Q4AA00 Cluster: Putative uncharacterized protein; n=3; ... 33 8.0
UniRef50_Q3AF80 Cluster: DNA repair protein RadC; n=1; Carboxydo... 33 8.0
UniRef50_A6DJX5 Cluster: SMF family protein involved in DNA upta... 33 8.0
UniRef50_A3I2H2 Cluster: DNA ligase; n=1; Algoriphagus sp. PR1|R... 33 8.0
UniRef50_A5GYL8 Cluster: Putative uncharacterized protein; n=4; ... 33 8.0
UniRef50_A7SIZ5 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.0
UniRef50_A2FMQ5 Cluster: Leucine Rich Repeat family protein; n=1... 33 8.0
UniRef50_Q8PX35 Cluster: ATP-dependent RNA helicase, EIF-4A fami... 33 8.0
UniRef50_Q6NH31 Cluster: UvrABC system protein C; n=3; Corynebac... 33 8.0
>UniRef50_UPI00015B5AB1 Cluster: PREDICTED: similar to excision
repair cross-complementing 1 ercc1; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to excision repair
cross-complementing 1 ercc1 - Nasonia vitripennis
Length = 261
Score = 302 bits (742), Expect = 5e-81
Identities = 135/210 (64%), Positives = 170/210 (80%)
Query: 43 KPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPD 102
K +++ + +L+N QRGNPLLKHITSVP+EY +I+PDY VGKT C+LFLSLRYH LNPD
Sbjct: 52 KNKNTNLNPLLINPKQRGNPLLKHITSVPYEYSEIIPDYVVGKTSCILFLSLRYHQLNPD 111
Query: 103 YIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVEN 162
YIH RLK LG Y+LRVLLVQVD+ +PH SLK+LTRIC+L D+TLMLAW+ EEA K++E
Sbjct: 112 YIHERLKTLGSSYNLRVLLVQVDVAEPHHSLKHLTRICILADLTLMLAWSAEEAGKIIET 171
Query: 163 YKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRL 222
YK YENKPPD IME+ + PHQK+INAL++++ VNKTDAMTL+ TFGT ++II+ + L
Sbjct: 172 YKAYENKPPDMIMERSDTAPHQKLINALTTVRSVNKTDAMTLLSTFGTFKDIIEAPSASL 231
Query: 223 AECPGFGITKAKKLYKALHEPFLKKGQTKD 252
A CPGFG KA++L K LHE FL++ TKD
Sbjct: 232 ALCPGFGPQKAQRLNKTLHETFLRQKNTKD 261
>UniRef50_Q292E9 Cluster: GA10163-PA; n=5; Endopterygota|Rep:
GA10163-PA - Drosophila pseudoobscura (Fruit fly)
Length = 260
Score = 285 bits (698), Expect = 1e-75
Identities = 132/213 (61%), Positives = 167/213 (78%), Gaps = 1/213 (0%)
Query: 36 TSDEATIKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEY-DDIVPDYEVGKTICLLFLSL 94
TS T+ +S H VLV+ QRGNP+LK I +VP E+ DDIVPDY VG+T C+LFLSL
Sbjct: 48 TSASITVAKPASNPHSVLVHSKQRGNPILKSIQNVPLEFRDDIVPDYVVGRTSCILFLSL 107
Query: 95 RYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPE 154
+YHNLNPDYI RLK LGK Y+LRVLLVQVD +PH +LK+LTRI LL D+T+MLAWN E
Sbjct: 108 KYHNLNPDYICQRLKALGKMYELRVLLVQVDTPEPHNALKSLTRISLLADLTMMLAWNAE 167
Query: 155 EAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENI 214
EA K++E YK +E +PPD IME++E++PHQK++ AL++IKPVNKTDA+TL++TFG L N+
Sbjct: 168 EAGKIIETYKQFEKRPPDLIMERVESNPHQKLVAALTNIKPVNKTDAVTLLQTFGNLGNV 227
Query: 215 IKVSESRLAECPGFGITKAKKLYKALHEPFLKK 247
I SE RL++ G G KAK+L+K L EPFL K
Sbjct: 228 ITASEERLSQVMGLGPRKAKRLFKTLQEPFLNK 260
>UniRef50_Q7KMG7 Cluster: Nucleotide excision repair protein ERCC1;
n=3; Diptera|Rep: Nucleotide excision repair protein
ERCC1 - Drosophila melanogaster (Fruit fly)
Length = 259
Score = 282 bits (691), Expect = 8e-75
Identities = 134/215 (62%), Positives = 167/215 (77%), Gaps = 2/215 (0%)
Query: 34 AGTSDEATIKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEY-DDIVPDYEVGKTICLLFL 92
+G+ A KP +S HCVLV+ QRGNP+LK I +VP E+ DDIVPDY VG+T C+L+L
Sbjct: 46 SGSGRPAPGKP-ASNPHCVLVHSKQRGNPILKSILNVPLEFRDDIVPDYVVGRTSCVLYL 104
Query: 93 SLRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWN 152
SL+YHNLNPDYI RLK LGK Y+LRVLLVQVD +P+ +LK+LTRI LL D+T+MLAWN
Sbjct: 105 SLKYHNLNPDYICQRLKALGKMYELRVLLVQVDTPEPNNALKSLTRISLLADLTMMLAWN 164
Query: 153 PEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLE 212
EEA K++E YK +E +PPD IME++E++PHQK++ AL++IKPVNKTDA L+ TFG L
Sbjct: 165 AEEAGKIIETYKQFEKRPPDLIMERVESNPHQKLLAALTNIKPVNKTDAAALLHTFGNLG 224
Query: 213 NIIKVSESRLAECPGFGITKAKKLYKALHEPFLKK 247
NII SE RL++ G G KAKKLYK L EPFL K
Sbjct: 225 NIINASEERLSQVMGLGPRKAKKLYKTLQEPFLSK 259
>UniRef50_P07992 Cluster: DNA excision repair protein ERCC-1; n=19;
Theria|Rep: DNA excision repair protein ERCC-1 - Homo
sapiens (Human)
Length = 297
Score = 262 bits (643), Expect = 5e-69
Identities = 115/213 (53%), Positives = 158/213 (74%), Gaps = 1/213 (0%)
Query: 34 AGTSDEATIKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLS 93
AG + +KP +K++ ++V+ QRGNP+LK + +VPWE+ D++PDY +G++ C LFLS
Sbjct: 84 AGETPNQALKP-GAKSNSIIVSPRQRGNPVLKFVRNVPWEFGDVIPDYVLGQSTCALFLS 142
Query: 94 LRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNP 153
LRYHNL+PDYIH RL+ LGK + LRVLLVQVD+KDP +LK L ++C+L D TL+LAW+P
Sbjct: 143 LRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSP 202
Query: 154 EEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLEN 213
EEA + +E YK YE KP D +MEK+E D ++ L+++K VNKTD+ TL+ TFG+LE
Sbjct: 203 EEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLTTVKSVNKTDSQTLLTTFGSLEQ 262
Query: 214 IIKVSESRLAECPGFGITKAKKLYKALHEPFLK 246
+I S LA CPG G KA++L+ LHEPFLK
Sbjct: 263 LIAASREDLALCPGLGPQKARRLFDVLHEPFLK 295
>UniRef50_Q6NY87 Cluster: Zgc:77511; n=3; Danio rerio|Rep: Zgc:77511
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 342
Score = 261 bits (639), Expect = 2e-68
Identities = 111/220 (50%), Positives = 160/220 (72%), Gaps = 1/220 (0%)
Query: 28 DEISAQAGTSDEATIKPRS-SKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKT 86
D+ + +S+ + P + ++V+ QRGNP+LK + +VPWE+ ++VPDY +G+T
Sbjct: 117 DQTKGEGQSSESFVVPPHLLGSGNSIIVSPRQRGNPILKFVRNVPWEFGEVVPDYVLGRT 176
Query: 87 ICLLFLSLRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDIT 146
C LFLS+RYHNLNP+Y+H RLK+LG+ + LR+LLVQVD+KDPH +LK L RIC++ D T
Sbjct: 177 TCALFLSVRYHNLNPNYVHERLKQLGQSFSLRILLVQVDVKDPHHALKELARICIMADCT 236
Query: 147 LMLAWNPEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIK 206
L+LAW+PEEA + +E YK YE KP D + E++E + ++ + L+++K VNKTDAMTL+
Sbjct: 237 LILAWSPEEAGRYLETYKSYEKKPADLLKEQVEKNYLSQVTDCLTTVKSVNKTDAMTLLS 296
Query: 207 TFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPFLK 246
TF +LE IIK S+ L CPG G KA++LY LH+PF+K
Sbjct: 297 TFSSLEGIIKASKEELVLCPGLGPQKARRLYDVLHQPFIK 336
>UniRef50_Q4RQQ8 Cluster: Chromosome 2 SCAF15004, whole genome
shotgun sequence; n=3; Deuterostomia|Rep: Chromosome 2
SCAF15004, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 180
Score = 233 bits (571), Expect = 3e-60
Identities = 100/180 (55%), Positives = 136/180 (75%)
Query: 59 RGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLKELGKKYDLR 118
RGNP+LK++ SVPWE+ D+VPDY +G+T C LFLSLRYHNLNP+YIH+RLK LG+ + LR
Sbjct: 1 RGNPILKYVRSVPWEFGDVVPDYVLGQTTCALFLSLRYHNLNPNYIHDRLKHLGQTFTLR 60
Query: 119 VLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKPPDRIMEKI 178
VLLVQVD+KDPH +L+ L +IC+ D TL+LAW PEEA + +E YK YE KP D + E++
Sbjct: 61 VLLVQVDVKDPHHALRELAQICVKADCTLILAWRPEEAGRYLETYKSYEKKPADALKEQV 120
Query: 179 ENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYK 238
E D K+ + L+++K +NKTDA+TL+ TF ++E I+ S+ L CPG G K ++YK
Sbjct: 121 EKDYLSKVTDCLTTVKSINKTDAITLLSTFSSVEGIMNASKEDLVLCPGLGPQKVGRIYK 180
>UniRef50_Q7ZYE2 Cluster: Ercc1-prov protein; n=2; Xenopus|Rep:
Ercc1-prov protein - Xenopus laevis (African clawed
frog)
Length = 289
Score = 233 bits (569), Expect = 5e-60
Identities = 104/182 (57%), Positives = 136/182 (74%)
Query: 51 CVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLKE 110
C+LV+ QRGN LLK++ +VPWE+ DIVPDY +G+T C LFLSLRYHNLNP+YIH+RL+
Sbjct: 99 CILVSTRQRGNSLLKYLRNVPWEFSDIVPDYILGETCCSLFLSLRYHNLNPEYIHSRLRS 158
Query: 111 LGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKP 170
LG+ + LRVLLVQVD+KDPH SLK L +IC+L+D TL+L+W+PEEAA+ +E YK YE KP
Sbjct: 159 LGQSFALRVLLVQVDVKDPHFSLKELAKICILSDCTLILSWSPEEAARYLETYKCYEQKP 218
Query: 171 PDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGI 230
D + E+ E D + L+++K VNKTD+ TL TFGTL ++ S L+ CPG G
Sbjct: 219 ADALKERTEKDFMSTMTECLTTVKYVNKTDSCTLFTTFGTLFDLANASREDLSLCPGLGP 278
Query: 231 TK 232
K
Sbjct: 279 QK 280
>UniRef50_Q4P0Z4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 334
Score = 221 bits (540), Expect = 2e-56
Identities = 98/222 (44%), Positives = 153/222 (68%), Gaps = 8/222 (3%)
Query: 31 SAQAGTSDEATIKPR-------SSKT-HCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYE 82
S +G S ++PR +++T + +LVN QRGNP+L+H+ ++ WEY DIVPDY+
Sbjct: 51 SGASGASGATVVQPRPRPLIRGAARTGNTILVNNCQRGNPVLQHMRNIGWEYADIVPDYQ 110
Query: 83 VGKTICLLFLSLRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLL 142
VG + C+LFLS+RYH L+P+Y+H R+++L Y LR+LLV D+ D A++K LT+ C++
Sbjct: 111 VGLSACVLFLSIRYHRLHPEYVHTRVQKLAHMYTLRILLVLCDVTDHQAAIKELTKTCVI 170
Query: 143 TDITLMLAWNPEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAM 202
+TLMLAW+ EEAA+ +E YK +E KPPD I E++ +D ++ N L+ ++ +N+TD +
Sbjct: 171 NKLTLMLAWSAEEAARYLETYKSFELKPPDAIKERVGDDYLSQVTNVLTQVRGINRTDVI 230
Query: 203 TLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPF 244
TL+ TFG+L+N++ + +LA CPGF + KA +L PF
Sbjct: 231 TLLSTFGSLKNVVNANVHQLAMCPGFALRKASRLNHVFTLPF 272
>UniRef50_Q5DBA0 Cluster: SJCHGC00905 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC00905 protein - Schistosoma
japonicum (Blood fluke)
Length = 355
Score = 216 bits (527), Expect = 6e-55
Identities = 102/216 (47%), Positives = 143/216 (66%), Gaps = 2/216 (0%)
Query: 34 AGTSDEATIKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLS 93
A S +P + +LVN+ QRGNP+LKHI +V WEY DI PD+ VG+ C+ FLS
Sbjct: 138 AEDSKRTQTRPTLACGQAILVNQRQRGNPVLKHIRNVAWEYADIEPDFVVGRNNCIYFLS 197
Query: 94 LRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNP 153
LRYHNLN +YI RL++ ++Y L VLLVQVD+ DP+ LK L +IC +TLMLAW
Sbjct: 198 LRYHNLNSEYIFERLRQTKQRYQLSVLLVQVDVPDPYYPLKELCKICWTEGLTLMLAWKT 257
Query: 154 EEAAKVVENYKIYENKPPDRIMEK--IENDPHQKIINALSSIKPVNKTDAMTLIKTFGTL 211
EEAA+ +E YK ENKPPD +M + D ++I+ L+S++ + K DAM+ ++ F T+
Sbjct: 258 EEAARYLEAYKALENKPPDSLMAEPATGTDYTAQVIDFLTSVRRITKADAMSAMRKFNTV 317
Query: 212 ENIIKVSESRLAECPGFGITKAKKLYKALHEPFLKK 247
+II+ +S L +CPGFG KA+KL + PF+K+
Sbjct: 318 ADIIRADQSTLEKCPGFGQLKARKLCEVFRMPFIKE 353
>UniRef50_Q06182 Cluster: Mating-type switching protein swi10; n=1;
Schizosaccharomyces pombe|Rep: Mating-type switching
protein swi10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 252
Score = 214 bits (523), Expect = 2e-54
Identities = 97/226 (42%), Positives = 153/226 (67%), Gaps = 1/226 (0%)
Query: 27 VDEISAQAGTSDEATIKPRSSKT-HCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGK 85
++E+ +AG + + T + S T H +LVN Q+GNPLL H+ +VPWEY DIVPD+ +G
Sbjct: 17 LEEVEKKAGFAQQPTPQKVSRVTAHSILVNPRQKGNPLLPHVRNVPWEYTDIVPDFVMGT 76
