GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002481-TA|BGIBMGA002481-PA|IPR001005|Myb, DNA-binding,
IPR009057|Homeodomain-like, IPR009053|Prefoldin
         (751 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   3.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   3.2  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    26   3.2  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    25   7.3  
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         25   7.3  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         25   7.3  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         25   7.3  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         25   7.3  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   7.3  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 1/136 (0%)

Query: 608 QHRYTRANLASKKDRLESAEKRLEQNRNHXXXXXXXXXXXXXXLRVLTGGYQSRAAALIK 667
           + + T   +A+++ RL   +   ++N+                   +     +  A L  
Sbjct: 398 RRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQKTEVEAKLTANLATLKD 457

Query: 668 QFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTE-DVSRQTEREKLLQKRYSELQ 726
           + + L ++ E+   EL   K   ++ K+A+      L        TER KL   RYS  +
Sbjct: 458 ETKVLLEEKEKLQTELIELKRAVDESKSALSIAESELKICQHDEVTERRKLESLRYSYEE 517

Query: 727 AEVENMQKGKKSQVSE 742
            E +  +K  + Q  E
Sbjct: 518 TEKDLEEKRARLQTLE 533


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 12/54 (22%), Positives = 28/54 (51%)

Query: 689 LAEQEKAAIPRRIESLTEDVSRQTEREKLLQKRYSELQAEVENMQKGKKSQVSE 742
           L +QEKAA    ++ + E++++     + L K  + +   + N++   +S  S+
Sbjct: 882 LMKQEKAAHKTLVDQMEEEMAKARREVQALAKELAAIHQSIANIESRIESMKSK 935


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)

Query: 675 QIEQANLELSTFKF-LAEQEKAAIPRRIESLTEDVSRQTEREKLLQKRYSELQA 727
           Q+E+ NLE+    F LAEQ    I R  + L E+      RE+ L+ +  +L A
Sbjct: 102 QLEEQNLEMKEQNFRLAEQ----ITRMCQLLQEEKEEAKRREEKLKAQMEKLAA 151


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 110 KEEGEDMGDDPRKLKPGEIDPNPETKPARPDP 141
           ++EGE +  +P + KP E +P    +   P P
Sbjct: 129 QQEGETLNKEPVETKPQESEPPEMQEVTAPKP 160


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 447 AVVSVEDQADA--DARYAKEQEEKRAAE 472
           A +  ED  DA    +YAKEQ EK  AE
Sbjct: 203 ASLQKEDAVDALKQLKYAKEQAEKAVAE 230


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 447 AVVSVEDQADA--DARYAKEQEEKRAAE 472
           A +  ED  DA    +YAKEQ EK  AE
Sbjct: 203 ASLQKEDAVDALKQLKYAKEQAEKAVAE 230


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 447 AVVSVEDQADA--DARYAKEQEEKRAAE 472
           A +  ED  DA    +YAKEQ EK  AE
Sbjct: 203 ASLQKEDAVDALKQLKYAKEQAEKAVAE 230


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 447 AVVSVEDQADA--DARYAKEQEEKRAAE 472
           A +  ED  DA    +YAKEQ EK  AE
Sbjct: 203 ASLQKEDAVDALKQLKYAKEQAEKAVAE 230


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 447  AVVSVEDQADA--DARYAKEQEEKRAAE 472
            A +  ED  DA    +YAKEQ EK  AE
Sbjct: 1342 ASLQKEDAVDALKQLKYAKEQAEKAVAE 1369


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.127    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,110
Number of Sequences: 2123
Number of extensions: 21929
Number of successful extensions: 59
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 56
Number of HSP's gapped (non-prelim): 10
length of query: 751
length of database: 516,269
effective HSP length: 69
effective length of query: 682
effective length of database: 369,782
effective search space: 252191324
effective search space used: 252191324
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)