Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002481-TA|BGIBMGA002481-PA|IPR001005|Myb, DNA-binding,
IPR009057|Homeodomain-like, IPR009053|Prefoldin
(751 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 279 1e-75
SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription te... 51 7e-07
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 42 2e-04
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 36 0.021
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 36 0.027
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 35 0.048
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 35 0.048
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 34 0.063
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 32 0.34
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 31 0.44
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 31 0.59
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 31 0.59
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 31 0.77
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 30 1.0
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 30 1.4
SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyce... 30 1.4
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 1.4
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 29 1.8
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 29 2.4
SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosa... 29 3.1
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 28 5.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 7.2
SPAC3G9.15c |fcf2||rRNA processing protein Fcf2 |Schizosaccharom... 27 7.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 7.2
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 7.2
SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyc... 27 9.5
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 27 9.5
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 27 9.5
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 27 9.5
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 27 9.5
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 279 bits (684), Expect = 1e-75
Identities = 141/210 (67%), Positives = 160/210 (76%), Gaps = 13/210 (6%)
Query: 4 IMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEW 63
+++KGG W+NTEDEILKAAV KYGKNQW+RI+SLL RK+ KQCKARWYEW+DPSIKKTEW
Sbjct: 2 VVLKGGAWKNTEDEILKAAVSKYGKNQWARISSLLVRKTPKQCKARWYEWIDPSIKKTEW 61
Query: 64 SREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKE---------EGE 114
SREEDEKLLHLAKL+PTQWRTIAPI+GRTA QCLERY+ LLD + KE EG
Sbjct: 62 SREEDEKLLHLAKLLPTQWRTIAPIVGRTATQCLERYQKLLDDLEAKENEQLGLISGEGA 121
Query: 115 DMG---DDPR-KLKPGEIDPNPETKPARPDPKXXXXXXXXXXSEARARLANTQGKKAKRK 170
+ +DP +L+ GE +PN ET PA PD SEARARLANTQGKKAKRK
Sbjct: 122 EAAAPVNDPNSRLRFGEAEPNLETLPALPDAIDMDEDEKEMLSEARARLANTQGKKAKRK 181
Query: 171 AREKQLEEARRLAALQKRRELSAAGIAVPL 200
REKQLE RRL+ LQKRREL AAGI + L
Sbjct: 182 DREKQLELTRRLSHLQKRRELKAAGINIKL 211
Score = 61.3 bits (142), Expect = 5e-10
Identities = 79/303 (26%), Positives = 121/303 (39%), Gaps = 42/303 (13%)
