GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002481-TA|BGIBMGA002481-PA|IPR001005|Myb, DNA-binding,
IPR009057|Homeodomain-like, IPR009053|Prefoldin
         (751 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    26   1.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   2.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    24   5.2  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   6.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   9.1  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 129 DPNPETKPA-RPDPKXXXXXXXXXXSEARARLANTQGKKAKRKAREKQLEEARRL 182
           +P  ET  +  P+P+          S   A+ A   G+ +KR   E   +E +RL
Sbjct: 502 EPVVETNSSPSPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNGGETNKQELKRL 556


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 125 PGEIDPNPETKPARP 139
           PGE+D  PET+P  P
Sbjct: 287 PGEVDLPPETQPTPP 301


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 6/43 (13%)

Query: 653 VLTGGYQSRAA-ALIKQFQELQDQIEQANLELSTFKFLAEQEK 694
           V+  G Q+RA   L ++  +L+  IE+ANL +S     AE+EK
Sbjct: 422 VILVGEQARAQDGLRRRMDKLKSSIEEANLAVS-----AEREK 459


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 55  DPSIKKTEWSREEDEKLLHL 74
           +PS  +T+ S+++ E L+HL
Sbjct: 237 EPSANRTDLSKDDYESLVHL 256


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 123  LKPGEIDPNPETKPARP 139
            ++PG  D  P+ KP +P
Sbjct: 1115 IRPGTADNKPQLKPQKP 1131


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.127    0.356 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,401
Number of Sequences: 429
Number of extensions: 6802
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 6
length of query: 751
length of database: 140,377
effective HSP length: 63
effective length of query: 688
effective length of database: 113,350
effective search space: 77984800
effective search space used: 77984800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)