Query: 86 TICLLFLSLRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDI 145
IC LFLSL+YH+L+P+YI++R+ +LGK Y+LR+LL+ VD+++ AS++ L + ++
Sbjct: 77 GICSLFLSLKYHHLHPEYIYSRISKLGKSYNLRILLILVDVENHQASIQELVKTSIVNQY 136
Query: 146 TLMLAWNPEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLI 205
TL+LAW+ EEAA+ +E YK YEN P IMEK D ++ + L+SI+ +NK+D+++L+
Sbjct: 137 TLILAWSSEEAARYLETYKAYENMSPALIMEKPSTDYLSQVQSFLTSIRGINKSDSLSLL 196
Query: 206 KTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPFLKKGQTK 251
FG+LE + S L + G+G TK + +A+ +PF+ K
Sbjct: 197 SKFGSLERALVASRDELEQLEGWGPTKVNRFLEAVQQPFMSHSTIK 242
>UniRef50_Q96S40 Cluster: Excision repair protein 1; n=5;
Catarrhini|Rep: Excision repair protein 1 - Homo sapiens
(Human)
Length = 273
Score = 212 bits (517), Expect = 1e-53
Identities = 103/213 (48%), Positives = 140/213 (65%), Gaps = 25/213 (11%)
Query: 34 AGTSDEATIKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLS 93
AG + +KP +K++ ++V+ QRGNP+LK + +VPWE+ D++PDY +G++ C LFLS
Sbjct: 84 AGETPNQALKP-GAKSNSIIVSPRQRGNPVLKFVRNVPWEFGDVIPDYVLGQSTCALFLS 142
Query: 94 LRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNP 153
LRYHNL+PDYIH RL+ LGK + LRVLLVQVD+KDP +LK L ++C+L D TL+LAW+P
Sbjct: 143 LRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQALKELAKMCILADCTLILAWSP 202
Query: 154 EEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLEN 213
EEA + +E YK YE KP D +MEK+E D + +LE
Sbjct: 203 EEAGRYLETYKAYEQKPADLLMEKLEQDFVSR------------------------SLEQ 238
Query: 214 IIKVSESRLAECPGFGITKAKKLYKALHEPFLK 246
+I S LA CPG G KA++L+ LHEPFLK
Sbjct: 239 LIAASREDLALCPGLGPQKARRLFDVLHEPFLK 271
>UniRef50_Q6UIQ4 Cluster: Excision repair protein; n=4;
Mammalia|Rep: Excision repair protein - Macaca mulatta
(Rhesus macaque)
Length = 227
Score = 208 bits (508), Expect = 1e-52
Identities = 100/212 (47%), Positives = 139/212 (65%), Gaps = 25/212 (11%)
Query: 34 AGTSDEATIKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLS 93
AG + +KP +K++ ++V+ QRGNP+LK + +VPWE+ D++PDY +G++ C LFLS
Sbjct: 41 AGETPNQALKP-GAKSNSIIVSPRQRGNPVLKFVRNVPWEFGDVIPDYVLGQSTCALFLS 99
Query: 94 LRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNP 153
LRYHNL+PDYIH RL+ LGK + LRVLL+QVD+KDP +LK L ++C+L D TL+LAW+P
Sbjct: 100 LRYHNLHPDYIHGRLQSLGKNFALRVLLIQVDVKDPQQALKELAKMCILADCTLILAWSP 159
Query: 154 EEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLEN 213
EEA + +E YK YE KP D +MEK++ D + +LE
Sbjct: 160 EEAGRYLETYKAYEQKPADLLMEKLDQDFVSR------------------------SLEQ 195
Query: 214 IIKVSESRLAECPGFGITKAKKLYKALHEPFL 245
+I S LA CPG G KA++L+ LHEPFL
Sbjct: 196 LIAASREDLALCPGLGPQKARRLFDVLHEPFL 227
>UniRef50_Q9MA98 Cluster: DNA excision repair protein ERCC-1; n=5;
Magnoliophyta|Rep: DNA excision repair protein ERCC-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 410
Score = 202 bits (494), Expect = 6e-51
Identities = 99/230 (43%), Positives = 147/230 (63%), Gaps = 3/230 (1%)
Query: 50 HCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLK 109
+ +LV+ Q+GNPLLKHI +V W + DI+PDY +G+ C L+LSLRYH L+PDY++ R++
Sbjct: 124 NAILVSHRQKGNPLLKHIRNVKWVFSDIIPDYVLGQNSCALYLSLRYHLLHPDYLYFRIR 183
Query: 110 ELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENK 169
EL K + L V+L VD++D L +T+ LL D TL+ AW+ E A+ +E K+YENK
Sbjct: 184 ELQKNFKLSVVLCHVDVEDTVKPLLEVTKTALLHDCTLLCAWSMTECARYLETIKVYENK 243
Query: 170 PPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFG 229
P D I +++ D ++ ++L+SI+ VNK+D +TL TFG+L +II S LA CPG G
Sbjct: 244 PADLIQGQMDTDYLSRLNHSLTSIRHVNKSDVVTLGSTFGSLAHIIDASMEDLARCPGIG 303
Query: 230 ITKAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEE---LEKIVNENQD 276
K K+LY HEPF + + E P + +E+ E+ V E++D
Sbjct: 304 ERKVKRLYDTFHEPFKRATSSYPSVVEPPIPEAPVEKDVNSEEPVEEDED 353
>UniRef50_Q2UG62 Cluster: Structure-specific endonuclease ERCC1-XPF;
n=7; Eurotiomycetidae|Rep: Structure-specific
endonuclease ERCC1-XPF - Aspergillus oryzae
Length = 342
Score = 178 bits (434), Expect = 1e-43
Identities = 87/235 (37%), Positives = 140/235 (59%), Gaps = 3/235 (1%)
Query: 44 PRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDY 103
P S +LV+ Q+GNP+L HI +PWEY DI DY VG T C LFLSL+YH L+P+Y
Sbjct: 51 PSRSTPSAILVSTRQKGNPILNHIKLLPWEYADIPADYVVGATTCALFLSLKYHRLHPEY 110
Query: 104 IHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENY 163
I++R++ L KY LR+LL+ VD+ + SLK L++ ++ ++TL L W+ EAA +E +
Sbjct: 111 IYSRIRLLAGKYLLRILLIMVDIPNHEDSLKELSKTSIINNLTLTLCWSAPEAAHYLELF 170
Query: 164 KIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLA 223
K EN P I + + ++ +++ + +NK+DA +LI TFG+L+N I +++
Sbjct: 171 KSSENSQPTAIRTQQAQSYKESLVEFVTAPRSINKSDAASLISTFGSLQNAINAQPEQIS 230
Query: 224 ECPGFGITKAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVNENQDIS 278
PG+G K ++ A+ E F + KK P +DL ++ + + N ++S
Sbjct: 231 AVPGWGEKKVRQWCNAVREDFRVEA---SKKIAAPAKDLNSQKNNEPTSRNTEMS 282
>UniRef50_A4RDF6 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 933
Score = 172 bits (419), Expect = 7e-42
Identities = 83/212 (39%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Query: 44 PRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDY 103
P S +LV+ Q+ NP+L+ I SVPWEY DI DY +G T C LFLSL+YH L+P+Y
Sbjct: 611 PSKSSGSSILVSPRQKSNPVLEWIKSVPWEYSDIPADYVLGLTTCALFLSLKYHRLHPEY 670
Query: 104 IHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENY 163
I+ R++ L K+++R+LL VD+ + +L+ L++ L+ D+TLML W+ EAA+ +E Y
Sbjct: 671 IYTRIRNLQGKFNMRILLTMVDIPNHEEALRELSKTSLVNDVTLMLCWSSHEAARYLELY 730
Query: 164 KIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLA 223
K YE+ I +K++ ++ + +NK+DA+ L+ TFG+L N I ++A
Sbjct: 731 KSYEHASFAAIRAPPSTGYAEKLVEFVTVPRAINKSDAVALVSTFGSLRNAINADPDQVA 790
Query: 224 ECPGFGITKAKKLYKALHEPF-LKKGQTKDKK 254
G+G K K K + +PF +KK KK
Sbjct: 791 AVSGWGERKVKAWCKVVEQPFRVKKAGAGRKK 822
>UniRef50_A7F9X2 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 408
Score = 171 bits (417), Expect = 1e-41
Identities = 86/231 (37%), Positives = 136/231 (58%), Gaps = 1/231 (0%)
Query: 42 IKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNP 101
I RSS + + V+ Q+GNP+L ++ S PWEY DI DY +G T C LFLSL+YH L+P
Sbjct: 68 IASRSSGS-TIQVSLRQKGNPILTNLKSFPWEYSDIPADYVLGATTCALFLSLKYHRLHP 126
Query: 102 DYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVE 161
+YI+NR+K L KY+LR+LL VD+ + SLK L++ L+ ++T+ML W+ EAA+ +E
Sbjct: 127 EYIYNRIKGLQGKYNLRILLTMVDIGNHEESLKELSKTSLVNNVTVMLCWSAPEAARYLE 186
Query: 162 NYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESR 221
YK YE+ P I K+++ ++ + +NKTDA+ L+ FG+++N I
Sbjct: 187 LYKSYEHANPSAIKGVESKSYGDKMVDFITVPRNINKTDAVALVDAFGSIKNAINARPEE 246
Query: 222 LAECPGFGITKAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVN 272
+A G+G K +K + EPF + + + + E LE +++
Sbjct: 247 IAVVNGWGEKKVRKWCGIVDEPFRARKAARRGLSSRETTENSAERLEGVLD 297
>UniRef50_Q0CL38 Cluster: Mating-type switching protein swi10; n=2;
Pezizomycotina|Rep: Mating-type switching protein swi10
- Aspergillus terreus (strain NIH 2624)
Length = 334
Score = 171 bits (416), Expect = 2e-41
Identities = 79/201 (39%), Positives = 125/201 (62%)
Query: 44 PRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDY 103
P + +LV+ Q+GNP+L I VPWEY DI DY VG T C LFLSL+YH L+P+Y
Sbjct: 50 PNRTAPSAILVSTRQKGNPILDFIKIVPWEYADIPADYVVGTTTCALFLSLKYHRLHPEY 109
Query: 104 IHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENY 163
I++R+++L KY LR+LL+ VD+ + SLK L++ L+ ++TL+L W+ EAA +E +
Sbjct: 110 IYSRIRQLAGKYLLRILLIIVDIPNHEDSLKELSKTSLVNNLTLVLCWSAPEAAHYLELF 169
Query: 164 KIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLA 223
K E P I + + ++ +++ + +NK+DA +LI TFG+L+N + +++
Sbjct: 170 KSSEKSQPTAIRTQQAQSYKESLVEFVTTPRSINKSDAASLISTFGSLQNAVNAQPEQIS 229
Query: 224 ECPGFGITKAKKLYKALHEPF 244
PG+G K +K A+ E F
Sbjct: 230 AVPGWGEKKVRKWCNAVREDF 250
>UniRef50_Q5KFN9 Cluster: Mating-type switching protein swi10,
putative; n=2; Filobasidiella neoformans|Rep:
Mating-type switching protein swi10, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 390
Score = 165 bits (401), Expect = 1e-39
Identities = 82/218 (37%), Positives = 131/218 (60%), Gaps = 3/218 (1%)
Query: 43 KPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPD 102
+P +SK + N R NP+L I +V E DIV DY+VG +LFLSL+YH L+P+
Sbjct: 97 RPAASKNSIIY---NARRNPVLSAIRNVGIEVGDIVADYQVGAHNGVLFLSLKYHRLHPE 153
Query: 103 YIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVEN 162
YIH R++++ Y+ RV+LV D+ + H SL+ LT+I ++ + T+ +AW+ EE A+ +
Sbjct: 154 YIHQRIEKMKNMYNFRVILVLCDVNEHHQSLRELTKIAIINEFTVFVAWSNEEVAQYLVT 213
Query: 163 YKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRL 222
+K +E+K D + E+++ H ++ + L+S K VNKTDA L FG+ E+I + S L
Sbjct: 214 FKQFEHKSADTLKERVQQTYHDQLAHVLTSGKKVNKTDADNLAAEFGSFESISRKSAKSL 273
Query: 223 AECPGFGITKAKKLYKALHEPFLKKGQTKDKKDEFPDE 260
+ G G TK L A +PFL G + ++++ E
Sbjct: 274 SNVKGLGATKVTSLIDAFTKPFLVGGLRRPEREKTAQE 311
>UniRef50_A6S8H4 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 387
Score = 163 bits (395), Expect = 6e-39
Identities = 80/203 (39%), Positives = 123/203 (60%), Gaps = 1/203 (0%)
Query: 42 IKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNP 101
I RSS + + V+ Q+GNP+L ++ S PWEY DI+ DY +G T C LFLSL+YH L+P
Sbjct: 69 IASRSSGSS-IQVSLRQKGNPILTNLKSFPWEYSDILADYVLGTTTCALFLSLKYHRLHP 127
Query: 102 DYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVE 161
+YI+NR+K L KY+LRVLL VD+ + SLK L++ L+ ++T++L W+ EAA+ +E
Sbjct: 128 EYIYNRIKGLQGKYNLRVLLTMVDIGNHEESLKELSKTSLVNNVTVILCWSALEAARYLE 187
Query: 162 NYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESR 221
YK YE+ I K+++ ++ + +NK DA+ L+ FG++ I
Sbjct: 188 LYKSYEHANASAIKGVESKSYGDKMVDFITVPRSINKRDAVALVDAFGSIRGAINARPEE 247
Query: 222 LAECPGFGITKAKKLYKALHEPF 244
+A G+G K +K + EPF
Sbjct: 248 IAVVDGWGEKKVRKWCGVVDEPF 270
>UniRef50_Q6C7S4 Cluster: Similar to sp|Q06182 Schizosaccharomyces
pombe Mating-type switching protein swi10; n=1; Yarrowia
lipolytica|Rep: Similar to sp|Q06182 Schizosaccharomyces
pombe Mating-type switching protein swi10 - Yarrowia
lipolytica (Candida lipolytica)
Length = 370
Score = 162 bits (393), Expect = 1e-38
Identities = 80/224 (35%), Positives = 132/224 (58%), Gaps = 4/224 (1%)
Query: 27 VDEISAQAGTSDEATIKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYD--DIVPDYEVG 84
+ A A A + R + +LVNKNQRGN +L +I VPWEY D+V DY G
Sbjct: 144 IKRAEAAAVAEPTAPVVSRQRRIPAILVNKNQRGNKVLDYIKDVPWEYGAGDMVADYVTG 203
Query: 85 KTICLLFLSLRYHNLNPDYIHNRLKELGK-KYDLRVLLVQVDLKDPHASLKNLTRICLLT 143
T C+LFLS++YH++ P+YI+ ++ +L K ++DL+VLLV +D ++ A+++ LTR +