Query: 236 KRSKLVLPEPQVTDQELQQVVKLGXXXXXXXXXXXXX-XXXXTDALVAQYXXXXXXX--- 291
KR KL LP P V+ EL +VVKLG + L+ +Y
Sbjct: 308 KRRKLNLPSPTVSQDELDKVVKLGFAGDRARAMTDTTPDANYSTNLLGKYTQIERATPLR 367
Query: 292 --XXXXXXXQHDRILMEAQNVMALTHVDTPLKGGLNTPLHE--SDFSGALPQNQVVATPN 347
+ D + +E +N + + L G + PL + ++G P + A
Sbjct: 368 TPISGELEGREDSVTIEVRNQLMRNREQSSLLGQESIPLQPGGTGYTGVTPSH---AANG 424
Query: 348 TVLATPFRSSRSEVSTPGSFNTPGHGNSQLGLTPGLRDKLNINPEDRVNGGDTPQISHQL 407
+ LA P +TP F TP RD +IN G + +++
Sbjct: 425 SALAAP-------QATP--FRTP-------------RDTFSINAAAERAGRLASERENKI 462
Query: 408 QKQAKTSVRNALQSLPVPRNDYEIVVPEQEAGEDKDDSAAVVSVEDQADADARYAKEQEE 467
+ +A +R L LP P+NDYE++ P + A E ++ V ED D + R + E
Sbjct: 463 RLKA---LRELLAKLPKPKNDYELMEP-RFADETDVEATVGVLEEDATDRERRIQERIAE 518
Query: 468 KRAAELSRRSLAVQRGAARPADVNVSVLRGAASLSALTPLQHAEELLKAEMVTMLHYDAL 527
K +RRS +QR RP+ + SL P A LLK EM+ ++ DA+
Sbjct: 519 KERLAKARRSQVIQRDLIRPSVTQPE--KWKRSLENEDPT--ANVLLK-EMIALISSDAI 573
Query: 528 RDP 530
P
Sbjct: 574 NYP 576
Score = 36.3 bits (80), Expect = 0.016
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 665 LIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDVSRQTEREKLLQKRYSE 724
LIK+ ++ L+ ++FL QE+ A+P R+E+ ++S+ + E Q+ Y+
Sbjct: 693 LIKKISHAWKALQTERKNLTCYEFLYNQERLALPNRLEAAEIELSKMQQIEAYAQQDYAR 752
Query: 725 LQAE 728
+ +
Sbjct: 753 VTGQ 756
>SPBC1198.11c |reb1|SPBC660.01c|RNA polymerase I transcription
termination factor Reb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 504
Score = 50.8 bits (116), Expect = 7e-07
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 10 VWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWL--DPSIKKTEWSREE 67
VW EDE L+ V+++GK W++I + R C+ RW + + +K+ WS EE
Sbjct: 315 VWSKEEDEELRKNVVEHGK-CWTKIGRKMAR-MPNDCRDRWRDVVRFGDKLKRNAWSLEE 372
Query: 68 DEKLLHL-AKLMPTQ-------WRTIAPIIG-RTAAQCLERYEYLLDQAQKKEEGEDM 116
+ +LL + A+L + W +A ++G RT QC +++ L A K E E++
Sbjct: 373 ETQLLQIVAELRNREDLSSDINWTLVAQMLGTRTRLQCRYKFQQLTKAASKFELQENV 430
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 42.3 bits (95), Expect = 2e-04
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 319 PLKGGLNTPLHESDFSGALPQNQVVATPNTVLATPFRSS--RSEVSTPGSFNTPGHGNSQ 376
PL G N P + FS V N ++P SS +S +S G N GH
Sbjct: 902 PLNNGANVPALLNSFSSPQLSPLVNRVLNEPSSSPLSSSSLKSPLSKEGVLNQQGHEQYN 961
Query: 377 LGLTPGLRDKLNINPEDRVNGGDTPQISHQLQKQAKTSVRNALQSLPVPRNDYEIVVPEQ 436
L+P +R+KL +P R + G +P++ + L + T R ++L + D I
Sbjct: 962 FSLSPSIRNKL--SPICRPSQGSSPKLKNNL---SNTEERMGSRALLDDKTDSVITASNS 1016
Query: 437 -EAGEDKDDSA 446
+G +D+S+
Sbjct: 1017 TTSGLSRDESS 1027
Score = 31.1 bits (67), Expect = 0.59
Identities = 18/79 (22%), Positives = 39/79 (49%)
Query: 670 QELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDVSRQTEREKLLQKRYSELQAEV 729
+E ++ +++ L+L T + E+ + L E Q REK+ Q+R ++L E+
Sbjct: 517 EEDEEDVDEDELDLMTDEQRMEEGRRMFQIFAARLFEQRVLQAYREKVAQQRQAKLLEEI 576
Query: 730 ENMQKGKKSQVSENVNSQK 748
E K K+ + + + ++
Sbjct: 577 EEENKRKQERELKKIREKE 595
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 35.9 bits (79), Expect = 0.021
Identities = 29/166 (17%), Positives = 70/166 (42%), Gaps = 4/166 (2%)
