GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002479-TA|BGIBMGA002479-PA|undefined
         (218 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   5.4  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   9.4  

>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 41  ETLDYDPDDLHHQHLRARRSTDSQRELRL 69
           + +D D  ++H  HL+AR+   S+ +L L
Sbjct: 207 QRIDEDRLEIHVNHLQARKMLPSRPQLLL 235


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/22 (45%), Positives = 10/22 (45%)

Query: 134  GPTFVHCVLGTENTDVIYTRKI 155
            GP  VHC  G   T V  T  I
Sbjct: 1157 GPITVHCSAGVGRTGVFITLSI 1178


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,281
Number of Sequences: 2123
Number of extensions: 8339
Number of successful extensions: 64
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61
Number of HSP's gapped (non-prelim): 3
length of query: 218
length of database: 516,269
effective HSP length: 61
effective length of query: 157
effective length of database: 386,766
effective search space: 60722262
effective search space used: 60722262
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)