Sbjct: 204 STSCVLFLSIKYHSIKPEYIYRKIAKLQKQQFDLKVLLVMIDKENHEAAIRELTRASMRH 263
Query: 144 DITLMLAWNPEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMT 203
D+ +++AW+ E+ + K E I D ++ + LS++K +NK+DA+
Sbjct: 264 DLAILVAWSNEDCGNYISKLKSLETATVKLIEGSKSKDYTSRLADVLSNVK-LNKSDALN 322
Query: 204 LIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPFLKK 247
L T+ +L+N I R++E GFG TK K+ + + +PF+ K
Sbjct: 323 LSTTYKSLKNAILDDSERISEINGFGPTKVKRWNQTMRDPFIYK 366
>UniRef50_Q5CX40 Cluster: ERCC1 excision repair 1; C-terminal HhH
domain; n=3; Cryptosporidium|Rep: ERCC1 excision repair
1; C-terminal HhH domain - Cryptosporidium parvum Iowa
II
Length = 240
Score = 151 bits (367), Expect = 1e-35
Identities = 71/196 (36%), Positives = 120/196 (61%), Gaps = 3/196 (1%)
Query: 52 VLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLKEL 111
++ + QRGNP+L H+ +VP+++ +IVPD+ VGK ++F+S++YH L+ Y+ R++ L
Sbjct: 42 IIASTRQRGNPILAHVCNVPYDFQNIVPDFLVGKYDAVVFISIKYHKLHNQYLRKRIESL 101
Query: 112 GKKYDLRVLLVQVDLKDP---HASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYEN 168
K Y +R+LL VD+ A++ +T IC ++TL LAW+P+EA ++E K +EN
Sbjct: 102 QKNYKVRILLCLVDIPPSGAIDAAILEVTDICFDLNMTLFLAWSPKEAGHILETLKSHEN 161
Query: 169 KPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGF 228
+ I + D +I +ALSS+ +NKTD+ L+K FG++ ++ SE L++ G
Sbjct: 162 SSSEIIRGGLSLDLFSRIRDALSSLPRINKTDSENLLKHFGSISKVVNASEEELSKIQGI 221
Query: 229 GITKAKKLYKALHEPF 244
G KAK + + F
Sbjct: 222 GPIKAKVISEIFSTEF 237
>UniRef50_A2Z9D6 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 339
Score = 151 bits (366), Expect = 2e-35
Identities = 70/152 (46%), Positives = 99/152 (65%)
Query: 93 SLRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWN 152
SLRYH L+PDY++ R++EL K + LRV+L +D++D L +TR LL D TL+ W+
Sbjct: 90 SLRYHLLHPDYLYYRIRELQKNFKLRVILCHIDVEDVVKPLHEVTRTSLLHDCTLLCGWS 149
Query: 153 PEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLE 212
EE + +E K+YENK D I E +END ++ +AL+SI+ VNKTD +TL +FG+L
Sbjct: 150 LEECGRYLETIKVYENKSADSIREHMENDYLSRLTHALTSIRHVNKTDVVTLGSSFGSLS 209
Query: 213 NIIKVSESRLAECPGFGITKAKKLYKALHEPF 244
++ S LA CPG G K K+L+ HEPF
Sbjct: 210 QVMNASMEELARCPGIGERKVKRLHDTFHEPF 241
>UniRef50_O96136 Cluster: ERCC1 nucleotide excision repair protein,
putative; n=5; Plasmodium|Rep: ERCC1 nucleotide excision
repair protein, putative - Plasmodium falciparum
(isolate 3D7)
Length = 242
Score = 141 bits (341), Expect = 2e-32
Identities = 67/194 (34%), Positives = 119/194 (61%), Gaps = 1/194 (0%)
Query: 52 VLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLKEL 111
++++ Q+ NP++K I V +++++I+PD+ VGK LF+S++YH L +Y+ R++ L
Sbjct: 48 LIISLRQKLNPVIKKIKRVRYKFNNIIPDFLVGKNNACLFISMKYHRLRSNYLKARIETL 107
Query: 112 GKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKPP 171
KY+ R+LL VD+++ SL + ++ ++TL+L W+ EE A+V+E+++IYE K
Sbjct: 108 SNKYNNRILLCLVDMENIENSLGEINQLSFSFNMTLILCWSNEECARVIEDFRIYEKKIS 167
Query: 172 DRIMEKI-ENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGI 230
I +KI ++ +KI L I+ ++ TD +TL F +NII+ + L C G GI
Sbjct: 168 YIIKKKISSSNQEEKIHELLKKIRCIHTTDCITLTTKFKNFKNIIQAKKEDLISCSGLGI 227
Query: 231 TKAKKLYKALHEPF 244
K + L ++PF
Sbjct: 228 KKIQALMATFNDPF 241
>UniRef50_Q93456 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 262
Score = 120 bits (288), Expect = 5e-26
Identities = 66/202 (32%), Positives = 109/202 (53%), Gaps = 12/202 (5%)
Query: 52 VLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLK-E 110
V+ + Q GNP+LK++ +V +E+ DI PD+E G T +++LS +YH +P+Y++ R+
Sbjct: 52 VVNRRRQEGNPVLKYVRNVRYEWGDIGPDFECGPTFGVVYLSFKYHKQHPEYVYTRINGN 111
Query: 111 LGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKP 170
+Y +VLL ++++P L+ L IC T ++ + EEAA+ +E +K + K
Sbjct: 112 AENRYRNKVLLGYCNMEEPRHVLRELNMICFREAWTFVVVYTVEEAAEYIELFKTTQKKE 171
Query: 171 -----------PDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSE 219
D M + I L++ + + KTDA L+ FGTL+ I SE
Sbjct: 172 ITIKKKAIDDGGDSSMSDERRRNREAAIGFLTAARSITKTDADRLLFHFGTLQAISTASE 231
Query: 220 SRLAECPGFGITKAKKLYKALH 241
+ ++ CPG G KAK L+ LH
Sbjct: 232 TSISACPGVGPIKAKNLHSFLH 253
>UniRef50_Q55GG6 Cluster: DNA excision repair protein; n=1;
Dictyostelium discoideum AX4|Rep: DNA excision repair
protein - Dictyostelium discoideum AX4
Length = 514
Score = 120 bits (288), Expect = 5e-26
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 52 VLVNKNQRGNPLLKHIT-SVPWEYDDI-VPDYEVGKTICLLFL-SLRYHNLNPDYIHNRL 108
+ N QRG+ ++ + ++ EY ++ PD+ + + +L SL+ H NP+ I +R+
Sbjct: 217 IYANSKQRGSLMMNSFSKNIIIEYSELQYPDFILNSNTLVFYLPSLKTHRDNPNLIQDRI 276
Query: 109 KELGK------KYDLRVLLVQVDLKDP---HASLKNLTRICLLTDITLMLAWNPEEAAKV 159
K L + LR+LLV DL D + L I + TL++ W+ EAAK
Sbjct: 277 KGLSTLMTNSDSFTLRILLVFADLSDSDNCEQFINELNLIAIKLQFTLIVCWSQIEAAKY 336
Query: 160 VENYKIYENKPPDRIMEK---IENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIK 216
+E YK + N+ PD I + IE K L+SIK VNKTDA TL+K F T++ I
Sbjct: 337 LEAYKTFNNRAPDPIKARAQPIELGGKSKNEQVLTSIKSVNKTDATTLLKNFQTMQQIFT 396
Query: 217 VSESRLAECPGFGITKAKKLYKALHEPFLKKGQTK 251
++ L++ PGFG K +K Y +++PF K TK
Sbjct: 397 CQKTTLSKLPGFGPVKVQKFYNTINQPFKTKPSTK 431
>UniRef50_Q6BTB0 Cluster: Similar to CA2889|IPF13628 Candida
albicans IPF13628 putative DNA repair protein; n=2;
Saccharomycetaceae|Rep: Similar to CA2889|IPF13628
Candida albicans IPF13628 putative DNA repair protein -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 340
Score = 116 bits (279), Expect = 7e-25
Identities = 72/214 (33%), Positives = 117/214 (54%), Gaps = 20/214 (9%)
Query: 52 VLVNKNQRGNPLLKH--ITSVPWEYD-DIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRL 108
V V+++Q+GNPLL + + S+PW Y+ I+ DY + T+ +LFLSL+YH L+P+YI RL
Sbjct: 121 VQVSQSQKGNPLLTNSLMKSIPWSYNGSILSDYYINPTLQILFLSLKYHKLHPEYIWQRL 180
Query: 109 KELGKKYD---------LRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKV 159
K+L K LR+LLV VD+ L+ L C+ D++L+LAW+ EEA
Sbjct: 181 KKLNKGSTIVDTSNDRVLRLLLVVVDIDAHQEILRKLLNFCIKQDLSLVLAWSFEEAGNY 240
Query: 160 V---ENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIK 216
+ + Y++ +K I + +I+ L+ I+ +NKTD++ L+ G+++NI+
Sbjct: 241 IGFCKQYELSSSKVKSAIKGTKSLEYQACVIDTLTGIRSINKTDSVKLLANCGSVKNIVL 300
Query: 217 VS-----ESRLAECPGFGITKAKKLYKALHEPFL 245
S + L G G K + EPF+
Sbjct: 301 QSCKSNEDGGLNNIQGLGSRKLLNMRSVFLEPFI 334
>UniRef50_Q5AA15 Cluster: Putative uncharacterized protein ERC1;
n=1; Candida albicans|Rep: Putative uncharacterized
protein ERC1 - Candida albicans (Yeast)
Length = 338
Score = 113 bits (273), Expect = 4e-24
Identities = 75/232 (32%), Positives = 123/232 (53%), Gaps = 27/232 (11%)
Query: 41 TIKPRSSKTHC-----VLVNKNQRGNPLLKH--ITSVPWEYD-DIVPDYEVGKTICLLFL 92
++KP + +T +LV+++Q GNPLL + + PW +D ++ DY + ++FL
Sbjct: 100 SVKPSTKRTQTSGPSDILVSRSQEGNPLLSTPIMQATPWSFDKSLLSDYYINPKFQIIFL 159
Query: 93 SLRYHNLNPDYIHNRLKELGKKYD---------LRVLLVQVDLKDPHASLKNLTRICLLT 143
+L+YH L+P++I NR K+L + LRVLLV VD+ L+ L+ C+
Sbjct: 160 TLKYHKLHPEHIWNRWKKLNQGSSTVHTRGDDALRVLLVVVDVDSHQDLLRKLSDFCIKH 219
Query: 144 DITLMLAWNPEEAAKVVENYKIYENKP--PDRIMEKIE-NDPHQKIINALSSIKPVNKTD 200
D++L+LAW+ EEAA + K + P +I+E + +D + ++ A + IK VNKTD
Sbjct: 220 DLSLVLAWSYEEAANYIALCKQLDKAPLKGRKIIEGTKGSDYNSSVVKAFTGIKSVNKTD 279
Query: 201 AMTLIKTFGTLENIIKVSESR-------LAECPGFGITKAKKLYKALHEPFL 245
L+ +++ I+ S LA PG G K + L K EPF+
Sbjct: 280 VSNLLANCKSVKEIVLQSCQNDNDDGIGLASIPGLGAKKLENLKKVFSEPFI 331
>UniRef50_A3GFT8 Cluster: SsDNA endonuclease and repair protein;
n=2; Pichia stipitis|Rep: SsDNA endonuclease and repair
protein - Pichia stipitis (Yeast)
Length = 406
Score = 113 bits (272), Expect = 5e-24
Identities = 86/248 (34%), Positives = 132/248 (53%), Gaps = 25/248 (10%)
Query: 52 VLVNKNQRGNPLLKH--ITSVPWEYD-DIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRL 108
+LVN++Q GNPLLK + PW D DI+ DY + + +LFLSL+YH L P+Y+ RL
Sbjct: 151 ILVNRSQIGNPLLKESLMRITPWRQDNDILSDYYISPMLQILFLSLKYHKLKPEYVWTRL 210
Query: 109 KELG--------KKYD--LRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAK 158
K+L + D LRVLLV D+ +++L+ C+ D++L++A + EEA
Sbjct: 211 KKLNGGSSSVNVNRNDKVLRVLLVVNDVDSHQDLVRDLSGFCIRNDLSLVIASSFEEAGN 270
Query: 159 -VVENYKIYEN--KPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENII 215
VV+ K Y+ K I D + ++ A++ I+ +NKTD L+ F +++ II
Sbjct: 271 YVVQAKKSYDAPVKSKGGIRGMRGLDYNSSVLEAMTGIQRINKTDVSNLLANFKSVKEII 330
Query: 216 -----KVSESRLAECPGFGITKAKKLYKALHEPFL-KKGQTKDKKDEFPDEDLTLEELEK 269
+ SESRL G G K + L + EPF+ K K + E ED +E +K
Sbjct: 331 LQGAHEDSESRLGMIGGLGAAKIRNLRRVFLEPFIYNKQYEKLSEIEKNGED---QEDQK 387
Query: 270 IVNENQDI 277
+N Q+I
Sbjct: 388 NLNHLQEI 395
>UniRef50_A5DWH7 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 399
Score = 112 bits (270), Expect = 8e-24
Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 15/179 (8%)
Query: 52 VLVNKNQRGNPLLKH--ITSVPWEYDDIV-PDYEVGKTICLLFLSLRYHNLNPDYIHNRL 108
+LV+K+Q NPLL + + PW +D ++ DY + T +LFLSL+YH L P+YI RL
Sbjct: 161 ILVHKSQEKNPLLSDSMMKTTPWVFDSLILSDYYINPTFQILFLSLKYHKLRPEYIWTRL 220
Query: 109 KELGK-------KYD--LRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKV 159
K+L K + D LRVLLV VD+ L+ L+ C+ D++LMLAW+ EEA
Sbjct: 221 KKLHKGSSVIENRNDKVLRVLLVVVDIDSHQEPLRKLSDFCIKHDLSLMLAWSFEEAGNY 280
Query: 160 VENYKIYENKP---PDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENII 215
+ K ++N P D I D + ++ A +++K VNKTD L+ + +++ II
Sbjct: 281 IALGKHFDNAPQKSKDSIKGFRGADYNSSVVEAFTTVKAVNKTDVSNLLANYKSVKEII 339
>UniRef50_Q8SR16 Cluster: ERCC1-LIKE DNA EXCISION REPAIR PROTEIN;
n=1; Encephalitozoon cuniculi|Rep: ERCC1-LIKE DNA
EXCISION REPAIR PROTEIN - Encephalitozoon cuniculi
Length = 187
Score = 111 bits (267), Expect = 2e-23
Identities = 64/194 (32%), Positives = 110/194 (56%), Gaps = 10/194 (5%)
Query: 52 VLVNKNQRGNPLLKHITSVPWEYDD-IVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLKE 110
+ V+ Q+GN +L ++++ W YD+ I PDYE+ ++ LLFLSLR+H+ P+YIH R+ +
Sbjct: 2 IKVSPLQKGNSVLGYLSNTSWHYDNSITPDYEINSSVALLFLSLRFHSCKPEYIHKRISK 61
Query: 111 LGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKP 170
L K Y RVLLV VD+ P+ S K + + T +T++L ++ EE ++ ++ + I +
Sbjct: 62 L-KPYKTRVLLVHVDI--PNYS-KMIRELFETTSLTMVLGFSVEECSRYIQGFNIAGRRS 117
Query: 171 PDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGI 230
D ++ + D L + VNK+DA ++ GTL+ S + G G
Sbjct: 118 ID-VIRRGSCDGE----GFLCTFPKVNKSDAQQILGDCGTLQRFFGRSSGEMERIQGLGK 172
Query: 231 TKAKKLYKALHEPF 244
+KA+++ K L+ F
Sbjct: 173 SKAEEIIKYLNMQF 186
>UniRef50_Q4UII7 Cluster: DNA repair protein (RAD10 homologue),
putative; n=2; Theileria|Rep: DNA repair protein (RAD10
homologue), putative - Theileria annulata