Query: 581 MSHGDLSIDAYTQVWEECLAQVLFLPGQHRYTRANLASKKDRLESAEKRLEQNRNHXXXX 640
+S S+ ++E LA+ + ++ ++L + +L + + LE N
Sbjct: 572 LSESKNSLQTLCNAFQEKLAKSVMQLKENEQNFSSLDTSFKKLNESHQELENNHQTITKQ 631
Query: 641 XXXXXXXXXXLRVLTGGYQSRAAALIKQFQELQDQIEQANLELSTFKFLAEQEKA-AIPR 699
L++ ++ + + L + +L+ ++ LE S + +QE ++ +
Sbjct: 632 LKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKL--LKLEESNKSLIKKQEDVDSLEK 689
Query: 700 RIESLTEDVSRQTEREKLLQKRYSELQAEVENMQKGKKSQVSENVN 745
I++L ED+ + E + + L+ ++N+ KGK + N
Sbjct: 690 NIQTLKEDLRKSEEALRFSKLEAKNLREVIDNL-KGKHETLEAQRN 734
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 35.5 bits (78), Expect = 0.027
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 51 YEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLL 104
Y+ LDP + W E +KL L + T+W +IA +G + A C+ ++ +++
Sbjct: 319 YKPLDPK-DRNAWEESELKKLYTLVEQEGTRWNSIANKLGTSPAACMSQWRFVV 371
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 11 WRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTE-----WSR 65
W +E + L V + G +W+ IA+ L A C ++W + S ++T W+
Sbjct: 330 WEESELKKLYTLVEQEG-TRWNSIANKLGTSPAA-CMSQWRFVVGTSTQETIDRRKLWTN 387
Query: 66 EEDEKLLHLAK 76
EE+ KLL L K
Sbjct: 388 EEEAKLLDLVK 398
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 34.7 bits (76), Expect = 0.048
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 662 AAALIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDVSRQTEREKL--LQ 719
AAA ++ E++ QI++ E+S K L +EK +++L +S REK+ +
Sbjct: 82 AAATPEELAEMEKQIQELKDEVSVVKTL-YKEKCI---ELQALNNSLSPAEIREKIQSID 137
Query: 720 KRYSELQAEVENMQKGKKSQVSENVNSQKT 749
K E +++E+++ G Q+S+ QKT
Sbjct: 138 KEIEETSSKLESLRNGTVKQISKEA-MQKT 166
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 34.7 bits (76), Expect = 0.048
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 660 SRAAALIKQFQELQDQIEQANLELSTFKF---LAEQEKAAIPRRIESLTED---VSRQTE 713
S +L ++F E+ ++I A LE+S + ++ A RRI L D + E
Sbjct: 830 SELESLNQRFTEISERIPSAELEISKLQLDVSACDRLVAGEERRILQLKSDLKSIRNNNE 889
Query: 714 REKLLQKRYSELQAEVENMQKGKKSQVSE 742
R++ LQ + S + EVE + + V+E
Sbjct: 890 RKRNLQNKISNMDKEVEAININNEGLVTE 918
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 34.3 bits (75), Expect = 0.063
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 659 QSRAAALIKQFQELQDQIEQANLELSTFKFLAEQEKA--AIPRRIESLTEDVSRQTEREK 716
+ + A L +Q EL ++I+ + S + K P I+ L E+V Q
Sbjct: 230 EKKLAGLAQQNTELNEKIQLFEQKRSNYSSDGNISKILETDPTSIKELEEEVETQKRLTA 289
Query: 717 LLQKRYSELQAEVENMQKGKKSQVS 741
L + + SELQ+EV +Q+ SQ S
Sbjct: 290 LWESKSSELQSEVAALQEKLTSQQS 314
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 31.9 bits (69), Expect = 0.34
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Query: 309 NVMALTHVDTPLKGGLNTPLHESDFSGALPQNQVVATPNTVLATP-FRSSRSE-VSTPGS 366
N+ +++P NT S+ S + + + TP +TP FRS +S V+ P S
Sbjct: 115 NIETPVKIESPHVSQNNTFQSYSELSPNVETSLTMKTPPAHASTPKFRSHKSHRVAVPMS 174
Query: 367 FNTPGHGNSQLGLTPGLRDKLNINPEDRVNGGD--TPQISHQLQKQAKTS-VRNALQSLP 423
F +S L +P ++L + +P+ISH+LQ A +S +++
Sbjct: 175 FMD----SSALHTSPAFSERLKLLSSSNNFSPQLRSPKISHRLQTSATSSPLQHKRPFTN 230
