GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002481-TA|BGIBMGA002481-PA|IPR001005|Myb, DNA-binding,
IPR009057|Homeodomain-like, IPR009053|Prefoldin
         (751 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   4.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    24   4.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 527 LRDPPEGVDKKRAIQLQASHLAYLEQH 553
           LR  PEG    R + +  S + YL QH
Sbjct: 206 LRLKPEGRISNRRVFISFSKICYLHQH 232


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 527 LRDPPEGVDKKRAIQLQASHLAYLEQH 553
           LR  PEG    R + +  S + YL QH
Sbjct: 224 LRLKPEGRISNRRVFISFSKICYLHQH 250


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.127    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,632
Number of Sequences: 317
Number of extensions: 5116
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 2
length of query: 751
length of database: 114,650
effective HSP length: 62
effective length of query: 689
effective length of database: 94,996
effective search space: 65452244
effective search space used: 65452244
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)