Length = 216
Score = 97.1 bits (231), Expect = 4e-19
Identities = 60/205 (29%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 52 VLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLKEL 111
++++ QR NP+L+ I +VP+ DI PD+ + I +LFLSL+YH +N +YI NRL+ L
Sbjct: 12 LIISPRQRKNPILRFIKNVPYIEGDIAPDFIISSDIYVLFLSLKYHRVNINYIKNRLESL 71
Query: 112 GKKYDLRVLLV--QVDLKDPHASLKNL-----TRICLLT-----DITLMLAWNPEEAAKV 159
+Y ++ L + Q+D+ D + L T + LLT ++L+WN E+A +
Sbjct: 72 -SQYKIKNLFIICQIDVSDYNQLLSKFLDLQWTIVNLLTITFGYGCKILLSWNARESAAI 130
Query: 160 VENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSE 219
VE + + + I +K + + N L +I+ +N D + + + TL+ I+
Sbjct: 131 VEILNLNRYRGIESISKKTYMSHRESVTNLLLNIRSLNNNDVNFICEKYKTLKEIMHFDP 190
Query: 220 SRLAECPGFGITKAKKLYKALHEPF 244
+ + G G K + L A F
Sbjct: 191 KTVMDIKGLGQKKVEALSAAFTNNF 215
>UniRef50_A2DBF5 Cluster: DNA repair protein rad10 containing
protein; n=1; Trichomonas vaginalis G3|Rep: DNA repair
protein rad10 containing protein - Trichomonas vaginalis
G3
Length = 196
Score = 94.3 bits (224), Expect = 3e-18
Identities = 53/195 (27%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Query: 52 VLVNKNQRGNPLLKHITSVP--WEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLK 109
++++ Q+ NP+++ + +P W DD DY VG I +LFLSL++H P Y+ R+K
Sbjct: 5 IVISNRQKDNPMIELLKGIPCNWIEDDCA-DYIVGSDIGVLFLSLKFHRQYPRYLEERVK 63
Query: 110 ELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENK 169
+ + RVLL VD++DP ++ LTR + +TL+LA+ +E A+ + + ++
Sbjct: 64 KFQGNFKSRVLLTLVDVEDPDLAISKLTRTAQGSYMTLVLAFKYDEVARWLISMYNTQDA 123
Query: 170 PPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFG 229
D + E P + +N L ++ +++ +A L+ T+G++ + S+ + +
Sbjct: 124 ISDELKASNET-PFETGVNCLHAL-GLSRREAEELLTTYGSIYKCLTTSKEEIMKTTSLS 181
Query: 230 ITKAKKLYKALHEPF 244
K +Y+A+ F
Sbjct: 182 AKKVDMIYEAIRSQF 196
>UniRef50_Q75BB8 Cluster: ADL351Wp; n=1; Eremothecium gossypii|Rep:
ADL351Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 199
Score = 89.0 bits (211), Expect = 1e-16
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 14/134 (10%)
Query: 43 KPRSSKTHCVLVNKNQRGNPLLKHITSVPWEY------DDIVPDYEV-GKTICLLFLSLR 95
+PRS + +LV+ +Q+GNPLLK + S W Y + + DY+V G+ + +FLSL+
Sbjct: 73 RPRSGQGRTILVSTSQKGNPLLKGLASTNWTYVKSSGTEKVYYDYQVQGRKV--VFLSLK 130
Query: 96 YHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEE 155
YH L P+YI +L+ GK +LL VD++D LK L + + T++LA+N E+
Sbjct: 131 YHKLRPEYIDQKLRPFGKTQG-NILLCVVDIEDSEDILKELNKTTMFNGFTMLLAFNFEQ 189
Query: 156 AAKVVENYKIYENK 169
AAK Y ++ NK
Sbjct: 190 AAK----YLVFLNK 199
>UniRef50_A7TSX3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 233
Score = 83.0 bits (196), Expect = 8e-15
Identities = 49/116 (42%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 52 VLVNKNQRGNPLLKHITSVPWEY------DDIVPDYEVGKTICLLFLSLRYHNLNPDYIH 105
VLVN Q+ NPLL H+ + W Y + I DY V K +LFL+L YH L DYI
Sbjct: 116 VLVNTTQKENPLLNHLKNTNWRYISSSGGNKIYYDYFV-KQRAVLFLTLSYHKLYADYIS 174
Query: 106 NRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVE 161
R+ L K D VL+ VD + SL+ +T++C+ TL+LA+N E+AAK +E
Sbjct: 175 RRMIPLSKN-DNNVLIFIVDDSNSEDSLREITKMCMFNGFTLLLAFNFEQAAKYIE 229
>UniRef50_Q6CRB9 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 233
Score = 81.0 bits (191), Expect = 3e-14
Identities = 46/136 (33%), Positives = 77/136 (56%), Gaps = 10/136 (7%)
Query: 30 ISAQAGTSDEATIKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVP------DYEV 83
I Q E++ +SS + + V+ +Q GNPLLK + +V W Y P DY++
Sbjct: 94 IHNQKKAVQESSFADKSSSSKTMFVSSSQTGNPLLKSLVNVNWRYVKSTPTTQVHYDYQI 153
Query: 84 -GKTICLLFLSLRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLL 142
G+ + +FLSL+YH L+P+YI +L K+ + VLL VD+++ L+ L ++C+
Sbjct: 154 RGRNV--IFLSLKYHKLHPEYIGKKLLPF-KRTEGNVLLCVVDVENSEDILRELNKVCMF 210
Query: 143 TDITLMLAWNPEEAAK 158
T++LA+ E+A K
Sbjct: 211 QGFTILLAFTFEQAGK 226
>UniRef50_P06838 Cluster: DNA repair protein RAD10; n=3;
Saccharomycetales|Rep: DNA repair protein RAD10 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 210
Score = 79.4 bits (187), Expect = 9e-14
Identities = 49/124 (39%), Positives = 73/124 (58%), Gaps = 12/124 (9%)
Query: 45 RSSKTHCVLVNKNQRGNPLLKHITSVPWEY------DDIVPDYEV-GKTICLLFLSLRYH 97
R KT VLVN Q+ NPLL H+ S W Y + I DY V G+++ LFL+L YH
Sbjct: 88 RPGKT--VLVNTTQKENPLLNHLKSTNWRYVSSTGINMIYYDYLVRGRSV--LFLTLTYH 143
Query: 98 NLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAA 157
L DYI R++ L + + +L+ VD + +L ++T++C+ TL+LA+N E+AA
Sbjct: 144 KLYVDYISRRMQPLSRNEN-NILIFIVDDNNSEDTLNDITKLCMFNGFTLLLAFNFEQAA 202
Query: 158 KVVE 161
K +E
Sbjct: 203 KYIE 206
>UniRef50_Q00SZ4 Cluster: Nucleotide repair protein; n=1;
Ostreococcus tauri|Rep: Nucleotide repair protein -
Ostreococcus tauri
Length = 204
Score = 79.0 bits (186), Expect = 1e-13
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Query: 57 NQRGNPLLK-HITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLKELGKKY 115
N R PL ++ V + Y+++ D+ G + +L+ +L +LN + +L +L
Sbjct: 12 NSRSAPLFPLNLLKVKYSYENLKCDFVCGH-VSILYCTLSALSLNEYCLKQKLLQLSVNR 70
Query: 116 DLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKPPDRIM 175
V+L VD +D L +L ++C+ + L+ + +EAA + + + +
Sbjct: 71 SSVVVLCLVDSEDGMQILTSLNKLCVCHNAVLICTYALDEAAAYLHALCVLSQETSEP-- 128
Query: 176 EKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKK 235
+N P Q + + LSSI+ +NK DA ++ + +I + R ++CPG G TKA+
Sbjct: 129 ---KNTPDQDVYSILSSIRGINKVDAKSICHNSRSFADICASTLKRNSDCPGVGPTKAQN 185
Query: 236 LYKALHEPFL 245
L K L +PF+
Sbjct: 186 LRKTLQKPFM 195
>UniRef50_A7AQ89 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 148
Score = 75.8 bits (178), Expect = 1e-12
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 103 YIHNRLKELGKKYDLR--VLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVV 160
YI RLK L + Y +R ++ QVD+ +P + LT I ++L+W P E+A ++
Sbjct: 5 YIITRLKHL-RSYKVRNPFIICQVDIAEPQEEISELTIITFTLGYRILLSWGPRESATIL 63
Query: 161 ENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSES 220
E K+ +K + + K E + + +++I+ VN TDA+ + +T T + I++ +
Sbjct: 64 EILKLDGHKGLEFLNRKEEKTQLETVQGIIAAIRNVNSTDAVKISRTASTFKEILRCTAD 123
Query: 221 RLAECPGFGITKAKKLYKALHEPF 244
L PG G K + + A ++ F
Sbjct: 124 TLGGIPGLGKRKVESIISAFNDSF 147
>UniRef50_A4RT39 Cluster: NA excision repair protein ERCC-1-like
protein; n=1; Ostreococcus lucimarinus CCE9901|Rep: NA
excision repair protein ERCC-1-like protein -
Ostreococcus lucimarinus CCE9901
Length = 212
Score = 74.1 bits (174), Expect = 3e-12
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 52 VLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLKEL 111
+LVN + +PLL + V + ++I D+ T +++ +LR H LN D RLK+
Sbjct: 9 LLVNVLHKTHPLLA-LLEVGYRLENIDCDFIYEHT-SIVYCTLRLHTLNADLSTQRLKKA 66
Query: 112 GKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKPP 171
V+L VD +D +L +L R+C ++ L+ + EA + +
Sbjct: 67 SSVLANVVVLCLVDSEDSFQALISLNRVCAASNCVLVCVYTLREAISYIHALCAATARK- 125
Query: 172 DRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGIT 231
D I + + + LSSI+ +NK D L + + ++ K + L++CPG G T
Sbjct: 126 DTSTTMISD-----VCSILSSIRGINKLDVHALCHNYCSFSDLCKSNARSLSDCPGVGAT 180
Query: 232 KAKKLYKALHEPFL 245
KA+ L +AL +P +
Sbjct: 181 KAQILRQALQKPIM 194
>UniRef50_UPI0000498D76 Cluster: DNA excision repair protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA excision repair
protein - Entamoeba histolytica HM-1:IMSS
Length = 238
Score = 66.5 bits (155), Expect = 7e-10
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 10/203 (4%)
Query: 50 HCVLVNKNQRGNPLLKHITSVPWEYDDIVP--DYEVGKTICLLFLSLRYHNLNPDYIHNR 107
+ + N Q+ N L EYD + D+ VG + +L+ +YH+ N Y+
Sbjct: 13 YVIKANLIQKKNYKLLDFIRKRVEYDPGIKQGDFIVGNMTKIFYLTYKYHSTNIKYLEEC 72
Query: 108 LKELGKKYD--LRVLLVQVDLKDPHAS---LKNLTRICLLTDITLMLAWNPEEAAKVVEN 162
+ L ++ + L ++L +D K + ++++ TL++A + +AA +E
Sbjct: 73 IVPLIEQSNEYLNIVLFVIDCKINEINEEIIQDVNIKLFKKKCTLIIAQSYSDAAHYIEE 132
Query: 163 YKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRL 222
+ + EN + + ++I +IINALS IK +N +A L+ F TL+ + V + L
Sbjct: 133 FSVVENSQ-NEVSDQINE--RTQIINALSMIKGINSQNAYDLLMKFNTLKRLGVVDKDEL 189
Query: 223 AECPGFGITKAKKLYKALHEPFL 245
+ G K + +++ H P +
Sbjct: 190 KKSKNIGPKKVESIWRVFHSPIV 212
>UniRef50_Q4D929 Cluster: DNA repair protein, putative; n=2;
Trypanosoma cruzi|Rep: DNA repair protein, putative -
Trypanosoma cruzi
Length = 269
Score = 52.0 bits (119), Expect = 2e-05
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 119 VLLVQVDLKDPHASLKNLTRICLLTDI--TLMLAWNPEEAAKVVENYKIYENKPPD-RIM 175
VLL+ VD DP + + ++ +ML W EE A +E ++ D R+
Sbjct: 85 VLLLLVDSTDPRPDVLAWLNLHCSVELRCAVMLCWTEEECASYLEGLAVFSVGSVDYRLS 144
Query: 176 EKIENDPHQKIINALSSIKPV-NKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAK 234
K E+ P +I A + + + D + +G++ ++ S L PGFG +A
Sbjct: 145 NKKESAPIPVLIEAFTQTPQLMTRNDVVRAAHRYGSVAELLTASLEDLTSLPGFGPKRAG 204
Query: 235 KLYKALHEPF 244
+L+ LH F
Sbjct: 205 RLHNVLHAGF 214
>UniRef50_A5UMG4 Cluster: ERCC4-like helicase; n=2;
Methanobacteriaceae|Rep: ERCC4-like helicase -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 772
Score = 49.6 bits (113), Expect = 9e-05
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 128 DPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYEN---KPPDRIM--EKIENDP 182
+P+A ++ I L I+++ N ++ A +++ I E K P +I +K N
Sbjct: 639 NPNAIRGSIASIALDFGISIIPTRNAQDTAAMIKRIAIREQSGEKTPIQIRTDKKPVNLW 698
Query: 183 HQK--IINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKAL 240
Q+ II +L +I PVN A L++ FGT+ NII SES+L E G G A + K +
Sbjct: 699 EQQLFIIESLPNIGPVN---AKNLLEHFGTVANIINASESQLQEVEGIGKKTAANIRKVV 755
Query: 241 HEPFLK-KGQTKDKK 254
+L + + K+KK
Sbjct: 756 DSKYLYFQNEIKEKK 770
>UniRef50_Q57V05 Cluster: DNA repair protein, putative; n=1;
Trypanosoma brucei|Rep: DNA repair protein, putative -
Trypanosoma brucei
Length = 266
Score = 48.0 bits (109), Expect = 3e-04
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 147 LMLAWNPEEAAKVVENYKIYENKPPDRIME-KIENDPHQKIINALSSIKPV-NKTDAMTL 204
+ML W EE A +E D + + ++ P Q +I+AL+ + + D +
Sbjct: 115 VMLFWTDEECAAYLEGLSDSNVATADYCVGVRRDSTPMQLLIDALTQTPQLMTRNDVVRA 174
Query: 205 IKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPF 244
+ +FG++ ++ + +L E PGF KA +L+ L+ PF
Sbjct: 175 VNSFGSVAGLLTATAEQLTELPGFAQKKAGRLHAVLNAPF 214
>UniRef50_Q8TUS6 Cluster: ERCC4-like helicase-nuclease; n=1;
Methanopyrus kandleri|Rep: ERCC4-like helicase-nuclease
- Methanopyrus kandleri
Length = 741
Score = 43.2 bits (97), Expect = 0.007