Query: 424 VPR---NDYEIV-VPEQEAGEDKDDSAAVVSVEDQADADARYAKEQEEKRA 470
VP D E + E + V S E+ + Y +Q K +
Sbjct: 231 VPERVSRDIEFAPLDSARPSESSSPYSEVDSAEEDDELFQNYVLQQTRKES 281
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 31.5 bits (68), Expect = 0.44
Identities = 41/202 (20%), Positives = 76/202 (37%), Gaps = 12/202 (5%)
Query: 357 SRSEVSTPGSFNTPGHGNSQLGLTPGLRDKLNINPEDRVNGGDTPQISHQLQKQAKTSVR 416
S + G +P +S +G T ++P + G + + +KQA +
Sbjct: 4 SAEQAKKDGKDQSPVSESSSVGGTSPATASSVVSPNEPKLSGKEAKALKKARKQASRRAK 63
Query: 417 N---ALQSLPVPRNDYEIVVPEQEAGEDKDDSAAVVSVEDQADADARYAKEQEEKRAAEL 473
A + P + ++ +P + + + K S + DA+ + K EEK+ +
Sbjct: 64 AEAAAANNPPGVSEEKKVAIPNKNSNQQKKASKQNPQNSPETDANLQEKKIFEEKQVSIF 123
Query: 474 SRRSLAVQRGAAR-PADVNVSVLR---GAASLSALTPLQHAEELLKAEMVTMLHYDALRD 529
S +R P D++ +V+R A+ Q +LLK + + Y
Sbjct: 124 SHLDWRRRRTTENIPKDIHPAVIRLGLKLANYKIFGSNQRCIDLLKTFKIVIQDYQT--- 180
Query: 530 PPEGVDKKRAIQLQA-SHLAYL 550
P G R + S +AYL
Sbjct: 181 -PYGTTLSRHLTTHINSQIAYL 201
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 31.1 bits (67), Expect = 0.59
Identities = 18/80 (22%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 666 IKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLT---EDVSRQTEREKLLQKRY 722
+ +E+++Q+E + + E+EK + R++E LT +V R T + + L +Y
Sbjct: 94 VSDSKEMEEQLELQKSQFEKRISILEKEKEDLQRKMEELTVESMEVVRLTRQVETLSTQY 153
Query: 723 SELQAEVENMQKGKKSQVSE 742
S +++ + KK ++ +
Sbjct: 154 SIQRSQWVREDEKKKKEIQD 173
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 31.1 bits (67), Expect = 0.59
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 7/129 (5%)
Query: 392 EDRVNGGDTPQISHQLQKQAKTSVRNALQSLPVPRNDYEIVVPEQEAGEDKDDSAAVVSV 451
EDR N + + +++++ V N + V E+V + D +
Sbjct: 402 EDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSVDTKPPKKTQKI 461
Query: 452 EDQADADARYAKEQEEKRAAELSRRSLAVQRGAARPADVNVSVLRGAASLSALTPLQHAE 511
+ A D E+ R+ + R L R A R + + R AA++S++ L A
Sbjct: 462 DAPAPVDLVNLSEKTSNRSLGATNRELINNRAANR-----LGLSREAAAVSSVNKL--AA 514
Query: 512 ELLKAEMVT 520
LKA++V+
Sbjct: 515 SALKAQLVS 523
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 30.7 bits (66), Expect = 0.77
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 437 EAGEDKDDSAAVVSVEDQADADARYAKEQEEKRAAELSRRSLAVQRGAARPADVNVSVLR 496
E G++ DDS + V+ + + + E+EEK A R + ++G++ ++ V +
Sbjct: 532 EDGQNSDDSGGWIDVDSDDNIELSDSDEEEEKATA----RKESDEKGSSSQKEL-VDRMT 586
Query: 497 GAASLSALTP--LQHAEEL 513
AS S LTP L+ EEL
Sbjct: 587 ELASQSILTPNDLKKLEEL 605
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 652 RVLTGGYQSRAAALIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDVSRQ 711
++ ++ AL Q LQ Q+E+A E KA + + + L + S+Q
Sbjct: 367 KISNSNWEEERRALKADNQTLQKQLEKAIQERQDMSDFLNNFKADMAKSDKLLMQQQSQQ 426
Query: 712 TEREKLLQKRYSELQAE--VENMQKGKKSQVSENV 744
T + L+ + LQ E VE ++ + Q+SE++
Sbjct: 427 TGDLETLRLQLQALQEELRVEREERQQLIQMSEDL 461
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 401 PQISHQLQKQAKTSVRNALQSLPVPRNDYEIVVPEQEAGEDKDDSAAVVSVEDQA--DAD 458
PQIS + Q K +++ A+Q + + E +E + + A E+QA +A+
Sbjct: 515 PQISEEEASQRKDAIKLAIQQRIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAE 574
