GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002482-TA|BGIBMGA002482-PA|IPR010994|RuvA domain 2-like,
IPR004579|DNA repair protein rad10
         (278 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.        25   3.2  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    25   3.2  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    25   3.2  

>DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.
          Length = 264

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/37 (32%), Positives = 25/37 (67%), Gaps = 3/37 (8%)

Query: 236 LYKALHEPFLKKGQTKDKKDEFPD--EDLTLEELEKI 270
           L+ A+H P +++   ++  D FPD  +D+ +E+L+K+
Sbjct: 85  LFLAMH-PAIQERVYREVMDVFPDPDQDIEVEDLKKL 120


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 248 GQTKDKKDEFPDEDLTLEELEKIVNENQDI 277
           G   +  +E+ DE+  LE ++KI++   DI
Sbjct: 311 GAASESLNEWADEEAGLEAIQKILDSLDDI 340


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/35 (25%), Positives = 18/35 (51%)

Query: 45  RSSKTHCVLVNKNQRGNPLLKHITSVPWEYDDIVP 79
           +SS        +N   + L +H+ +V + +D+ VP
Sbjct: 89  KSSNLKSTTYTRNTENDKLTRHLNTVKFSFDEPVP 123


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.135    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,270
Number of Sequences: 2123
Number of extensions: 11400
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 278
length of database: 516,269
effective HSP length: 63
effective length of query: 215
effective length of database: 382,520
effective search space: 82241800
effective search space used: 82241800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 47 (23.0 bits)