Identities = 43/203 (21%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 47 SKTHCVLVNKNQRGNPLLKHITSVP--WEYDDI-VPDYEVGKTICLLFLSLR--YHNLNP 101
S+ ++V+ + +++H+ P E D + + DY VG+ + + S +L
Sbjct: 539 SRAPVIVVDSRELNTKVVEHLRRKPVVLERDTLELADYVVGEGVGVERKSESDFARSLLD 598
Query: 102 DYIHNRLKELGKKYDLRVLLVQVDLK---DPHASLKNLTRICLLTDITLMLAWNPEEAAK 158
+ ++ +E+ +++D V++V+ + + +P A L + + I+++ + PEE A+
Sbjct: 599 GRLMDQAREMTREFDRAVIIVEGNPRREIEPEAVDGALATLAVDFGISVLQSAGPEETAE 658
Query: 159 VVENY-KIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKV 217
++ K +E + R ++ + + + LS I V A L+ FG++ +++
Sbjct: 659 LLYRMAKRFEERQRPRPRKRRSTEDLR--VEMLSCIPGVGPELARRLLDEFGSIGDVVNA 716
Query: 218 SESRLAECPGFGITKAKKLYKAL 240
S S L G G KA+++ + L
Sbjct: 717 SPSELKRVKGIGERKAREIRRFL 739
>UniRef50_A6UTA1 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Methanococcus aeolicus Nankai-3|Rep: DEAD/DEAH box
helicase domain protein - Methanococcus aeolicus
Nankai-3
Length = 808
Score = 42.3 bits (95), Expect = 0.013
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 8/150 (5%)
Query: 104 IHNRLKELGKKYDLRVLLVQV-DLKDPHASLKNLTRICLLTD--ITLMLAWNPEEAA--- 157
+ +LK+L KKY+ +L+V+ D + N T + ++ D I ++ + EE A
Sbjct: 660 LFKQLKDL-KKYERPILIVEGNDYFRLSEKIINGTMVSIMLDFNIPVIFTKDMEETANIL 718
Query: 158 -KVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIK 216
K+ E ++ + + K ++ + S + A L+ FGT+ENI+K
Sbjct: 719 IKMAEREQLRDKRTISIRTGKKPMSLKERQRFIVESFPDIGALMAENLLIKFGTIENIVK 778
Query: 217 VSESRLAECPGFGITKAKKLYKALHEPFLK 246
S L E G G AKK+ L E + K
Sbjct: 779 ASVEELREVEGIGEITAKKIKSVLTEKYEK 808
>UniRef50_A2BL31 Cluster: Predicted ERCC4-type nuclease; n=1;
Hyperthermus butylicus DSM 5456|Rep: Predicted
ERCC4-type nuclease - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 223
Score = 41.9 bits (94), Expect = 0.017
Identities = 32/152 (21%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 104 IHNRLKELGKKYDLRVLLVQVDLKD-----PHASLKNLTRICLLTDITLMLAWN--PEEA 156
++++ + L + Y++ ++LV+ D + A L + + D ++ + W+ PEE+
Sbjct: 66 LYDQARRLSEHYEVPIILVEGDPAELERVTSRALQVKLALLAISLDYSVRIVWSSGPEES 125
Query: 157 AKVVENYKIYENKPPDRIMEKIENDPHQKI----INALSSIKPVNKTDAMTLIKTFGTLE 212
AK++ + E R + +K+ + + S+ + A L++ FG++E
Sbjct: 126 AKIIYSVACREQALKQRPVVIHRKPRLEKLWMQQLYVVQSLPGIGPRLAERLLEKFGSIE 185
Query: 213 NIIKVSESRLAECPGFGITKAKKLYKALHEPF 244
I + S L + G+ +A K+Y+ +H P+
Sbjct: 186 AICRASIVELEKVLGY--ERAVKVYRVIHAPY 215
>UniRef50_A0RTK1 Cluster: Helicase-associated endonuclease for
fork-structured DNA; n=2; Thermoprotei|Rep:
Helicase-associated endonuclease for fork-structured DNA
- Cenarchaeum symbiosum
Length = 231
Score = 41.5 bits (93), Expect = 0.023
Identities = 28/117 (23%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 126 LKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKPPDRIMEKIE--NDPH 183
+++P ++RI L I ++ + AK++ + + +++ ++KI+ ND
Sbjct: 98 IENPLTFYGAVSRIALDFKIPIIPTPSAAHTAKLLVSMCLKKDRAAGPFLKKIKKSNDVQ 157
Query: 184 QKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKAL 240
++ +++LSS+ V + A +++ FGT S + L++ G G ++AKK+ K L
Sbjct: 158 KQQLSSLSSLPGVGEKLAGRMLEKFGTPLRTFNASSAELSKVAGLGPSRAKKIRKML 214
>UniRef50_Q5JJ98 Cluster: Helicase-associated endonuclease for
fork-structured DNA; n=2; cellular organisms|Rep:
Helicase-associated endonuclease for fork-structured DNA
- Pyrococcus kodakaraensis (Thermococcus kodakaraensis)
Length = 804
Score = 41.1 bits (92), Expect = 0.030
Identities = 48/226 (21%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 36 TSDEATIKP---RSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDI---VPDYEVGKTICL 89
T++E IKP R K V V+ + + + KH+ + E + V DY V + + +
Sbjct: 578 TTEELPIKPIFVRKPKGIVVYVDSRELRSGVPKHLRELGAEVEVRTLDVADYVVSEEVGI 637
Query: 90 LFLSLR--YHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKD-----PHASLKNLTRICLL 142
S ++ + ++++ L + Y+ V++++ +L P+A + + L
Sbjct: 638 ERKSANDFIQSIIDGRLFDQVERLKRAYEKPVIIIEGELYGIRNVHPNAIRGAIAAVTLD 697
Query: 143 TDITLMLAWNPEEAAKVVENYKIYENKPPDRIME-KIENDP-------HQKIINALSSIK 194
+ ++ + PEE A+ + Y + + + +R E ++ ++ Q++I + +
Sbjct: 698 WGVPILFSSGPEETAQFI--YLMAKREQEERKKEVRLRSEKKALTLAERQRLI--VEGLP 753
Query: 195 PVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKAL 240
V+ T A L+K FG +E + +E L E G G KA+++ + +
Sbjct: 754 NVSATLAKRLLKHFGNVERVFTATEEELKEVEGIGPKKAREIRRVI 799
>UniRef50_Q22RX3 Cluster: Mating-type switching protein swi10,
putative; n=1; Tetrahymena thermophila SB210|Rep:
Mating-type switching protein swi10, putative -
Tetrahymena thermophila SB210
Length = 149
Score = 39.9 bits (89), Expect = 0.070
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 58 QRGNPLLKHITSVPWEYD---DIVPDYEVGKT-ICLLFLSLRYHNLNP-DYIHNRLKELG 112
Q N L +I+ WE D D+ + + +FLSL+YH N YI +L+
Sbjct: 15 QTQNKLFDNISKERWEITKNKDQEADFVIEDSPYSFIFLSLKYHTQNNIKYIGQKLEAFK 74
Query: 113 K-----KYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYE 167
K KY R+LL+ D+ D + L ++C ++TL+ + +E A + +
Sbjct: 75 KNEDYNKYKKRILLLLCDVNDDKDQMFYLHKMCEDYNLTLLCGFTFQEIANYILTFLSVS 134
Query: 168 N 168
N
Sbjct: 135 N 135
>UniRef50_Q9HMW5 Cluster: ATP-dependent RNA helicase homolog eIF-4A;
n=1; Halobacterium salinarum|Rep: ATP-dependent RNA
helicase homolog eIF-4A - Halobacterium salinarium
(Halobacterium halobium)
Length = 784
Score = 39.9 bits (89), Expect = 0.070
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 104 IHNRLKELGKKYDLRVLLVQVD-----LKDPHASLKNLTRICLLTD--ITLMLAWNPEEA 156
I + KEL ++Y VL+V+ D ++ H + L D +++M +
Sbjct: 630 IFEQAKELARQYTRPVLVVEGDGDLYAERNVHPNAVRSAMASLAVDWGLSVMHTNGEGDT 689
Query: 157 AKVVENYKIYENKPPDRIM----EKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLE 212
+++E E DR + EK ++ +SSI V A +L+ TFG++E
Sbjct: 690 TEMIETIAEREQTTNDRAVSAHGEKAAKTQGEQQEYVVSSITDVGPVTARSLLDTFGSVE 749
Query: 213 NIIKVSESRLAECPGFGITKAKKL 236
++ SE L G G A+++
Sbjct: 750 AVMTASEDELTAADGVGAVTAERI 773
>UniRef50_Q8R653 Cluster: Zinc protease; n=3; Fusobacterium
nucleatum|Rep: Zinc protease - Fusobacterium nucleatum
subsp. nucleatum
Length = 408
Score = 39.5 bits (88), Expect = 0.092
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 139 ICLLTDITLMLAWNPEEAAK----VVENYKIYENKPPDRIMEK-----IENDPHQKIINA 189
I +LTD+ L ++ E K ++E K+YE+ P + + EK + I
Sbjct: 101 IDVLTDMLLNSNFDEESIEKERNVIIEEIKMYEDIPEEIVHEKNVEYALRGVHSNSISGT 160
Query: 190 LSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPFLKKGQ 249
++S+K +N+ + ++ + EN++ V+ + E K LYK L++ K
Sbjct: 161 VASLKKINRKAILNYLEKYYVAENLVIVASGNIDE---------KYLYKELNKKM--KNF 209
Query: 250 TKDKKDEFPDEDLTLEELEKIVNE 273
K KK+E D +++ +K+V +
Sbjct: 210 RKTKKEEVLDLSYEIKKGKKVVKK 233
>UniRef50_Q9RSQ5 Cluster: DNA ligase; n=2; Deinococcus|Rep: DNA
ligase - Deinococcus radiodurans
Length = 700
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 175 MEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAK 234
+E + P ++INAL + V + +A L + FGTLE ++ + ++ PG G A+
Sbjct: 509 LEASKTKPLWRLINALG-MSHVGQRNAQALARAFGTLEGLLAATPEQIEAVPGLGGIIAQ 567
Query: 235 KLYKALHEPFLK 246
+ +L +P ++
Sbjct: 568 SVTASLADPAMR 579
>UniRef50_Q0F271 Cluster: Excinuclease ABC subunit C; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Excinuclease ABC
subunit C - Mariprofundus ferrooxydans PV-1
Length = 611
Score = 38.7 bits (86), Expect = 0.16
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 188 NALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHE 242
+ L +++ + ++L+K FG +E + K +LA+ PG A+K++ +LH+
Sbjct: 557 SVLDTVEGIGPAKRISLLKHFGGIEGVKKAGRKQLAQAPGISDKLAEKIFLSLHK 611
>UniRef50_A4F130 Cluster: Putative integrase for prophage CP-933U;
n=1; Roseobacter sp. SK209-2-6|Rep: Putative integrase
for prophage CP-933U - Roseobacter sp. SK209-2-6
Length = 313
Score = 38.7 bits (86), Expect = 0.16
Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 17/145 (11%)
Query: 45 RSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRYHNLNPDY- 103
R+ K + + + GNP+ +T E D P + L +SL H L P+
Sbjct: 164 RTPKGRRLFFKRTKTGNPVAIPVTPALAELIDNTPKGQE-----YLVVSLEGHRLQPERA 218
Query: 104 ------IHNRLKELGK----KYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNP 153
+ NR+ L K KY +R L D++ A+ + L C L +I + + W
Sbjct: 219 SGIVRDLRNRVNALAKDDPAKYSIRDELHLYDMRGT-AATELLRAGCSLEEIAITMGWGL 277
Query: 154 EEAAKVVENYKIYENKPPDRIMEKI 178
A+ ++E Y + D ++ K+
Sbjct: 278 RHASNIIEKYVALVPEKSDEVLRKL 302
>UniRef50_Q89AD1 Cluster: Probable 5'-3' exonuclease; n=1; Buchnera
aphidicola (Baizongia pistaciae)|Rep: Probable 5'-3'
exonuclease - Buchnera aphidicola subsp. Baizongia
pistaciae
Length = 302
Score = 38.7 bits (86), Expect = 0.16
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 20/187 (10%)
Query: 56 KNQRGNPLLKHITSVPWEY-DDIVPDYEVGKTICLLFLSLRYHNLNPDYIHNRLKELGKK 114
+N+ P K+ +P + + I+P + + K I + +S+ + + D I +L KK
Sbjct: 71 RNELFIPYKKNRPKMPNDLKEQILPIHHIIKHIGIPIISIPHVEAD-DIIGTLATKLYKK 129
Query: 115 YDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKPPDRI 174
+L+ + KD A L N+ L+ ++L + +KV + Y I PD +
Sbjct: 130 KYF--ILISTNDKDL-AQLVNIHIHVLIGTSNIVL-----DESKVKKKYGIIPKLIPDLL 181
Query: 175 MEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAK 234
+N + + + V K A+ L+KTFG+LENI + + + P I KAK
Sbjct: 182 GLMGDNSDN------IPGVPTVGKKTALILLKTFGSLENIY----NNIEKIPKCLIKKAK 231
Query: 235 KLYKALH 241
+Y LH
Sbjct: 232 TIYNNLH 238
>UniRef50_Q8TZH8 Cluster: ATP-dependent RNA helicase, putative; n=5;
Pyrococcus|Rep: ATP-dependent RNA helicase, putative -
Pyrococcus furiosus
Length = 764
Score = 37.5 bits (83), Expect = 0.37
Identities = 32/154 (20%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 104 IHNRLKELGKKYDLRVLLVQVDLKD-----PHASLKNLTRICLLTDITLMLAWNPEEAAK 158
+ +++K L + Y +++V+ L P+A + + + + ++ + PEE A+
Sbjct: 610 LFDQVKRLKEAYSRPIMIVEGSLYGIRNVHPNAIRGAIAAVTVDFGVPIIFSSTPEETAQ 669
Query: 159 ---VVENYKIYENKPPDRIMEK---IENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLE 212
++ + E + P RI + + Q++I + + V+ T A L+K FG++E
Sbjct: 670 YIFLIAKREQEEREKPVRIRSEKKALTLAERQRLI--VEGLPHVSATLARRLLKHFGSVE 727
Query: 213 NIIKVSESRLAECPGFGITKAKKLYKALHEPFLK 246
+ S + L + G G AK++ + + P+++
Sbjct: 728 RVFTASVAELMKVEGIGEKIAKEIRRVITAPYIE 761
>UniRef50_Q4JB33 Cluster: XPF/RAD1 repair endonuclease; n=4;
Sulfolobaceae|Rep: XPF/RAD1 repair endonuclease -
Sulfolobus acidocaldarius
Length = 236
Score = 37.5 bits (83), Expect = 0.37
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 144 DITLMLAWNPEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIIN-------ALSSIKPV 196
D+ ++ + N +++A+V+ YK+ E I K N + S+ V
Sbjct: 108 DLRVLFSLNKKDSAEVL--YKLAEKISAKSNFRSINLHDKPKFENLKDIQLYVVESLPNV 165
