GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002477-TA|BGIBMGA002477-PA|undefined
         (153 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    27   0.35 
EF426176-1|ABO26419.1|  155|Anopheles gambiae unknown protein.         24   1.9  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   3.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.7  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   5.7  
EF519475-2|ABP73560.1|  177|Anopheles gambiae CTL4 protein.            22   9.9  

>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 26.6 bits (56), Expect = 0.35
 Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 4/76 (5%)

Query: 79  TTSTENSTTALKMWALERNCTKHCEPGCIV---IGERTKLYACTSCCSTSLCNYGSGAGK 135
           T  T    T   +  L++ CTK C  GC         +K   C   CS       S    
Sbjct: 43  TCGTACPNTCADLNELQKPCTKQCIQGCFCKPGFVRESKEGKCIPKCSNENMPL-SKTST 101

Query: 136 AIFFKNIVTVLILLSI 151
           AI F  +VT  + L +
Sbjct: 102 AILFVRLVTPCLYLRV 117


>EF426176-1|ABO26419.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 122 CSTSLCNYGSGAGKAIFFKNIVTVLILL 149
           C+T LCN  SG   A+   ++V V I L
Sbjct: 125 CTTELCNGASGI-TAVTLSSVVMVAIAL 151


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 98  CTKHCEPGC 106
           CTKHC  GC
Sbjct: 88  CTKHCVEGC 96


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)

Query: 112  RTKLYACTSCCSTSLCNYGSGAGKAIF 138
            R K +  T C + SLC +G    K+IF
Sbjct: 2321 REKSFLTTDCTNPSLC-HGREGTKSIF 2346


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)

Query: 112  RTKLYACTSCCSTSLCNYGSGAGKAIF 138
            R K +  T C + SLC +G    K+IF
Sbjct: 2331 REKSFLTTDCTNPSLC-HGREGTKSIF 2356


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 25  VTSAAARPNNELWCYKCL--AEVPEDKCADLRHNN 57
           V  A   P  +L CY+CL    V  D  + + H+N
Sbjct: 393 VKEAPHTPIEKLRCYRCLERGHVSRDCHSPVNHSN 427


>EF519475-2|ABP73560.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 103 EPGCIVIGERTKLYACTSC 121
           EP C+ I   T  +  TSC
Sbjct: 148 EPSCVYIQGSTMSWVATSC 166


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.133    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,858
Number of Sequences: 2123
Number of extensions: 7059
Number of successful extensions: 59
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 56
Number of HSP's gapped (non-prelim): 7
length of query: 153
length of database: 516,269
effective HSP length: 59
effective length of query: 94
effective length of database: 391,012
effective search space: 36755128
effective search space used: 36755128
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)