Query: 459 ARYAKEQEEKRAAELSRRS-LAVQRGAARPAD 489
+ +E EEK E ++ + A R A+
Sbjct: 575 EKAKREAEEKAKREAEEKAKREAEENAKREAE 606
>SPBC28F2.02 |mep33||mRNA export protein Mep33|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 292
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 120 PRKLKPGEIDPNPETKPARPDP-KXXXXXXXXXXSEARARLANTQGKKAKRKAREKQLEE 178
P+K G+ DP K A+ DP K ++ R+ + ++ ++ A ++
Sbjct: 3 PKKAAKGKGDPG---KAAKKDPTKKAADATFGLKNKNRSTKVQAKIRQIEQNAAASGSKD 59
Query: 179 ARRLAALQKRRE 190
A+R AL+KRRE
Sbjct: 60 AKRQEALRKRRE 71
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 664 ALIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDVSRQTEREKLLQKRYS 723
AL K+ QEL+ ++++ E TFK Q+ ++ +E+L ++V + + L ++
Sbjct: 1363 ALEKEKQELETKLQETAKETDTFK----QQVNSLNEEVENLKKEVEQANTKNTRLAAAWN 1418
Query: 724 ELQAEVENMQK 734
E + EN++K
Sbjct: 1419 E---KCENLKK 1426
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 312 ALTHVDTPLKGGLNTPLHESDFSGALPQNQVVATPNTVLATPFRSSRSEVSTPGSFNTPG 371
A +V PL P S + P V T NT T S ++ + PG+ N P
Sbjct: 156 ACNNVSAPLIANNCAP---SFYQSRHPVADVPVTNNTATTT----SETDNTIPGNLNMPS 208
Query: 372 HGNSQLGLTPGLRDKLNINPEDRVNGGDTPQISHQLQKQAK 412
N Q ++P + + E GG ++ +++ + +
Sbjct: 209 VANVQQRISPVCKTNMEDQEETVYTGGVAAKLDYKMDQMVE 249
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 651 LRVLTGGYQSRA-AALIKQFQELQDQIEQANLELSTFKF-LAEQEKAAIP-------RRI 701
L +LTG + ++LIK +++ + + N++LS F + ++ P RR
Sbjct: 285 LSMLTGPSEDITFSSLIKDIKKILNSLVW-NIKLSLINFGILSPSASSTPLTDSESYRRF 343
Query: 702 ESLTEDVSRQTEREKLLQKRYSELQAEVE 730
E+ D+ E EK L+K +++L E+E
Sbjct: 344 EAAQRDLDAAEENEKSLEKEHTKLMHELE 372
>SPAC22F8.07c |rtf1||replication termination factor
Rtf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 55 DPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERY 100
+P KK +W+ E++ +L L + T W I + R C + +
Sbjct: 251 NPFKKKCKWTIEDEAELKKLVEKHGTSWSLIGKLSNRLPMHCRDHW 296
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 689 LAEQEKAAIPRRIESLTEDVSRQT--EREKLLQKRYSELQAEVENMQKGKKSQVSENVNS 746
+ + KA I + +TE+ +RQ +RE+ L+++Y E Q + M+ K+ S S
Sbjct: 25 IEQLRKAQIREKAREITEERNRQRKLQRERELRQKYEEEQRRQQAME-AKRIAASTRQTS 83
Query: 747 QK 748
++
Sbjct: 84 ER 85
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Query: 383 LRDKLNINPEDRVNGGDTPQISHQLQKQAKTSVRNALQSLPVPRNDYEIVVPEQEAGEDK 442
L DK ED D I ++Q + + S P P N+ + +PE ++K
Sbjct: 4041 LEDKDRQEKEDEEEMSDDVGIDDEIQPDIQEN-----NSQPPPENEDHLDLPEDLKLDEK 4095
Query: 443 DDSAAVVSVEDQADADARYAKEQEEKRAAE 472
+ + S D D D A E +E+ AE
Sbjct: 4096 EGDVSKDS--DLEDMDMEAADENKEEADAE 4123
>SPAC3G9.15c |fcf2||rRNA processing protein Fcf2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 700 RIESLTEDVSRQTEREKLLQKRYSELQAEVENMQKGKKSQVSE 742
R E++ +++ +ER +K+Y ELQ + +KG+ ++ +
Sbjct: 180 RKETIVDELLHDSERRSYFKKKYLELQKSKMSGRKGQYKKLQQ 222
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 7.2
Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 7/142 (4%)
Query: 330 ESDFSGALPQNQVVATPNTVLATPFRSSRSEVSTPGS-FNTPGHGNS----QLGLTPGLR 384
+S F Q+QV A +++ S ST G F P S G G+
Sbjct: 459 QSAFQNTSFQDQVSTQNQANTADISQNTESGSSTQGQMFGIPPTTQSIPLKMAGFPGGVN 518