Query: 197 NKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPFLKKGQTK 251
+ A L++ F T+ENI K S S L + G +A+++YK LH + TK
Sbjct: 166 GEKLAKKLLEKFNTIENICKASISDLEKALG-SRKRAEEIYKVLHTAYSSDNGTK 219
>UniRef50_Q7RL00 Cluster: Putative uncharacterized protein PY02748;
n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY02748 - Plasmodium yoelii yoelii
Length = 871
Score = 37.1 bits (82), Expect = 0.49
Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 25/235 (10%)
Query: 55 NKNQRGNPLLKHITSVPWEYDDIVPDYE--VGKTICLLFLSLRYHNLNPDYIHNRLKELG 112
NKN R N S W++ ++ D + + ++I L F++ + N ++ +K
Sbjct: 235 NKNTRQN-------SKAWKFQELFDDVKNKINESINLNFINKKESG-NVSETYSNIKNKQ 286
Query: 113 KKYDLRVLLVQVDLKDPHASLKNLTR--ICLLTDITLMLAWNPEEAA----KVVENYKIY 166
K+ + ++ LK + LK L I +DI + +E K+ +NY+++
Sbjct: 287 KELENNFKRIETHLKKMESKLKTLQNDIISKTSDIDYFKNDSKKEVENIKKKLQDNYQLF 346
Query: 167 ENKPPD--RIMEKIENDPHQK---IINALSSIKPVNKTDAMTLIKT-FGTLENIIKVSES 220
+NK D +I++ I+ D +K I N + + N+ I + +N S
Sbjct: 347 QNKFVDYLKIIDDIKIDVSEKKKTIFNEIENKVHANQISIEEGISSKIEHQKNYFFEKFS 406
Query: 221 RLA-ECPGFGITKAKKLYKAL-HEPFLKKGQTKDKKDEFPDEDLTLEELEKIVNE 273
+L + I+ A K Y + FLK G +KK+ + D +E+++KI +E
Sbjct: 407 KLEKQMEDIEISIANKTYSNFENNEFLKNGGD-EKKNVYIYADKQIEDIKKITDE 460
>UniRef50_O28814 Cluster: ATP-dependent RNA helicase, putative; n=2;
Euryarchaeota|Rep: ATP-dependent RNA helicase, putative
- Archaeoglobus fulgidus
Length = 741
Score = 37.1 bits (82), Expect = 0.49
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 181 DPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKAL 240
D + I++A+S+ V A L+ F T+ENI E LA+ P G AK++ + +
Sbjct: 670 DEQEYIVSAISN---VGNVIARNLLDYFQTIENIATADEEELAKVPKVGKKIAKRIRRVM 726
Query: 241 HEPFLKKG 248
P+ + G
Sbjct: 727 TTPYSEAG 734
>UniRef50_A5YS51 Cluster: Putative uncharacterized protein; n=1;
uncultured haloarchaeon|Rep: Putative uncharacterized
protein - uncultured haloarchaeon
Length = 651
Score = 37.1 bits (82), Expect = 0.49
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 152 NPEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKP--VNKTDAMTLIKTFG 209
+PE+ +K N I E + PD+++EK +I NA+ +++ +++T+ + + KT
Sbjct: 144 DPEDISKKYYNKLIVEGEDPDKVVEKETPLVAHRIKNAIETVRQMILSETNELDIKKTLD 203
Query: 210 TLENIIKV--SESRLAECPGFGITKAKKLYKALHE 242
L+ I+ +E RL I +A +++K ++E
Sbjct: 204 FLDQFIQTLSNEFRLNIHYLSNIDEASRMFKIVNE 238
>UniRef50_Q630W7 Cluster: Putative uncharacterized protein; n=1;
Bacillus cereus E33L|Rep: Putative uncharacterized
protein - Bacillus cereus (strain ZK / E33L)
Length = 625
Score = 36.7 bits (81), Expect = 0.65
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 164 KIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLA 223
++YE K + + + E H K I AL +K D +K EN IK+ E +
Sbjct: 303 RVYERKNQESMAQLEELREHLKKIEALICVKNEEIDD---YLKLMVEKENKIKLLEEKNI 359
Query: 224 ECPGFGITKAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVNENQDIS 278
E G K K + + E L+K K++K +L +E ++I+N Q +S
Sbjct: 360 EIQGVVKDKEKYILNLIRE--LEKSNEKNEKLIMQKINLEMEVQQEIINNLQILS 412
>UniRef50_A5K2U3 Cluster: DNA repair endonuclease, putative; n=1;
Plasmodium vivax|Rep: DNA repair endonuclease, putative -
Plasmodium vivax
Length = 1630
Score = 36.7 bits (81), Expect = 0.65
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 74 YDDIVPDYEVGKTICLLFLSL--RYHNLNPDYIHNRLKELGKKYDLRVLLVQVD------ 125
Y +V DY + K IC+ ++ +LN + +HN++ ++ K Y + VLL++ +
Sbjct: 1319 YSLLVGDYILTKDICVERKTIVDLIQSLNNNRLHNQINQMSKYYSIYVLLIEFNTKHLFY 1378
Query: 126 ---LKDPHASLKNLTRICLLTDITLMLAWNPEE--AAKVVENYKIYENKPPD----RIME 176
L D ++ L +CL L + W+P K+ + KI +P I
Sbjct: 1379 FSSLSDKNSVYTKLIILCLQFS-RLKILWSPFSLFTVKLFWSLKINAEQPDIFKSLHIDM 1437
Query: 177 KIENDPHQKI 186
+E D HQ+I
Sbjct: 1438 TLERDAHQRI 1447
>UniRef50_O27466 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 738
Score = 36.7 bits (81), Expect = 0.65
Identities = 29/151 (19%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 104 IHNRLKELGKKYDLRVLLVQVD-----LKDPHASLKNLTRICLLTDITLMLAWNPEEAAK 158
++ + +E+ K + V++++ D +P A L + + I ++ + E+ A
Sbjct: 577 LYKQAREMVKNFKRPVMIIEGDDLYSGFINPDAVRGALAAVAVDFGIPVIPTRSAEDTAA 636
Query: 159 VVENYKIYENKP--PDRIMEKIENDP---HQKIINALSSIKPVNKTDAMTLIKTFGTLEN 213
++ I E + PD + + + P +K + + S+ + A L++ FG++E
Sbjct: 637 MIRRIAIREQREGRPD-MRVRTDKKPLTLREKQLFIVESLPNIGSKYAERLLEAFGSVEG 695
Query: 214 IIKVSESRLAECPGFGITKAKKLYKALHEPF 244
++ SE L G G +A ++ + + F
Sbjct: 696 VMNASEKELRSVEGIGAKRASEIRRVIEAEF 726
>UniRef50_Q83CD5 Cluster: UvrABC system protein C; n=25;
Gammaproteobacteria|Rep: UvrABC system protein C -
Coxiella burnetii
Length = 609
Score = 36.7 bits (81), Expect = 0.65
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 184 QKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHE 242
+++ + L I+ + L+K FG L+ + + S +A PG T AK +Y A H+
Sbjct: 548 RRVESTLQEIEGIGPKRRQKLLKYFGGLQELQRASIEEIARVPGVSETLAKAIYDACHQ 606
>UniRef50_Q1AU07 Cluster: Putative uncharacterized protein; n=1;
Rubrobacter xylanophilus DSM 9941|Rep: Putative
uncharacterized protein - Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129)
Length = 361
Score = 36.3 bits (80), Expect = 0.86
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 190 LSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKAL 240
L+ + + + A LI+ FG+LE +++ SE+ L E G G +A+ +++ L
Sbjct: 298 LAQVPRLPRKVAENLIREFGSLEGLLEASEAELDEVEGVGQARARAIHRGL 348
>UniRef50_A7HJ71 Cluster: Putative uncharacterized protein; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: Putative
uncharacterized protein - Fervidobacterium nodosum
Rt17-B1
Length = 354
Score = 36.3 bits (80), Expect = 0.86
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 166 YENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAEC 225
Y+ ++ E N +++ I P+N + L+K+F +L NI+K + L +
Sbjct: 275 YDLNNQQQVSETFVNPRGYRVLRREIHI-PINISQ--NLVKSFHSLSNIVKTDANNLQKV 331
Query: 226 PGFGITKAKKLYKALHEPFLKKGQ 249
G G+ +AK + K L + +K+G+
Sbjct: 332 DGVGMKRAKAIIKTLRQ--MKRGR 353
>UniRef50_A6EGW7 Cluster: Putative DNA processing Smf-like protein;
n=1; Pedobacter sp. BAL39|Rep: Putative DNA processing
Smf-like protein - Pedobacter sp. BAL39
Length = 365
Score = 36.3 bits (80), Expect = 0.86
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 189 ALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKL 236
AL+ IK V A L+ FG+ E I + S L E PG G+ A+++
Sbjct: 8 ALTLIKNVGHVTAKALLSHFGSPERIFEASREELMEVPGVGMLTAREI 55
>UniRef50_Q8NQ55 Cluster: UvrABC system protein C; n=3;
Actinomycetales|Rep: UvrABC system protein C -
Corynebacterium glutamicum (Brevibacterium flavum)
Length = 696
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 187 INALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALH 241
++ L SIK + ++ L+K FG++ + + S +++ GFG A+ +Y+ LH
Sbjct: 639 VSELDSIKGLGQSRRTELVKHFGSVAKLKEASVEDISQVKGFGPKLAEAVYEGLH 693
>UniRef50_O25336 Cluster: DNA ligase; n=7; Campylobacterales|Rep:
DNA ligase - Helicobacter pylori (Campylobacter pylori)
Length = 656
Score = 35.9 bits (79), Expect = 1.1
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 177 KIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKL 236
K +N P ++INAL I+ + K + TL K +G N+++ SE+ E GFG+ A+ L
Sbjct: 491 KSKNPPLWRLINALG-IEHIGKGASKTLAK-YGL--NVLEKSEAEFLEMEGFGVEMARSL 546
Query: 237 --YKALHEPFLK 246
+ A ++ F++
Sbjct: 547 VNFYASNQEFIR 558
>UniRef50_UPI00004990DD Cluster: hypothetical protein 7.t00064; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 7.t00064 - Entamoeba histolytica HM-1:IMSS
Length = 298
Score = 35.5 bits (78), Expect = 1.5
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 8/117 (6%)
Query: 165 IYENKPPDRIMEKIENDPHQKIINALSSI------KPVNKTDAMTLIKTFGTLENIIKVS 218
IY+ K D I +K E++ Q I+ A+ + K + K D M I++ L+ ++
Sbjct: 8 IYKMKVVDLINDKKEDEMIQLIVQAMKKLHDPLEEKYITKRDEM--IQSLKQLDGLLVSE 65
Query: 219 ESRLAECPGFGITKAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVNENQ 275
E P I + + K L+ +++ +T+ K+E ++ L +++K VNE Q
Sbjct: 66 EIAQKRVPLMTIKQVEDKEKELNSFQIEEKKTEKIKEEIKTKEEQLLKMKKEVNEKQ 122
>UniRef50_A5EW70 Cluster: Excinuclease ABC, C subunit; n=1;
Dichelobacter nodosus VCS1703A|Rep: Excinuclease ABC, C
subunit - Dichelobacter nodosus (strain VCS1703A)
Length = 607
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 187 INALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHE 242
++ L I + + L++ FG L +++ S + PG + A ++Y ALH+
Sbjct: 550 VSLLEEIPNIGRKRRQALLQHFGNLAGLMQASPEDITRVPGISVKLAAQIYAALHQ 605
>UniRef50_A3JK29 Cluster: ERCC4-like helicase-nuclease; n=1;
Marinobacter sp. ELB17|Rep: ERCC4-like helicase-nuclease
- Marinobacter sp. ELB17
Length = 380
Score = 35.5 bits (78), Expect = 1.5
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 187 INALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKAL 240
I+ L SI V+ A TL++ FG+++ I S+ LA G G+ +A+++ L
Sbjct: 325 IHVLESIPGVSTHIAETLLERFGSIKAIAAASQGELARVKGVGLKRAREISDVL 378
>UniRef50_A0EAJ1 Cluster: Chromosome undetermined scaffold_86, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_86,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 268
Score = 35.5 bits (78), Expect = 1.5
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 158 KVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKP-VNKTDAMTLIKTFGTLENIIK 216
K + N K + ++ K++N +Q+I+ + +I P + + T+I L +
Sbjct: 47 KQMSNIKFVYQRKVHKLPAKVQN--YQEIVETIKTIYPQLKEVHLFTIINPSRDLNLFLD 104
Query: 217 VS-ESRLAECPGFGITKAKKLYKALHEPFLKKGQTKDKKDE 256
E C FG+T KKLYK + P +K +++KDE
Sbjct: 105 HPIEIEEINCD-FGLTFLKKLYKQMRWPTIKLLLLENEKDE 144
>UniRef50_A0CU34 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 903
Score = 35.5 bits (78), Expect = 1.5
Identities = 28/134 (20%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Query: 75 DDIVPDY-EVGKTICLLFLSLRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHAS- 132
++IV Y +V + CL+ LS Y N + + + + L + D+ + + + H
Sbjct: 73 ENIVKSYLQVLQQYCLVILSCAYANNSRTRLRSFIATLRSQQDINEIYKECFIAQHHQQE 132
Query: 133 LKNLTRICL----LTDITLMLAWNPEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIIN 188
+K+L R+ L + + +L+ + + N++ K I E I++ PHQ+++
Sbjct: 133 VKDLIRLILKQFYIKEFSLLQFKQDHQCHILSNNFESTIIKEAQEIQEFIDSQPHQQLLE 192
Query: 189 ALSSIKPVNKTDAM 202
+ + KT+ +
Sbjct: 193 TPADYLSLLKTEKL 206
>UniRef50_Q9YC15 Cluster: Repair endonuclease XPF; n=1; Aeropyrum
pernix|Rep: Repair endonuclease XPF - Aeropyrum pernix
Length = 248
Score = 35.5 bits (78), Expect = 1.5
Identities = 24/104 (23%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 145 ITLMLAWNPEEAAKVVENY-KIYENKPPDRIMEKIE---NDPHQKIINALSSIKPVNKTD 200
I LM +P+ A V+E+ ++ + RI+ + +D + + L S + +
Sbjct: 119 IRLMNTMDPKGTALVIESLARLSTREGGQRIVIHKKPRLSDVREWQLYILQSFPGIGRRT 178
Query: 201 AMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPF 244
A +++ FG+LE S++ +++ G G +A+++ K L P+
Sbjct: 179 AERILERFGSLERFFTASKAEISKVEGIGEKRAEEIKKILMTPY 222
>UniRef50_UPI0001509CD5 Cluster: Zinc finger, C2H2 type family
protein; n=1; Tetrahymena thermophila SB210|Rep: Zinc
finger, C2H2 type family protein - Tetrahymena
thermophila SB210
Length = 182
Score = 35.1 bits (77), Expect = 2.0
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 42 IKPRSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVPDYEVGKTICLLFLSLRY---HN 98
IK + + VNK RG P + + D VP+ + I +L L +N
Sbjct: 34 IKQKHNNDKSFQVNKGDRGRPPKQSPVFYQIK-DGFVPEIQKLHQIAILILKSNQKFINN 92
Query: 99 LNPDYIHNRLKELGKKYDLRVLLVQVD 125
+N D I N++ + ++ D +V L+Q+D
Sbjct: 93 INLDNIKNQINSMNQEIDTQVSLIQMD 119
>UniRef50_P46883 Cluster: Copper amine oxidase precursor; n=13;
Gammaproteobacteria|Rep: Copper amine oxidase precursor
- Escherichia coli (strain K12)
Length = 757
Score = 35.1 bits (77), Expect = 2.0
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 188 NALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKL 236
N L S +P+ M L+ F +++NII SE A GIT AKK+
Sbjct: 202 NKLLSWQPIKDAHGMVLLDDFASVQNIINNSEEFAAAVKKRGITDAKKV 250
>UniRef50_Q6CKF9 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 769
Score = 34.7 bits (76), Expect = 2.6
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 153 PEEAAKVVEN--YKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGT 210
P A +V E+ Y+ + K +I K E+D +K++N S+ + D + IKT
Sbjct: 38 PVNALEVSESLGYQTFRRKMR-KIWTKEEDDLLRKLVN--ESLVNLGYPDGIKSIKTIQQ 94
Query: 211 LENIIK-VSESRLA---ECPGFGITKAKKLYKALHEPFLKKGQTKDKKDE 256
N++K + +LA E T KK + + +P LKKG+ ++DE
Sbjct: 95 SSNVVKKIPWDQLAKQFELDNKKATDVKKRWTSSLDPVLKKGKWTPEEDE 144
>UniRef50_Q4FQ48 Cluster: UvrABC system protein C; n=7;
Pseudomonadales|Rep: UvrABC system protein C -
Psychrobacter arcticum
Length = 614
Score = 34.7 bits (76), Expect = 2.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 204 LIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHE 242
L+ FG L+ ++ S+ LA G G AK +YK LHE
Sbjct: 576 LLNHFGGLQQLLGASQQELAGVQGIGPILAKTVYKVLHE 614
>UniRef50_Q86XP1 Cluster: Diacylglycerol kinase eta; n=61;
Euteleostomi|Rep: Diacylglycerol kinase eta - Homo
sapiens (Human)
Length = 1220
Score = 34.7 bits (76), Expect = 2.6
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 112 GKKYDLRVLLVQVDLKDPHASLKNLTRICLLT-DITL----MLAWNPEEAAKVVENYK-I 165
G YD L Q+ K AS K L R ++T ++ L L P EA++ E Y I
Sbjct: 430 GGSYDDDTQLPQILEKLERASTKMLDRWSIMTYELKLPPKASLLPGPPEASE--EFYMTI 487
Query: 166 YENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFG-TLENIIKVSESRLAE 224
YE+ + + + +D H +I++ ++ K + KT+ TLEN + V+++ ++
Sbjct: 488 YEDSVATHLTKILNSDEHAVVISSAKTLCETVKDFVAKVEKTYDKTLENAV-VADAVASK 546
Query: 225 CPGFGITKAKKLYKALH 241
C K ++L +ALH
Sbjct: 547 CSVLN-EKLEQLLQALH 562
>UniRef50_Q7T5J1 Cluster: Desmoplakin; n=1; Cryptophlebia leucotreta
granulovirus|Rep: Desmoplakin - Cryptophlebia leucotreta
granulosis virus (ClGV) (Cryptophlebialeucotreta
granulovirus)
Length = 720
Score = 34.3 bits (75), Expect = 3.5
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 159 VVENYKIY-ENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKV 217
+ + YK Y EN D +++I ++ +K I ++S K + + ++ + L+NI K
Sbjct: 165 IKKRYKKYIENLKKD--LKEISDN--EKDIIDINSFKTIFQLKRSSVKECVSLLKNIKKF 220
Query: 218 SESRLAECPGFGITKAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVNENQDI 277
E+ C + K LY A L Q K + P + + E +K+VNEN+DI
Sbjct: 221 VENNYGPCDD---SVEKYLY-AFRTIGLNILQLKQDSENPPQDQKLINENQKLVNENEDI 276
>UniRef50_A2SND2 Cluster: Helicase-associated endonuclease for
fork-structured DNA; n=1; Methylibium petroleiphilum
PM1|Rep: Helicase-associated endonuclease for
fork-structured DNA - Methylibium petroleiphilum (strain
PM1)
Length = 216
Score = 34.3 bits (75), Expect = 3.5
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 201 AMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALH 241
A +I FG++ + +E LA PG G AKK+++ LH
Sbjct: 173 AQAIIAHFGSVHAALVATEQELAGVPGLGAKTAKKVHEVLH 213
>UniRef50_Q8I3P4 Cluster: Putative uncharacterized protein PFE1095w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE1095w - Plasmodium falciparum
(isolate 3D7)
Length = 1777
Score = 34.3 bits (75), Expect = 3.5
Identities = 25/104 (24%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 172 DRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGIT 231
D + +K E+D + K + +S+ +++ + ++ + ++I+K E +L + I
Sbjct: 811 DLLQKKREDDIYYKQSH-ISNNNKIHEEENLSFFEKLYKSQSIVKYEEQKLEDSSKKIIE 869
Query: 232 KAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVNENQ 275
++ KL K +K+ ++KKD +++L +E E+I+NEN+
Sbjct: 870 ESLKLSK------IKEINEQNKKDLEIEKELIKKENEEIINENE 907
>UniRef50_Q5CXQ4 Cluster: Thioredoxin/PDI, cyanobacterial type,
signal peptide plus 4 transmembrane domains; n=2;
Cryptosporidium|Rep: Thioredoxin/PDI, cyanobacterial
type, signal peptide plus 4 transmembrane domains -
Cryptosporidium parvum Iowa II
Length = 664
Score = 34.3 bits (75), Expect = 3.5
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 141 LLTDITLMLAWNPEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTD 200
L+ D T+ +P+ A +V N + E + ++ + D ++I N +S + T+
Sbjct: 307 LIGDKTISGVVSPKTIAHMV-NINLKELS--EEVLALVHPDDKKEIENRISDFSEGSSTE 363
Query: 201 AMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPFLKKGQT-KDKKDEFPD 259
A T T T +S+ FG K + K L E + DK+D F
Sbjct: 364 ASTDTDTDSTEAQGEDISKE--LSSVSFGEGKVDLIAKELGEEIRNNNEVGDDKEDNFEQ 421
Query: 260 EDLTLEELEKIVNENQ 275
+EE++K V +N+
Sbjct: 422 SSEVVEEIQKDVQKNK 437
>UniRef50_Q54FN8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 832
Score = 34.3 bits (75), Expect = 3.5
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 9/183 (4%)
Query: 97 HNLNPDYIHNRLKELGKKYDLRVLLVQVDLKD-PHASLKNLTRICLLTDITLMLAWNPEE 155
+N N D ++ KE+ K+Y L +L + D+ + S K+ I LL + + + + +E
Sbjct: 212 NNNNNDNDRDKTKEILKQYQLSLLHTKKDIGSIVNNSFKDYKNITLLFNDSRIS--DIKE 269
Query: 156 AAKVVENYK-IYENKPPDRIMEKIEN--DPHQKIINALSSIKPVNKTDAMTLIKTFGTLE 212
+ K++ +++ EN ++I +IEN D KII +K + + + E
Sbjct: 270 SLKLIHSFENPNENPNENQIENQIENKIDEISKIIYKEIKLKEEKEKEEKEEKEEKEEKE 329
Query: 213 NIIKVSESRLAECPGFGITKAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVN 272
++ E + I K +++ K + + + K+KK +F +E TL + E + N
Sbjct: 330 EKVENDEKEEKQDKEKEIEKEEQIIKLYEKDHIDNNE-KEKKLKFKEE--TLYKKEDLFN 386
Query: 273 ENQ 275
N+
Sbjct: 387 VNE 389
>UniRef50_Q4QH40 Cluster: Tubulin-tyrsoine ligase-like protein; n=3;
Leishmania|Rep: Tubulin-tyrsoine ligase-like protein -
Leishmania major
Length = 1093
Score = 34.3 bits (75), Expect = 3.5
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 102 DYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKN--LTRICLLTDITLMLAWNPEEAAKV 159
+Y+H L GKK+DLRV ++ ++ P L N L RIC N ++A K
Sbjct: 355 EYVHRPLLLEGKKFDLRVYVLLTSIRHPSIFLFNDGLVRIC-TEPYETPNEENVKQACKH 413
Query: 160 VENYKI 165
+ NY +
Sbjct: 414 LTNYAV 419
>UniRef50_A7SIZ4 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 542
Score = 34.3 bits (75), Expect = 3.5
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 123 QVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKI 165
QV + ++ K++ R+C+L + L L W P E+ +++ YK+
Sbjct: 382 QVSTQQGDSAKKSVVRMCMLAALLLTLCWFPTESFWILKQYKV 424
>UniRef50_Q58900 Cluster: Putative ATP-dependent RNA helicase
MJ1505; n=2; Methanococcales|Rep: Putative ATP-dependent
RNA helicase MJ1505 - Methanococcus jannaschii
Length = 778
Score = 34.3 bits (75), Expect = 3.5
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 104 IHNRLKELGKKYDLRVLLVQVD-LKDPHASLKNLTRICLLTD--ITLMLAWNPEEAA--- 157
+ ++LK L KK + +L+V+ + H + + ++ D I ++ N EE A
Sbjct: 630 LFSQLKNL-KKVEKPLLIVEGENFSRLHENALKGAILSIILDFGIPIIFTKNAEETADLL 688
Query: 158 -KVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIK 216
K+ E +I E + K ++ + S+ V A L+K F T+EN+
Sbjct: 689 IKIAEKEQIKEKRTVMVRYGKTAMSLKEQQKFIVESLPDVGGALAERLLKHFKTVENVFT 748
Query: 217 VSESRLAECPGFGITKAKKLYKAL 240
E L + G G +AKK+ + L
Sbjct: 749 AKEEELMKVEGVGKERAKKIREVL 772
>UniRef50_Q2ACP1 Cluster: Competence protein ComEA
helix-hairpin-helix region; n=1; Halothermothrix orenii
H 168|Rep: Competence protein ComEA helix-hairpin-helix
region - Halothermothrix orenii H 168
Length = 245
Score = 33.9 bits (74), Expect = 4.6
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 155 EAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENI 214
+ K+V KI NK D + + + K ++ S + VNK + + + + N+
Sbjct: 129 DGEKIVIPAKIKSNKGEDPAL--LNDITGSKPVSVSRSREEVNKNNELLITDKYPEKINL 186
Query: 215 IKVSESRLAECPGFGITKAKKLYKALHE 242
+ S+ +L + PG G +KA+ + K E
Sbjct: 187 NRSSQEQLQKLPGIGPSKARSIVKYREE 214
>UniRef50_O30253 Cluster: DNA repair protein, putative; n=1;
Archaeoglobus fulgidus|Rep: DNA repair protein, putative
- Archaeoglobus fulgidus
Length = 208
Score = 33.9 bits (74), Expect = 4.6
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 173 RIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITK 232
+I+ ++++ + KI L++I + + A L+ FG+++ I S + L G G K
Sbjct: 141 KILPRLKSHENPKIA-MLTAIPGIGEKKAEKLLDYFGSIQRIANASIAELKRVDGIGEKK 199
Query: 233 AKKLYK 238
A+++Y+
Sbjct: 200 AREIYR 205
>UniRef50_Q0G696 Cluster: Transcriptional regulator, putative; n=2;
Aurantimonadaceae|Rep: Transcriptional regulator,
putative - Fulvimarina pelagi HTCC2506
Length = 157
Score = 33.5 bits (73), Expect = 6.0
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 222 LAECPGFGITKAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVNEN 274
LA+ GF +T+A++L H+P K+ Q + + F ++ + L E ++ + E+
Sbjct: 85 LAKVLGFSLTEARQLIDLYHQPDGKRKQLELALERFEEQQIILHEQKREIEES 137
>UniRef50_A2BWW3 Cluster: Helix-hairpin-helix DNA-binding motif
class 1; n=5; Prochlorococcus marinus|Rep:
Helix-hairpin-helix DNA-binding motif class 1 -
Prochlorococcus marinus (strain MIT 9515)
Length = 110
Score = 33.5 bits (73), Expect = 6.0
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 177 KIENDPHQKIINALSSIKPVNKTDAMTLIKT-FGTLENIIKVSESRLAECPGFGITKAKK 235
K + D +K+I AL +I V A K F T + I ++ L PG GI KK
Sbjct: 46 KTKKDEQKKLIEALKAIPGVGAKSAEAFYKAGFKTPKAITSANDEDLLAVPGVGINLVKK 105
Query: 236 L 236
L
Sbjct: 106 L 106
>UniRef50_Q7RQH8 Cluster: Putative uncharacterized protein PY01119;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01119 - Plasmodium yoelii yoelii