Query: 385 DKLNINPEDRVNGGDTPQISHQLQKQAKTSVRNALQSLPVPRNDYEIVVPEQEAGEDKDD 444
L E+ + PQ + +Q KTS+ A +++ + +P A
Sbjct: 519 SSLTDIKEEEAVSENAPQQEERSFEQIKTSIHIAPENISAIEESKSVPLPTSFATTIPGS 578
Query: 445 SAAVVSVEDQADADARYAKEQE 466
++A +++DQ +A + + E
Sbjct: 579 TSA--ALDDQQTTEAPFEEPDE 598
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 696 AIPRRIESLTEDVSRQTEREKLLQKRYSELQAEVENMQKGKKS 738
++ R E L E + + E +QK+ SEL+ E+ ++ +K+
Sbjct: 654 SLKRENEELREQLKVEHEENISMQKQLSELKGELNTLRSARKA 696
>SPAC1486.01 |||manganese superoxide dismutase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 218
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 491 NVSVLRGAASLSALTPLQHAEELLK---AEMVTMLHYD 525
NVS+ RG + + L PL +A L+ +E + LH+D
Sbjct: 15 NVSIARGVHTKATLPPLPYAYNALEPALSETIMKLHHD 52
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 154 EARARLANTQGKKAKRKAREKQLEEARR-LAALQKRRELSAAGIAVPLRFK 203
E R ++AN + K+K R K L+ RR A L E+ + PLR K
Sbjct: 181 EEREKIANELAHQEKQKERNKLLKSGRRNKAVLSFGDEVDMPIVKKPLRQK 231
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 27.1 bits (57), Expect = 9.5
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 666 IKQFQELQDQIEQANLELSTFKFLAEQEKA--AIPRRIESLTEDVSRQTEREKLLQKRYS 723
I ++L Q + + KFL++ E+A A+ RR + + E ++Q +KLL R
Sbjct: 7 IPSLEQLVQQKRVKEEKAARPKFLSKAERARLALERRQKEVEEAKAKQ--NDKLLDLRKR 64
Query: 724 ELQAEVENMQKG---KKSQVS 741
+EN + KKSQVS
Sbjct: 65 TFTNHLENNELADDEKKSQVS 85
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 27.1 bits (57), Expect = 9.5
Identities = 45/200 (22%), Positives = 82/200 (41%), Gaps = 26/200 (13%)
Query: 304 LMEAQNVMALTHVDTPLKGGLNTPLHESDFSGALPQNQVVATPNTVLATPFRSSRSEVST 363
L+E +NV L D +KG L++SD L + + + +T + S ++
Sbjct: 351 LLEFKNVRRLERKDLSVKG----MLYDSDSQQILNRLRERVSGSTAQSADEASGHESDAS 406
Query: 364 PGSFNTPGHG-NS----------QLGLTPGLRDKLN-INPEDRVNG--GDTPQISHQLQK 409
+F+ G NS LGL DK+ + D ++ SH L K
Sbjct: 407 EDTFSERTLGLNSIDNTEISEVVSLGLVSSALDKITGLLSADNLSETVSQARDFSHTLSK 466
Query: 410 QAKTSVRNALQSLPVPRNDYEIVVPEQEAGEDKDDSAAVVSVEDQADAD---ARYAKEQE 466
K+ ++ Q R+ +++ + G++ A++ S +D D R + EQE
Sbjct: 467 SLKSRAKSLSQKEAANRS--KLIA---KRGDNLRREASLSSEQDDLSEDFPPVRESDEQE 521
Query: 467 EKRAAELSRRSLAVQRGAAR 486
+ S ++++R AAR
Sbjct: 522 SRSGGRSSAMRVSIERSAAR 541
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 651 LRVLTGGYQSRAAALIKQFQELQDQIEQANLELSTFK 687
L ++ GGY R + + +ELQ+ EQ +L +T K
Sbjct: 263 LLLVAGGYDIRVSENRRYLKELQEFCEQKDLSYTTVK 299
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.312 0.127 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,839,333
Number of Sequences: 5004
Number of extensions: 105229
Number of successful extensions: 442
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 403
Number of HSP's gapped (non-prelim): 62
length of query: 751
length of database: 2,362,478
effective HSP length: 78
effective length of query: 673
effective length of database: 1,972,166
effective search space: 1327267718
effective search space used: 1327267718
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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