Length = 1141
Score = 33.5 bits (73), Expect = 6.0
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 160 VENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSE 219
V + KIYE K ++ M+K E Q +IN ++ I VN+ +K + L+N E
Sbjct: 828 VHDLKIYEKKKNNKYMKKKEKKKKQALINKINKI-DVNQIFTFEELKNYLFLQNHSISQE 886
Query: 220 SRLAE 224
+++ E
Sbjct: 887 TKITE 891
>UniRef50_A0CVL6 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 433
Score = 33.5 bits (73), Expect = 6.0
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 152 NP-EEAAKVVENYKIYENKPPDRIMEK---IENDPHQKIINALSSIKPVNKT 199
NP EEA K + ENK DR K I +PHQKI+N S I+P +T
Sbjct: 346 NPTEEALKKETEQQEKENKVVDRKASKNRKIRFEPHQKIVNFTSRIEPPVET 397
>UniRef50_Q0U1E7 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 334
Score = 33.5 bits (73), Expect = 6.0
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 79 PDYEVGKTICLLFLSLRYHNLNPDYIHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTR 138
P+Y+V + L L N+ Y ++ E VLL V + P + L
Sbjct: 210 PEYDVWVNMSLSLYQLAGENITYTYNQAQVTEA-------VLLQPVVYEFPQVKARTLLM 262
Query: 139 ICLLTDITLMLAWNPEEAAKVVENYKIYENKPPDRI 174
I + + AW+P + K++ NY + K D I
Sbjct: 263 IGTKDNTAIGKAWSPPDVQKILGNYSVLGRKTADAI 298
>UniRef50_Q12XG3 Cluster: ERCC4-like helicase; n=1; Methanococcoides
burtonii DSM 6242|Rep: ERCC4-like helicase -
Methanococcoides burtonii (strain DSM 6242)
Length = 769
Score = 33.5 bits (73), Expect = 6.0
Identities = 31/152 (20%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 103 YIHNRLKELGKKYDLRVLLVQVD------LKDPHASLKNLTRICLLTDITLMLAWNPEEA 156
+I ++ +L Y+ +L+++ + + +P+A L + L ++++ + E+
Sbjct: 616 HIFRQISDLAGAYEKPILIIEGEGLFTTRMVNPNAIHGMLASLSLDFGVSILHTRDAEDT 675
Query: 157 AKVV----ENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLE 212
A ++ + +I E + +K Q+ +SSI + A L+ FGT+E
Sbjct: 676 ASLIGILAKREQIDEKRSTSVHGKKSSMMLSQQQEYIVSSISNIGPNAAKNLLDHFGTVE 735
Query: 213 NIIKVSESRLAECPGFGITKAKKLYKALHEPF 244
N++K L E G A K+ + L +
Sbjct: 736 NVMKAELDELKEVKNIGPKTAGKMREILSSKY 767
>UniRef50_P41474 Cluster: Uncharacterized 21.7 kDa protein in
GP41-PNK intergenic region; n=3;
Nucleopolyhedrovirus|Rep: Uncharacterized 21.7 kDa
protein in GP41-PNK intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 188
Score = 33.5 bits (73), Expect = 6.0
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 104 IHNRLKELGKKYDLRVLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENY 163
I + K L DL + + V LK P LK+L +CL+ DI L ++ N
Sbjct: 76 IKRKNKSLKSLQDLCLDKIAVSLKKPFRQLKSLNAVCLMRDIIFSL------GLPIIFNP 129
Query: 164 KIYENKPPDRIMEKIENDPHQKIIN 188
+ + K P R + N ++ N
Sbjct: 130 ALLQRKVPQRSVGYFMNSKLERFAN 154
>UniRef50_Q6NAL3 Cluster: UvrABC system protein C; n=38;
Alphaproteobacteria|Rep: UvrABC system protein C -
Rhodopseudomonas palustris
Length = 704
Score = 33.5 bits (73), Expect = 6.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 190 LSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALH 241
L I + T L+ FGTL+ I + S + L + PG AK++++ H
Sbjct: 649 LQEIPGIGPTRKRALLLHFGTLKEIERASIADLGKVPGISAESAKRIFEFFH 700
>UniRef50_Q8G6E0 Cluster: UvrABC system protein C; n=5;
Bifidobacterium|Rep: UvrABC system protein C -
Bifidobacterium longum
Length = 746
Score = 33.5 bits (73), Expect = 6.0
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 188 NALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHE 242
+AL I + ++ L+ FG+++ + + S + G G KA+ LY ALHE
Sbjct: 691 SALDEIPGIGESYQKRLLNHFGSVKAMREASVEDFEKVKGIGHAKAEALYNALHE 745
>UniRef50_Q04110 Cluster: Protein ECM11; n=2; Saccharomyces
cerevisiae|Rep: Protein ECM11 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 302
Score = 33.5 bits (73), Expect = 6.0
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 143 TDITLMLAWNPEEAAKVVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAM 202
T++TL + E +K + K NKPP I + + P++ + A + K +N TD
Sbjct: 10 TEVTLYSPPSKESLSKDDAHRKKQNNKPPSSINSR--SGPNKHKLAAKAPEKKINNTDKQ 67
Query: 203 TLIKTFGTLENIIKVSESRLAE-CPGFGITKAKKLYKALHEPFL---KKGQTKDK--KDE 256
L I+K SES+ E + T K +P KK K+K ++
Sbjct: 68 DLSAFLLNPSLIVKPSESKKKENIVAYNDTPGIKTEHTAFQPLTPISKKRALKEKAASEK 127
Query: 257 FPDEDLTLEELEKIVNENQDIS 278
DL+ +E I +++ +S
Sbjct: 128 CDSFDLSRDEKPYIQKKSKTLS 149
>UniRef50_Q75AH6 Cluster: Mitochondrial aspartate-glutamate
transporter AGC1; n=2; Eremothecium gossypii|Rep:
Mitochondrial aspartate-glutamate transporter AGC1 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 911
Score = 33.5 bits (73), Expect = 6.0
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 237 YKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVNEN 274
++ LH K QT DE+ +E LTLE++ KIVN N
Sbjct: 455 FEWLHFKKRKSVQTNGLSDEYVNEALTLEDIMKIVNPN 492
>UniRef50_Q4AA00 Cluster: Putative uncharacterized protein; n=3;
Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
protein - Mycoplasma hyopneumoniae (strain J / ATCC
25934 / NCTC 10110)
Length = 792
Score = 33.1 bits (72), Expect = 8.0
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 103 YIHNRLKELGKKYDLR---VLLVQVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKV 159
++ N +K + KY + ++ + +D+KD +LK L + + I L E
Sbjct: 140 FLQNNIK-INSKYISKLSPIIWINIDVKDEDVALKLLEELDFIALIINNLPKTTSEKPFP 198
Query: 160 VENYKIYENKPPDRIMEKIENDPHQKIINALSSIKP 195
E +KI + ++ I ND H K+ L ++P
Sbjct: 199 FELFKITNQRFSNKWFHTILNDNHNKLWRLLRPVQP 234
>UniRef50_Q3AF80 Cluster: DNA repair protein RadC; n=1;
Carboxydothermus hydrogenoformans Z-2901|Rep: DNA repair
protein RadC - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 226
Score = 33.1 bits (72), Expect = 8.0
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 201 AMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKAL 240
A+ L+ TFG L+ +I+V +L G G KA KL AL
Sbjct: 49 ALRLLTTFGGLKGLIEVHPEQLKSFKGIGQAKAAKLLAAL 88
>UniRef50_A6DJX5 Cluster: SMF family protein involved in DNA uptake;
n=1; Lentisphaera araneosa HTCC2155|Rep: SMF family
protein involved in DNA uptake - Lentisphaera araneosa
HTCC2155
Length = 380
Score = 33.1 bits (72), Expect = 8.0
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 183 HQKIINALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKL 236
H +N L + P L+K F ENI K S L +CPG G A+++
Sbjct: 7 HDVCLNMLPGVGPRTYNK---LVKKFKKSENIFKASRKELLKCPGIGPRVAEEI 57
>UniRef50_A3I2H2 Cluster: DNA ligase; n=1; Algoriphagus sp. PR1|Rep:
DNA ligase - Algoriphagus sp. PR1
Length = 791
Score = 33.1 bits (72), Expect = 8.0
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 131 ASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKIYENKPPDRIMEKI---ENDPHQKII 187
AS ++ T +L D+ L L+ E K ++ ++ +ME I + P +K++
Sbjct: 574 ASKRHGTVHRILLDLDLELSQELRERIKKLKA-NTFQEGVISNMMEGIAASKKQPFEKVL 632
Query: 188 NALSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALHEPFLKK 247
AL ++ + + A L + FG+++ + + S L E G G T L +++HE F ++
Sbjct: 633 FALG-VRNIGENTAALLAQHFGSIDKLNEASTEELLEINGVGET----LVQSIHEFFSRQ 687
>UniRef50_A5GYL8 Cluster: Putative uncharacterized protein; n=4;
Lactococcus phage ul36|Rep: Putative uncharacterized
protein - Lactococcus phage ul36.k1t1
Length = 349
Score = 33.1 bits (72), Expect = 8.0
Identities = 26/121 (21%), Positives = 60/121 (49%), Gaps = 9/121 (7%)
Query: 159 VVENYKIYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTL--ENIIK 216
+++NY + ++ + I ++I +IN+ + +P+ K ++ +K+F L + ++
Sbjct: 187 ILDNYAVDDSTRIEGIQKEISE--LSALINSFQTTQPLTKQGLISTVKSFFNLKKQEEVE 244
Query: 217 VSESRLAECPGFGIT----KAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEELEKIVN 272
+++ L + G + + L KA +P + KDK+DE + L + + K V+
Sbjct: 245 MTQEELKKALGEAFAPINDRLEALEKATKDPEADPKKKKDKEDE-EETALDAKAVAKAVS 303
Query: 273 E 273
E
Sbjct: 304 E 304
>UniRef50_A7SIZ5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 597
Score = 33.1 bits (72), Expect = 8.0
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 123 QVDLKDPHASLKNLTRICLLTDITLMLAWNPEEAAKVVENYKI 165
QV + A+ KN+ R+C+L + L L W P E ++ +K+
Sbjct: 188 QVSTQHGDAAKKNVVRMCMLAALLLTLCWFPTETFWILLQHKV 230
>UniRef50_A2FMQ5 Cluster: Leucine Rich Repeat family protein; n=1;
Trichomonas vaginalis G3|Rep: Leucine Rich Repeat family
protein - Trichomonas vaginalis G3
Length = 1090
Score = 33.1 bits (72), Expect = 8.0
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 165 IYENKPPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLE-NIIKVSESRLA 223
I ENK P+ I K N PH ++ + I+P K + ++ + + E ++IK +
Sbjct: 763 IVENKEPEVISNKTSNPPHSRV----AFIEPDQKEQPVIIVSSDDSDEDDVIKSKNFDIN 818
Query: 224 ECPGFGITKAKKLYKALHEPFLKKGQTKDKKDEFPDEDLTLEE 266
+ FG KK + Q K KK P L L++
Sbjct: 819 DEKVFGQKVTKKRSLKPDSESEDEIQVKPKKSNTPKRKLKLDD 861
>UniRef50_Q8PX35 Cluster: ATP-dependent RNA helicase, EIF-4A family;
n=3; Methanosarcina|Rep: ATP-dependent RNA helicase,
EIF-4A family - Methanosarcina mazei (Methanosarcina
frisia)
Length = 864
Score = 33.1 bits (72), Expect = 8.0
Identities = 33/151 (21%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 107 RLKELGKKYDLRVLLVQ-VDLK-----DPHASLKNLTRICLLTDITLMLAWNPEEAA--- 157
+L +L + Y+ VL+++ DL +P+A +L I + ++++ + + EE A
Sbjct: 715 QLSDLARVYEKPVLIIEGEDLFTSRQINPNAIYGSLASIAIDFGVSILYSRDEEETASIL 774
Query: 158 KVVENYKIYENK----PPDRIMEKIENDPHQKIINALSSIKPVNKTDAMTLIKTFGTLEN 213
K++ + ENK P + + + +I+++S+I P A L+ FG++E
Sbjct: 775 KILAKREQTENKREINPHGKKSASTLAEQQEYLISSISNIGP---KAARNLLSYFGSVEA 831
Query: 214 IIKVSESRLAECPGFGITKAKKLYKALHEPF 244
+++ L + G A ++ + L P+
Sbjct: 832 VMRADIEELKKVKQIGPKTAARIREVLESPY 862
>UniRef50_Q6NH31 Cluster: UvrABC system protein C; n=3;
Corynebacterium|Rep: UvrABC system protein C -
Corynebacterium diphtheriae
Length = 687
Score = 33.1 bits (72), Expect = 8.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 190 LSSIKPVNKTDAMTLIKTFGTLENIIKVSESRLAECPGFGITKAKKLYKALH 241
L IK + L+ FG+++ + K SES + G G A +Y ALH
Sbjct: 627 LDDIKGLGPARRKVLVAHFGSVKELKKASESEIMMVNGIGPALAHSIYVALH 678
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.315 0.135 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 301,465,018
Number of Sequences: 1657284
Number of extensions: 12294184
Number of successful extensions: 28739
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 28618
Number of HSP's gapped (non-prelim): 122
length of query: 278
length of database: 575,637,011
effective HSP length: 100
effective length of query: 178
effective length of database: 409,908,611
effective search space: 72963732758
effective search space used: 72963732758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 72 (33.1 bits)
- SilkBase 1999-2023 -